Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.4Z5MNN Arachis hypogaea HOM05D001329 ORTHO05D004946 9.7e-52 206.5 99 100.0
arahy.Tifrunner.gnm1.ann1.B6KHKZ Arachis hypogaea HOM05D001329 ORTHO05D002618 3.2e-10 68.6 138 37.0
arahy.Tifrunner.gnm1.ann1.KL0FMA Arachis hypogaea HOM05D001329 ORTHO05D002618 3.2e-10 68.6 138 37.0
TPR.G15143 Trifolium pratense HOM05D001329 ORTHO05D004946 4.1e-10 68.2 138 37.0
Lj3g0020598 Lotus japonicus HOM05D001329 ORTHO05D004946 2.7e-09 65.5 138 36.2
Phvul.010G143800 Phaseolus vulgaris HOM05D001329 ORTHO05D004946 3.5e-09 65.1 138 36.2
VMungo0331G1514 Vigna mungo HOM05D001329 ORTHO05D004946 3.5e-09 65.1 138 36.2
Lalb_Chr04g0263001 Lupinus albus HOM05D001329 ORTHO05D004946 4.6e-09 64.7 138 35.5
Ca_23279_v3 Cicer arietinum L. HOM05D001329 ORTHO05D004946 1.0e-08 63.5 138 35.5
Medtr8g014670 Medicago truncatula HOM05D001329 ORTHO05D004946 1.0e-08 63.5 138 35.5
Psat4g196800 Pisum sativum HOM05D001329 ORTHO05D004946 1.0e-08 63.5 138 35.5
Zm00001eb270700 Zea mays HOM05D001329 ORTHO05D004946 1.7e-08 62.8 59 57.6
Eucgr.J02692 Eucalyptus grandis HOM05D001329 ORTHO05D004946 3.9e-08 61.6 138 34.1
Eucgr.J02926 Eucalyptus grandis HOM05D001329 ORTHO05D004946 3.9e-08 61.6 138 34.1
AagrBONN_evm.TU.Sc2ySwM_340.358 Anthoceros agrestis HOM05D001329 ORTHO05D004946 6.6e-08 60.8 64 48.4
DCAR_007591 Daucus carota HOM05D001329 ORTHO05D004946 6.6e-08 60.8 112 34.8
CBR_g52747 Chara braunii HOM05D001329 ORTHO05D004946 8.6e-08 60.5 53 56.6
FAN14G3013 Fragaria x ananassa HOM05D001329 ORTHO05D004946 8.6e-08 60.5 91 40.7
Rhsim08G0228700 Rhododendron simsii HOM05D001329 ORTHO05D004946 8.6e-08 60.5 40 75.0
Dinv30424 Davidia involucrata HOM05D001329 ORTHO05D004946 1.1e-07 60.1 40 75.0
Glyma.08G199700 Glycine max HOM05D001329 ORTHO05D004946 1.1e-07 60.1 40 75.0
Mapoly0008s0091 Marchantia polymorpha HOM05D001329 ORTHO05D004946 1.1e-07 60.1 53 52.8
SEGI_18109 Sequoiadendron giganteum HOM05D001329 ORTHO05D004946 1.1e-07 60.1 40 75.0
Lalb_Chr24g0396201 Lupinus albus HOM05D001329 ORTHO05D004946 1.9e-07 59.3 40 72.5
GSVIVG01016954001 Vitis vinifera HOM05D001329 ORTHO05D004946 1.9e-07 59.3 40 75.0
Haze_15869 Corylus avellana HOM05D001329 ORTHO05D004946 2.5e-07 58.9 40 75.0
Haze_15873 Corylus avellana HOM05D001329 ORTHO05D004946 2.5e-07 58.9 40 75.0
Migut.I00963 Erythranthe guttata HOM05D001329 ORTHO05D004946 2.5e-07 58.9 40 72.5
MCO02G474 Micromonas commoda HOM05D001329 ORTHO05D004946 2.5e-07 58.9 47 61.7
CAN.G1143.24 Capsicum annuum HOM05D001329 ORTHO05D004946 3.3e-07 58.5 40 72.5
CiPaw.01G230000 Carya illinoinensis HOM05D001329 ORTHO05D004946 3.3e-07 58.5 40 72.5
Cc04_g02430 Coffea canephora HOM05D001329 ORTHO05D004946 3.3e-07 58.5 39 74.4
Lj9C514G19 Lonicera japonica HOM05D001329 ORTHO05D004946 3.3e-07 58.5 39 76.9
Nitab4.5_0004969g0080 Nicotiana tabacum HOM05D001329 ORTHO05D004946 3.3e-07 58.5 40 72.5
Nitab4.5_0005085g0040 Nicotiana tabacum HOM05D001329 ORTHO05D004946 3.3e-07 58.5 40 72.5
Peaxi162Scf00038g01146 Petunia axillaris HOM05D001329 ORTHO05D004946 3.3e-07 58.5 40 72.5
Pp3c1_36770 Physcomitrium patens HOM05D001329 ORTHO05D004946 3.3e-07 58.5 53 50.9
Hund07630 Selenicereus undatus HOM05D001329 ORTHO05D004946 3.3e-07 58.5 40 72.5
Solyc03g121120.4 Solanum lycopersicum HOM05D001329 ORTHO05D004946 3.3e-07 58.5 40 72.5
Sopen03g039950 Solanum pennellii HOM05D001329 ORTHO05D004946 3.3e-07 58.5 40 72.5
PGSC0003DMG400002521 Solanum tuberosum HOM05D001329 ORTHO05D004946 3.3e-07 58.5 40 72.5
Aqoxy7G03959 Aquilegia oxysepala HOM05D001329 ORTHO05D004946 4.3e-07 58.2 27 96.3
Glyma.15G021000 Glycine max HOM05D001329 ORTHO05D004946 4.3e-07 58.2 27 96.3
MD17G1180500 Malus domestica HOM05D001329 ORTHO05D004946 4.3e-07 58.2 27 96.3
PSO782G0993 Papaver somniferum HOM05D001329 ORTHO05D004946 4.3e-07 58.2 40 72.5
Prupe.3G056500 Prunus persica HOM05D001329 ORTHO05D004946 4.3e-07 58.2 27 96.3
vmacro18841 Vaccinium macrocarpon HOM05D001329 ORTHO05D004946 4.3e-07 58.2 29 89.7
CSS0049032 Camellia sinensis var. sinensis HOM05D001329 ORTHO05D004946 5.6e-07 57.8 39 74.4
Ca_01173_v3 Cicer arietinum L. HOM05D001329 ORTHO05D004946 5.6e-07 57.8 40 70.0
Lj3g0004043 Lotus japonicus HOM05D001329 ORTHO05D004946 5.6e-07 57.8 27 96.3
Medtr2g100640 Medicago truncatula HOM05D001329 ORTHO05D004946 5.6e-07 57.8 40 70.0
Os06g0151600 Oryza sativa ssp. japonica HOM05D001329 ORTHO05D004946 5.6e-07 57.8 33 84.8
Potri.001G191200 Populus trichocarpa HOM05D001329 ORTHO05D004946 5.6e-07 57.8 40 72.5
TPR.G6578 Trifolium pratense HOM05D001329 ORTHO05D004946 5.6e-07 57.8 40 70.0
TWI18G0587 Tripterygium wilfordii HOM05D001329 ORTHO05D004946 5.6e-07 57.8 40 72.5
GSVIVG01016953001 Vitis vinifera HOM05D001329 ORTHO05D004946 5.6e-07 57.8 40 72.5
CANSAT56G2668 Cannabis sativa HOM05D001329 ORTHO05D004946 7.3e-07 57.4 40 70.0
FAN05G0851 Fragaria x ananassa HOM05D001329 ORTHO05D004946 7.3e-07 57.4 40 75.0
MBI02_g35318_MAGBIO Magnolia biondii HOM05D001329 ORTHO05D004946 7.3e-07 57.4 40 70.0
TAR626G1508 Trochodendron aralioides HOM05D001329 ORTHO05D004946 7.3e-07 57.4 40 70.0
TAR626G1659 Trochodendron aralioides HOM05D001329 ORTHO05D004946 7.3e-07 57.4 40 70.0
Ciclev10025165m.g Citrus clementina HOM05D001329 ORTHO05D004946 9.5e-07 57.0 39 71.8
ECA232G1252 Erigeron canadensis HOM05D001329 ORTHO05D004946 9.5e-07 57.0 33 81.8
HanXRQChr05g0139791 Helianthus annuus HOM05D001329 ORTHO05D004946 9.5e-07 57.0 33 81.8
Lsat_1_v5_gn_4_98041 Lactuca sativa HOM05D001329 ORTHO05D004946 9.5e-07 57.0 33 81.8
Manes.11G031600 Manihot esculenta HOM05D001329 ORTHO05D004946 9.5e-07 57.0 27 92.6
PSO478G0947 Papaver somniferum HOM05D001329 ORTHO05D004946 9.5e-07 57.0 40 70.0
Thecc.06G102200 Theobroma cacao HOM05D001329 ORTHO05D004946 9.5e-07 57.0 40 67.5
Actinidia32112 Actinidia chinensis HOM05D001329 ORTHO05D004946 1.2e-06 56.6 26 96.2
Aa31LG3G5830 Aethionema arabicum HOM05D001329 ORTHO05D004946 1.2e-06 56.6 27 88.9
BcaB01g02899 Brassica carinata HOM05D001329 ORTHO05D004946 1.2e-06 56.6 27 88.9
BcaC01g04813 Brassica carinata HOM05D001329 ORTHO05D004946 1.2e-06 56.6 27 88.9
A03p27790 Brassica napus HOM05D001329 ORTHO05D004946 1.2e-06 56.6 27 88.9
C03p33520 Brassica napus HOM05D001329 ORTHO05D004946 1.2e-06 56.6 27 88.9
BolC3t15673H Brassica oleracea HOM05D001329 ORTHO05D004946 1.2e-06 56.6 27 88.9
BraA03t11990Z Brassica rapa HOM05D001329 ORTHO05D004946 1.2e-06 56.6 27 88.9
Thhalv10013055m.g Eutrema salsugineum HOM05D001329 ORTHO05D004946 1.2e-06 56.6 27 88.9
Phvul.005G165000 Phaseolus vulgaris HOM05D001329 ORTHO05D004946 1.2e-06 56.6 27 92.6
Sabra01G0150400 Salix brachista HOM05D001329 ORTHO05D004946 1.2e-06 56.6 40 70.0
Sp6g12440 Schrenkiella parvula HOM05D001329 ORTHO05D004946 1.2e-06 56.6 27 88.9
THA.LOC104803142 Tarenaya hassleriana HOM05D001329 ORTHO05D004946 1.2e-06 56.6 27 88.9
unitig_88.g27600 Utricularia gibba HOM05D001329 ORTHO05D004946 1.2e-06 56.6 40 70.0
Psat5g239480 Pisum sativum HOM05D001329 ORTHO05D004946 1.6e-06 56.2 40 67.5
Psat5g295200 Pisum sativum HOM05D001329 ORTHO05D004946 1.6e-06 56.2 40 67.5
Atru.chr1.3485 Acer truncatum HOM05D001329 ORTHO05D004946 2.1e-06 55.8 40 67.5
arahy.Tifrunner.gnm1.ann1.V5Z0HR Arachis hypogaea HOM05D001329 ORTHO05D004946 2.1e-06 55.8 40 65.0
ClCG07G013420 Citrullus lanatus HOM05D001329 ORTHO05D004946 2.1e-06 55.8 40 67.5
ClCG07G013460 Citrullus lanatus HOM05D001329 ORTHO05D004946 2.1e-06 55.8 40 67.5
Gohir.A10G064700 Gossypium hirsutum HOM05D001329 ORTHO05D004946 2.1e-06 55.8 39 69.2
Gohir.D10G066200 Gossypium hirsutum HOM05D001329 ORTHO05D004946 2.1e-06 55.8 39 69.2
Gorai.011G070300 Gossypium raimondii HOM05D001329 ORTHO05D004946 2.1e-06 55.8 39 69.2
Nn8g39015 Nelumbo nucifera HOM05D001329 ORTHO05D004946 2.1e-06 55.8 27 88.9
PGR102G1644 Punica granatum HOM05D001329 ORTHO05D004946 2.1e-06 55.8 40 67.5
QL05p019057 Quercus lobata HOM05D001329 ORTHO05D004946 2.1e-06 55.8 33 78.8
ATR0705G162 Amborella trichopoda HOM05D001329 ORTHO05D004946 2.8e-06 55.5 27 88.9
AL8G24420 Arabidopsis lyrata HOM05D001329 ORTHO05D004946 2.8e-06 55.5 27 85.2
AT5G50340 Arabidopsis thaliana HOM05D001329 ORTHO05D004946 2.8e-06 55.5 27 85.2
Carub.0008s1040 Capsella rubella HOM05D001329 ORTHO05D004946 2.8e-06 55.5 27 85.2
CDE02G2442 Ceratophyllum demersum HOM05D001329 ORTHO05D004946 2.8e-06 55.5 27 88.9
FvH4_6g32620 Fragaria vesca HOM05D001329 ORTHO05D004946 2.8e-06 55.5 40 70.0
Oeu063750.1 Olea europaea HOM05D001329 ORTHO05D004946 2.8e-06 55.5 39 69.2
Ah.01g017270 Amaranthus hybridus HOM05D001329 ORTHO05D004946 3.6e-06 55.1 27 92.6
Ah.16g103270 Amaranthus hybridus HOM05D001329 ORTHO05D004946 3.6e-06 55.1 27 92.6
SGA_v2.0_scaffold265G46056 Striga asiatica HOM05D001329 ORTHO05D004946 3.6e-06 55.1 28 85.7
VMungo1080G1498 Vigna mungo HOM05D001329 ORTHO05D004946 3.6e-06 55.1 27 88.9
AUR62022260 Chenopodium quinoa HOM05D001329 ORTHO05D004946 6.2e-06 54.3 27 88.9
Sed0006591 Sechium edule HOM05D001329 ORTHO05D004946 6.2e-06 54.3 27 85.2
EL10Ac9g21183 Beta vulgaris HOM05D001329 ORTHO05D004946 8.1e-06 53.9 27 88.9
COL.COLO4_30535 Corchorus olitorius HOM05D001329 ORTHO05D004946 8.1e-06 53.9 39 66.7


User provided reference genes

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