Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.51AWIK Arachis hypogaea HOM05D008177 ORTHO05D010128 2.3e-66 255.4 127 100.0
PRCOL_00001071 Prasinoderma coloniale HOM05D008177 ORTHO05D010128 2.7e-38 162.2 127 70.9
PRCOL_00001096 Prasinoderma coloniale HOM05D008177 ORTHO05D010128 2.7e-38 162.2 127 70.9
PRCOL_00001112 Prasinoderma coloniale HOM05D008177 ORTHO05D010128 2.7e-38 162.2 127 70.9
PRCOL_00001183 Prasinoderma coloniale HOM05D008177 ORTHO05D010128 2.7e-38 162.2 127 70.9
PRCOL_00001198 Prasinoderma coloniale HOM05D008177 ORTHO05D010128 2.7e-38 162.2 127 70.9
arahy.Tifrunner.gnm1.ann1.LHTL6D Arachis hypogaea HOM05D008177 ORTHO05D010128 5.6e-36 154.5 90 86.7
arahy.Tifrunner.gnm1.ann1.X9YRJ7 Arachis hypogaea HOM05D001828 ORTHO05D001745 3.8e-24 115.2 60 90.0
Manes.02G222401 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.18G143702 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S000327 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S002943 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S003924 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S006867 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S009156 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S010791 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S013407 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S016678 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S019294 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S020929 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S021910 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S022816 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S023016 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S023552 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S023616 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S024116 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S024216 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S024616 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S025452 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S025552 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S025816 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S025852 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S025952 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S027616 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S028252 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S028352 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S030516 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S032116 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S034316 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S035116 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S036116 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S036716 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S037016 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S038716 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S038816 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S039816 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S040016 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S040816 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S041416 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S042616 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S042916 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S043616 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S044516 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S045516 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S046816 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S047316 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S051416 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S052816 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
Manes.S054316 Manihot esculenta HOM05D008177 ORTHO05D010128 1.1e-23 113.6 53 100.0
CiPaw.05G156400 Carya illinoinensis HOM05D008177 ORTHO05D010128 4.2e-23 111.7 53 98.1
CBR_g59558 Chara braunii HOM05D007864 ORTHO05D010128 4.2e-23 111.7 75 76.0
Sc21g0003530 Simmondsia chinensis HOM05D008177 ORTHO05D010128 2.1e-22 109.4 66 81.8
Medtr0052s0110 Medicago truncatula HOM05D001828 ORTHO05D001745 6.0e-22 107.8 60 88.3
SHI06373 Sapria himalayana HOM05D000024 ORTHO05D000007 5.1e-21 104.8 66 77.3
arahy.Tifrunner.gnm1.ann1.IE4QSS Arachis hypogaea HOM05D008177 ORTHO05D010128 1.9e-20 102.8 49 95.9
CBR_g56704 Chara braunii HOM05D008177 ORTHO05D010128 5.7e-20 101.3 58 84.5
Sc14g0003600 Simmondsia chinensis HOM05D001828 ORTHO05D001745 4.5e-17 91.7 44 95.5
unitig_135.g35480 Utricularia gibba HOM05D008177 ORTHO05D010128 3.2e-15 85.5 44 93.2
Sc14g0003330 Simmondsia chinensis HOM05D007167 ORTHO05D010128 4.6e-14 81.6 48 79.2
Psat3g188680 Pisum sativum HOM05D003608 ORTHO05D010128 1.4e-13 80.1 37 100.0
FAN25G1010 Fragaria x ananassa HOM05D008177 ORTHO05D010128 2.3e-13 79.3 119 46.2
BcaC06g36786 Brassica carinata HOM05D001828 ORTHO05D010128 1.9e-12 76.3 44 84.1
Thhalv10028188m.g Eutrema salsugineum HOM05D001828 ORTHO05D001745 1.9e-12 76.3 58 72.4
Thhalv10028279m.g Eutrema salsugineum HOM05D001828 ORTHO05D001745 1.9e-12 76.3 58 72.4
CBR_g51285 Chara braunii HOM05D007864 ORTHO05D000004 2.5e-12 75.9 47 76.6
CBR_g31937 Chara braunii HOM05D007864 ORTHO05D010128 4.3e-12 75.1 39 87.2
CBR_g27903 Chara braunii HOM05D008177 ORTHO05D010128 7.4e-12 74.3 38 89.5
BcaB04g16893 Brassica carinata HOM05D003608 ORTHO05D000917 2.2e-11 72.8 33 100.0
Thhalv10028070m.g Eutrema salsugineum HOM05D001828 ORTHO05D001745 6.3e-11 71.2 82 54.9
ScUNg0001450 Simmondsia chinensis HOM05D007167 ORTHO05D001745 3.1e-10 68.9 34 97.1
Sed0007196 Sechium edule HOM05D001828 ORTHO05D001745 1.5e-09 66.6 66 56.1
LjContig00092g0015566 Lotus japonicus HOM05D001828 ORTHO05D001745 1.0e-08 63.9 37 83.8
Psat7g211960 Pisum sativum HOM05D001828 ORTHO05D001745 1.3e-08 63.5 61 59.0
CARHR143560 Cardamine hirsuta HOM05D008177 ORTHO05D010128 1.7e-08 63.2 32 87.5
ScUNg0000320 Simmondsia chinensis HOM05D007167 ORTHO05D013628 2.2e-08 62.8 57 59.6
ScUNg0000950 Simmondsia chinensis HOM05D007167 ORTHO05D000922 2.9e-08 62.4 48 62.5
Thhalv10028304m.g Eutrema salsugineum HOM05D001828 ORTHO05D001745 4.2e-07 58.5 83 47.0
unitig_807.g34420 Utricularia gibba HOM05D001029 ORTHO05D009885 7.2e-07 57.8 36 75.0
Sopen00g002240 Solanum pennellii HOM05D000691 ORTHO05D000378 1.2e-06 57.0 51 56.9
Oeu008749.1 Olea europaea HOM05D064398 ORTHO05D010128 4.7e-06 55.1 39 69.2
Sopen00g007000 Solanum pennellii HOM05D000691 ORTHO05D001745 4.7e-06 55.1 46 63.0


User provided reference genes

Program Settings