Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.5186VC Arachis hypogaea HOM05D006357 ORTHO05D007925 5.8e-98 360.9 185 100.0
arahy.Tifrunner.gnm1.ann1.JXBE2X Arachis hypogaea HOM05D006357 ORTHO05D007925 6.4e-97 357.5 185 98.9
Phvul.011G095000 Phaseolus vulgaris HOM05D006357 ORTHO05D007925 2.0e-82 309.3 182 85.7
Glyma.11G182400 Glycine max HOM05D006357 ORTHO05D007925 9.9e-82 307.0 183 84.7
VMungo1127G1055 Vigna mungo HOM05D006357 ORTHO05D007925 2.4e-80 302.4 182 83.5
Lj3g0017887 Lotus japonicus HOM05D006357 ORTHO05D007925 3.2e-80 302.0 184 83.2
MD03G1147800 Malus domestica HOM05D006357 ORTHO05D007925 5.4e-80 301.2 185 82.7
Lalb_Chr01g0004891 Lupinus albus HOM05D006357 ORTHO05D007925 1.2e-79 300.1 183 79.8
Psat7g187640 Pisum sativum HOM05D006357 ORTHO05D007925 3.0e-78 295.4 182 82.4
Prupe.6G132700 Prunus persica HOM05D006357 ORTHO05D007925 3.9e-78 295.0 185 80.0
TPR.G17225 Trifolium pratense HOM05D006357 ORTHO05D007925 8.7e-78 293.9 180 82.2
Thecc.09G281200 Theobroma cacao HOM05D006357 ORTHO05D007925 1.9e-77 292.7 185 80.5
CANSAT54G2809 Cannabis sativa HOM05D006357 ORTHO05D007925 3.3e-77 292.0 183 79.8
Cfa010003 Carpinus fangiana HOM05D006357 ORTHO05D007925 4.3e-77 291.6 185 80.0
CsaV3_6G038350 Cucumis sativus L. HOM05D006357 ORTHO05D007925 4.3e-77 291.6 182 79.1
Ca_19414_v3 Cicer arietinum L. HOM05D006357 ORTHO05D007925 7.3e-77 290.8 182 78.6
MELO3C014499.2 Cucumis melo HOM05D006357 ORTHO05D007925 7.3e-77 290.8 182 79.1
Duzib150G0376 Durio zibethinus HOM05D006357 ORTHO05D007925 9.6e-77 290.4 185 80.5
CiPaw.13G134700 Carya illinoinensis HOM05D006357 ORTHO05D007925 1.3e-76 290.0 185 81.1
ClCG02G022220 Citrullus lanatus HOM05D006357 ORTHO05D007925 1.3e-76 290.0 182 79.1
Medtr4g052840 Medicago truncatula HOM05D006357 ORTHO05D007925 1.3e-76 290.0 182 79.7
PGR119G0351 Punica granatum HOM05D006357 ORTHO05D007925 3.1e-75 285.4 186 79.6
Ca_26666_v3 Cicer arietinum L. HOM05D006357 ORTHO05D007925 6.9e-75 284.3 184 77.2
Dinv22833 Davidia involucrata HOM05D006357 ORTHO05D007925 2.6e-74 282.3 182 75.3
Eucgr.J00502 Eucalyptus grandis HOM05D006357 ORTHO05D007925 1.7e-73 279.6 185 77.8
Gohir.D08G016000 Gossypium hirsutum HOM05D006357 ORTHO05D007925 6.4e-73 277.7 184 75.0
Gorai.004G010300 Gossypium raimondii HOM05D006357 ORTHO05D007925 6.4e-73 277.7 184 75.0
Atru.chr3.3206 Acer truncatum HOM05D006357 ORTHO05D007925 1.1e-72 276.9 185 75.7
Gohir.A08G005700 Gossypium hirsutum HOM05D006357 ORTHO05D007925 1.4e-72 276.6 185 75.1
Sp5g16810 Schrenkiella parvula HOM05D006357 ORTHO05D007925 1.4e-72 276.6 185 76.2
Gorai.001G122700 Gossypium raimondii HOM05D006357 ORTHO05D007925 1.9e-72 276.2 182 76.9
QL01p012073 Quercus lobata HOM05D006357 ORTHO05D007925 1.9e-72 276.2 181 77.9
BcaB01g01165 Brassica carinata HOM05D006357 ORTHO05D007925 4.2e-72 275.0 183 76.0
Cc01_g08980 Coffea canephora HOM05D006357 ORTHO05D007925 4.2e-72 275.0 185 74.6
Gohir.D07G114400 Gossypium hirsutum HOM05D006357 ORTHO05D007925 5.4e-72 274.6 182 76.4
Atru.chr3.3208 Acer truncatum HOM05D006357 ORTHO05D007925 7.1e-72 274.2 185 75.1
SalBow3G2384 Salvia bowleyana HOM05D006357 ORTHO05D007925 7.1e-72 274.2 179 76.0
GSVIVG01036107001 Vitis vinifera HOM05D006357 ORTHO05D007925 7.1e-72 274.2 186 75.8
FvH4_3g25140 Fragaria vesca HOM05D006357 ORTHO05D007925 1.2e-71 273.5 183 75.4
QL01p012091 Quercus lobata HOM05D006357 ORTHO05D007925 1.6e-71 273.1 181 76.8
MD11G1166600 Malus domestica HOM05D006357 ORTHO05D007925 2.1e-71 272.7 181 75.7
A06p22010 Brassica napus HOM05D006357 ORTHO05D007925 2.7e-71 272.3 185 74.6
BraA06t25289Z Brassica rapa HOM05D006357 ORTHO05D007925 2.7e-71 272.3 185 74.6
FAN21G3578 Fragaria x ananassa HOM05D006357 ORTHO05D007925 3.5e-71 271.9 183 75.4
BcaC01g02047 Brassica carinata HOM05D006357 ORTHO05D007925 4.6e-71 271.6 185 74.6
C03p69190 Brassica napus HOM05D006357 ORTHO05D007925 4.6e-71 271.6 185 74.6
BolC3t19173H Brassica oleracea HOM05D006357 ORTHO05D007925 4.6e-71 271.6 185 74.6
Thhalv10010749m.g Eutrema salsugineum HOM05D006357 ORTHO05D007925 4.6e-71 271.6 185 75.1
THA.LOC104814785 Tarenaya hassleriana HOM05D006357 ORTHO05D007925 4.6e-71 271.6 184 74.5
CSS0003287 Camellia sinensis var. sinensis HOM05D006357 ORTHO05D007925 6.0e-71 271.2 185 73.0
CARHR104480 Cardamine hirsuta HOM05D006357 ORTHO05D007925 6.0e-71 271.2 183 74.9
RcHm_v2.0_Chr5g0046241 Rosa chinensis HOM05D006357 ORTHO05D007925 7.9e-71 270.8 183 74.3
Aqoxy2G01095 Aquilegia oxysepala HOM05D006357 ORTHO05D007925 2.3e-70 269.2 184 73.9
Lsat_1_v5_gn_1_59200 Lactuca sativa HOM05D006357 ORTHO05D007925 2.3e-70 269.2 181 74.6
TWI79G0514 Tripterygium wilfordii HOM05D006357 ORTHO05D007925 2.3e-70 269.2 181 73.5
AT3G44380 Arabidopsis thaliana HOM05D006357 ORTHO05D007925 3.0e-70 268.9 181 75.1
Carub.0005s1011 Capsella rubella HOM05D006357 ORTHO05D007925 3.0e-70 268.9 181 74.0
Gohir.A07G110700 Gossypium hirsutum HOM05D006357 ORTHO05D007925 3.0e-70 268.9 181 75.1
Manes.11G162800 Manihot esculenta HOM05D006357 ORTHO05D007925 3.0e-70 268.9 181 74.6
Ciclev10029363m.g Citrus clementina HOM05D006357 ORTHO05D007925 3.9e-70 268.5 185 73.5
Lj2P966T16 Lonicera japonica HOM05D006357 ORTHO05D007925 3.9e-70 268.5 185 73.5
Prupe.6G132600 Prunus persica HOM05D006357 ORTHO05D007925 1.5e-69 266.5 181 72.9
Potri.001G218400 Populus trichocarpa HOM05D006357 ORTHO05D007925 1.9e-69 266.2 186 72.0
Solyc11g068550.1 Solanum lycopersicum HOM05D006357 ORTHO05D007925 1.9e-69 266.2 178 74.2
Sopen11g027270 Solanum pennellii HOM05D006357 ORTHO05D007925 1.9e-69 266.2 178 74.2
TWI75G1708 Tripterygium wilfordii HOM05D006357 ORTHO05D007925 1.9e-69 266.2 181 73.5
Migut.N02483 Erythranthe guttata HOM05D006357 ORTHO05D007925 3.3e-69 265.4 175 74.9
Rhsim01G0204700 Rhododendron simsii HOM05D006357 ORTHO05D007925 3.3e-69 265.4 175 74.9
Sabra16G0125700 Salix brachista HOM05D006357 ORTHO05D007925 7.4e-69 264.2 186 72.6
Aa31LG4G13870 Aethionema arabicum HOM05D004825 ORTHO05D005415 9.6e-69 263.8 179 75.4
AL5G22540 Arabidopsis lyrata HOM05D006357 ORTHO05D007925 9.6e-69 263.8 181 73.5
Nitab4.5_0006120g0030 Nicotiana tabacum HOM05D006357 ORTHO05D007925 9.6e-69 263.8 176 74.4
Haze_23361 Corylus avellana HOM05D006357 ORTHO05D007925 1.3e-68 263.5 165 80.6
Hma1.2p1_0587F.1_g184180 Hydrangea macrophylla HOM05D006357 ORTHO05D007925 6.2e-68 261.2 182 69.8
Nitab4.5_0005641g0010 Nicotiana tabacum HOM05D006357 ORTHO05D007925 6.2e-68 261.2 176 73.9
MSTRG.12374 Avicennia marina HOM05D006357 ORTHO05D007925 8.1e-68 260.8 183 71.0
Actinidia37077 Actinidia chinensis HOM05D006357 ORTHO05D007925 5.3e-67 258.1 182 70.9
TAR633G1946 Trochodendron aralioides HOM05D006357 ORTHO05D007925 9.0e-67 257.3 181 71.3
Lalb_Chr03g0028161 Lupinus albus HOM05D006357 ORTHO05D007925 2.6e-66 255.8 181 71.3
HanXRQChr01g0024501 Helianthus annuus HOM05D006357 ORTHO05D007925 3.4e-66 255.4 183 69.9
unitig_699.g19178 Utricularia gibba HOM05D006357 ORTHO05D007925 7.6e-66 254.2 182 69.8
MBI01_g14623_MAGBIO Magnolia biondii HOM05D006357 ORTHO05D007925 1.3e-65 253.4 181 69.6
SGA_v2.0_scaffold177G39425 Striga asiatica HOM05D006357 ORTHO05D007925 2.2e-65 252.7 178 71.9
PSO339G3266 Papaver somniferum HOM05D006357 ORTHO05D007925 4.9e-65 251.5 183 69.4
PSO801G0234 Papaver somniferum HOM05D006357 ORTHO05D007925 6.4e-65 251.1 183 68.3
PGR102G0344 Punica granatum HOM05D006357 ORTHO05D007925 8.4e-65 250.8 181 71.3
Sed0020794 Sechium edule HOM05D006357 ORTHO05D007925 1.4e-64 250.0 176 71.6
Ah.08g215640 Amaranthus hybridus HOM05D006357 ORTHO05D007925 1.9e-64 249.6 181 69.1
FvH4_3g25160 Fragaria vesca HOM05D006357 ORTHO05D007925 7.1e-64 247.7 179 69.8
FAN25G2095 Fragaria x ananassa HOM05D006357 ORTHO05D007925 9.3e-64 247.3 179 69.8
Dinv42541 Davidia involucrata HOM05D006357 ORTHO05D007925 4.6e-63 245.0 169 72.2
Sc06g0008780 Simmondsia chinensis HOM05D006357 ORTHO05D007925 4.6e-63 245.0 182 63.7
EL10Ac7g15835 Beta vulgaris HOM05D006357 ORTHO05D007925 1.3e-62 243.4 184 65.8
Nn6g34850 Nelumbo nucifera HOM05D006357 ORTHO05D007925 3.0e-62 242.3 174 67.8
FAN11G2870 Fragaria x ananassa HOM05D006357 ORTHO05D007925 1.5e-61 240.0 172 70.3
Sc21g0007020 Simmondsia chinensis HOM05D006357 ORTHO05D007925 1.1e-59 233.8 189 65.1
Aqoxy4G02740 Aquilegia oxysepala HOM05D006357 ORTHO05D007925 9.0e-59 230.7 182 65.4
Nn6g34849 Nelumbo nucifera HOM05D006357 ORTHO05D007925 3.2e-56 222.2 185 61.1
Ah.15g095880 Amaranthus hybridus HOM05D006357 ORTHO05D007925 2.3e-54 216.1 193 58.5
AUR62009745 Chenopodium quinoa HOM05D006357 ORTHO05D007925 4.3e-53 211.8 202 55.9
DCAR_006168 Daucus carota HOM05D006357 ORTHO05D007925 1.3e-52 210.3 177 59.9
AUR62036192 Chenopodium quinoa HOM05D006357 ORTHO05D007925 3.7e-52 208.8 201 55.7
PSO384G0917 Papaver somniferum HOM05D006357 ORTHO05D007925 3.4e-50 202.2 157 65.6
PSO339G1489 Papaver somniferum HOM05D006357 ORTHO05D007925 5.9e-50 201.4 157 65.6
ECA248G3754 Erigeron canadensis HOM05D006357 ORTHO05D007925 6.5e-49 198.0 138 72.5
Os08g0558300 Oryza sativa ssp. japonica HOM05D006357 ORTHO05D007925 4.2e-48 195.3 172 57.0
AUR62036201 Chenopodium quinoa HOM05D006357 ORTHO05D007925 1.1e-45 187.2 143 67.1
RcHm_v2.0_Chr5g0046191 Rosa chinensis HOM05D006357 ORTHO05D007925 3.8e-41 172.2 121 76.0
PGSC0003DMG400026335 Solanum tuberosum HOM05D006357 ORTHO05D007925 4.2e-40 168.7 105 78.1
AagrBONN_evm.TU.Sc2ySwM_117.3687 Anthoceros agrestis HOM05D006357 ORTHO05D007925 2.3e-38 162.9 183 47.0
Mapoly0079s0020 Marchantia polymorpha HOM05D006357 ORTHO05D007925 3.3e-37 159.1 178 47.2
Cpa.g.sc195.8 Carica papaya HOM05D006357 ORTHO05D007925 3.1e-35 152.5 108 73.1
SMO347G0335 Selaginella moellendorffii HOM05D006357 ORTHO05D007925 4.1e-35 152.1 170 48.2
SEGI_40876 Sequoiadendron giganteum HOM05D006357 ORTHO05D007925 1.0e-33 147.5 175 44.6
Pp3c21_10640 Physcomitrium patens HOM05D006357 ORTHO05D007925 5.0e-33 145.2 183 44.3
ATR0820G064 Amborella trichopoda HOM05D006357 ORTHO05D007925 5.5e-32 141.7 188 43.1
Pp3c2_16750 Physcomitrium patens HOM05D006357 ORTHO05D007925 3.6e-31 139.0 188 42.0
Actinidia35469 Actinidia chinensis HOM05D006357 ORTHO05D007925 3.7e-28 129.0 90 68.9
Pp3c9_9450 Physcomitrium patens HOM05D006357 ORTHO05D007925 1.3e-25 120.6 170 38.2
AUR62036200 Chenopodium quinoa HOM05D006357 ORTHO05D007925 6.5e-25 118.2 94 61.7
ATR0820G202 Amborella trichopoda HOM05D006357 ORTHO05D007925 6.1e-23 111.7 179 41.3
AUR62044742 Chenopodium quinoa HOM05D006357 ORTHO05D007925 8.8e-22 107.8 76 72.4
ATR0820G128 Amborella trichopoda HOM05D006357 ORTHO05D007925 1.9e-16 90.1 84 58.3
Glyma.12G090400 Glycine max HOM05D006357 ORTHO05D007925 3.0e-14 82.8 48 79.2
HPP92_019617 Vanilla planifolia HOM05D003111 ORTHO05D003502 4.0e-06 55.8 162 27.2
HPP92_019623 Vanilla planifolia HOM05D003111 ORTHO05D003502 4.0e-06 55.8 162 27.2
Zm00001eb091070 Zea mays HOM05D006357 ORTHO05D007925 4.0e-06 55.8 42 59.5


User provided reference genes

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