Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.4Z2V5Y Arachis hypogaea HOM05D000626 ORTHO05D003868 1.0e-27 125.9 62 100.0
arahy.Tifrunner.gnm1.ann1.FT0TL2 Arachis hypogaea HOM05D000626 ORTHO05D003868 5.7e-26 120.2 61 95.1
arahy.Tifrunner.gnm1.ann1.9EQ5HC Arachis hypogaea HOM05D000626 ORTHO05D003868 1.7e-25 118.6 61 93.4
arahy.Tifrunner.gnm1.ann1.ZIS5WG Arachis hypogaea HOM05D000626 ORTHO05D003868 1.4e-24 115.5 61 90.2
arahy.Tifrunner.gnm1.ann1.AWJJ40 Arachis hypogaea HOM05D000626 ORTHO05D086417 6.6e-14 80.1 42 88.1
arahy.Tifrunner.gnm1.ann1.61JD7D Arachis hypogaea HOM05D000626 ORTHO05D003868 5.2e-11 70.5 35 91.4
arahy.Tifrunner.gnm1.ann1.GNS53T Arachis hypogaea HOM05D000626 ORTHO05D003868 6.8e-11 70.1 33 97.0
arahy.Tifrunner.gnm1.ann1.NL7PFA Arachis hypogaea HOM05D000626 ORTHO05D003868 6.8e-11 70.1 33 97.0
MD05G1070400 Malus domestica HOM05D000626 ORTHO05D003868 1.5e-10 68.9 33 93.9
QL11p042537 Quercus lobata HOM05D000626 ORTHO05D003868 2.0e-10 68.6 33 97.0
CiPaw.05G061300 Carya illinoinensis HOM05D000626 ORTHO05D003868 4.4e-10 67.4 33 93.9
Lalb_Chr01g0002691 Lupinus albus HOM05D000626 ORTHO05D003868 4.4e-10 67.4 33 93.9
Lalb_Chr03g0025801 Lupinus albus HOM05D000626 ORTHO05D003868 4.4e-10 67.4 33 93.9
MD10G1081300 Malus domestica HOM05D000626 ORTHO05D003868 4.4e-10 67.4 33 90.9
VMungo1127G0953 Vigna mungo HOM05D000626 ORTHO05D003868 5.8e-10 67.0 33 90.9
Glyma.11G120300 Glycine max HOM05D000626 ORTHO05D003868 7.5e-10 66.6 33 93.9
Phvul.011G047300 Phaseolus vulgaris HOM05D000626 ORTHO05D003868 7.5e-10 66.6 33 93.9
RcHm_v2.0_Chr6g0262991 Rosa chinensis HOM05D000626 ORTHO05D003868 9.8e-10 66.2 33 87.9
Haze_02415 Corylus avellana HOM05D000626 ORTHO05D003868 1.3e-09 65.9 33 90.9
Ca_20850_v3 Cicer arietinum L. HOM05D000626 ORTHO05D003868 1.7e-09 65.5 33 87.9
Glyma.12G045400 Glycine max HOM05D000626 ORTHO05D003868 1.7e-09 65.5 33 90.9
Medtr4g069240 Medicago truncatula HOM05D000626 ORTHO05D003868 1.7e-09 65.5 33 87.9
Psat7g141000 Pisum sativum HOM05D000626 ORTHO05D003868 1.7e-09 65.5 33 87.9
TPR.G28529 Trifolium pratense HOM05D000626 ORTHO05D003868 1.7e-09 65.5 33 87.9
TWI31G0747 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 1.7e-09 65.5 33 90.9
Prupe.8G102600 Prunus persica HOM05D000626 ORTHO05D003868 2.2e-09 65.1 33 90.9
Duzib052G0942 Durio zibethinus HOM05D000626 ORTHO05D003868 2.9e-09 64.7 33 90.9
Sed0006655 Sechium edule HOM05D000626 ORTHO05D003868 2.9e-09 64.7 33 87.9
FvH4_2g08200 Fragaria vesca HOM05D000626 ORTHO05D003868 3.7e-09 64.3 33 84.8
FAN15G2364 Fragaria x ananassa HOM05D000626 ORTHO05D003868 3.7e-09 64.3 33 84.8
FAN20G2380 Fragaria x ananassa HOM05D000626 ORTHO05D003868 3.7e-09 64.3 33 84.8
FAN24G1839 Fragaria x ananassa HOM05D000626 ORTHO05D003868 3.7e-09 64.3 33 84.8
FAN27G0454 Fragaria x ananassa HOM05D000626 ORTHO05D003868 3.7e-09 64.3 33 84.8
Sed0005165 Sechium edule HOM05D000626 ORTHO05D003868 3.7e-09 64.3 33 87.9
Cpa.g.sc62.112 Carica papaya HOM05D000626 ORTHO05D003868 6.4e-09 63.5 33 87.9
Atru.chr5.2949 Acer truncatum HOM05D000626 ORTHO05D003868 8.3e-09 63.2 33 84.8
ClCG09G017810 Citrullus lanatus HOM05D000626 ORTHO05D003868 1.1e-08 62.8 33 84.8
Ciclev10028484m.g Citrus clementina HOM05D000626 ORTHO05D003868 1.1e-08 62.8 33 84.8
COL.COLO4_32455 Corchorus olitorius HOM05D000626 ORTHO05D003868 1.1e-08 62.8 33 87.9
MELO3C021946.2 Cucumis melo HOM05D000626 ORTHO05D003868 1.1e-08 62.8 33 84.8
CsaV3_2G014400 Cucumis sativus L. HOM05D000626 ORTHO05D003868 1.1e-08 62.8 33 84.8
Duzib132G0298 Durio zibethinus HOM05D000626 ORTHO05D003868 1.1e-08 62.8 33 87.9
Eucgr.G01893 Eucalyptus grandis HOM05D000626 ORTHO05D003868 1.1e-08 62.8 33 84.8
Gohir.D04G159100 Gossypium hirsutum HOM05D000626 ORTHO05D003868 1.1e-08 62.8 33 87.9
Gorai.012G146500 Gossypium raimondii HOM05D000626 ORTHO05D003868 1.1e-08 62.8 33 87.9
PGR042G1683 Punica granatum HOM05D000626 ORTHO05D003868 1.9e-08 62.0 33 84.8
Gohir.A04G117400 Gossypium hirsutum HOM05D000626 ORTHO05D003868 3.2e-08 61.2 33 84.8
Thecc.02G122300 Theobroma cacao HOM05D000626 ORTHO05D003868 3.2e-08 61.2 33 84.8
Lj3g0026150 Lotus japonicus HOM05D000626 ORTHO05D003868 4.1e-08 60.8 33 81.8
Thecc.08G195700 Theobroma cacao HOM05D000626 ORTHO05D003868 5.4e-08 60.5 33 84.8
Gohir.A13G048600 Gossypium hirsutum HOM05D000626 ORTHO05D003868 9.2e-08 59.7 33 81.8
Gohir.D13G047000 Gossypium hirsutum HOM05D000626 ORTHO05D003868 9.2e-08 59.7 33 81.8
Manes.15G148600 Manihot esculenta HOM05D000626 ORTHO05D003868 1.2e-07 59.3 33 84.8
CDE01G0575 Ceratophyllum demersum HOM05D000626 ORTHO05D003868 1.6e-07 58.9 33 75.8
Mapoly0103s0006 Marchantia polymorpha HOM05D000626 ORTHO05D003868 1.6e-07 58.9 33 81.8
PSO541G5997 Papaver somniferum HOM05D000626 ORTHO05D003868 1.6e-07 58.9 33 75.8
PSO675G2926 Papaver somniferum HOM05D000626 ORTHO05D003868 1.6e-07 58.9 33 75.8
MSTRG.16792 Avicennia marina HOM05D000626 ORTHO05D003868 2.1e-07 58.5 33 81.8
Nitab4.5_0000199g0010 Nicotiana tabacum HOM05D000626 ORTHO05D003868 2.1e-07 58.5 33 78.8
Nitab4.5_0022318g0010 Nicotiana tabacum HOM05D000626 ORTHO05D003868 2.1e-07 58.5 33 78.8
Hund06221 Selenicereus undatus HOM05D000626 ORTHO05D003868 2.1e-07 58.5 33 81.8
HPP92_010187 Vanilla planifolia HOM05D000626 ORTHO05D003868 2.1e-07 58.5 33 78.8
Actinidia00502 Actinidia chinensis HOM05D000626 ORTHO05D003868 2.7e-07 58.2 33 75.8
CAN.G322.113 Capsicum annuum HOM05D000626 ORTHO05D003868 3.5e-07 57.8 33 78.8
CDE02G0645 Ceratophyllum demersum HOM05D000626 ORTHO05D003868 3.5e-07 57.8 33 75.8
Peaxi162Scf00684g00567 Petunia axillaris HOM05D000626 ORTHO05D003868 3.5e-07 57.8 33 78.8
Sc18g0004660 Simmondsia chinensis HOM05D000626 ORTHO05D003868 4.6e-07 57.4 33 75.8
unitig_37.g12815 Utricularia gibba HOM05D000626 ORTHO05D003868 4.6e-07 57.4 33 75.8
Aa31LG1G15220 Aethionema arabicum HOM05D000626 ORTHO05D003868 6.0e-07 57.0 33 72.7
AL8G44800 Arabidopsis lyrata HOM05D000626 ORTHO05D003868 6.0e-07 57.0 33 72.7
AT5G66680 Arabidopsis thaliana HOM05D000626 ORTHO05D003868 6.0e-07 57.0 33 72.7
BcaB02g10001 Brassica carinata HOM05D000626 ORTHO05D003868 6.0e-07 57.0 33 72.7
BcaB04g20111 Brassica carinata HOM05D000626 ORTHO05D003868 6.0e-07 57.0 33 72.7
BcaC03g18407 Brassica carinata HOM05D000626 ORTHO05D003868 6.0e-07 57.0 33 72.7
BcaC04g23148 Brassica carinata HOM05D000626 ORTHO05D003868 6.0e-07 57.0 33 72.7
BcaC06g34731 Brassica carinata HOM05D000626 ORTHO05D003868 6.0e-07 57.0 33 72.7
A07p17280 Brassica napus HOM05D000626 ORTHO05D003868 6.0e-07 57.0 33 72.7
A09p09850 Brassica napus HOM05D000626 ORTHO05D003868 6.0e-07 57.0 33 72.7
C07p25140 Brassica napus HOM05D000626 ORTHO05D003868 6.0e-07 57.0 33 72.7
C09p11660 Brassica napus HOM05D000626 ORTHO05D003868 6.0e-07 57.0 33 72.7
BolC9t54060H Brassica oleracea HOM05D000626 ORTHO05D003868 6.0e-07 57.0 33 72.7
BraA07t29454Z Brassica rapa HOM05D000626 ORTHO05D003868 6.0e-07 57.0 33 72.7
BraA09t36632Z Brassica rapa HOM05D000626 ORTHO05D003868 6.0e-07 57.0 33 72.7
Carub.0008s2782 Capsella rubella HOM05D000626 ORTHO05D003868 6.0e-07 57.0 33 72.7
CARHR281040 Cardamine hirsuta HOM05D000626 ORTHO05D003868 6.0e-07 57.0 33 72.7
AUR62011357 Chenopodium quinoa HOM05D000626 ORTHO05D003868 6.0e-07 57.0 33 75.8
Thhalv10004242m.g Eutrema salsugineum HOM05D000626 ORTHO05D003868 6.0e-07 57.0 33 72.7
Potri.005G127000 Populus trichocarpa HOM05D000626 ORTHO05D003868 6.0e-07 57.0 33 75.8
Potri.007G031000 Populus trichocarpa HOM05D000626 ORTHO05D003868 6.0e-07 57.0 33 75.8
Sabra07G0026800 Salix brachista HOM05D000626 ORTHO05D003868 6.0e-07 57.0 33 75.8
Sp2g30020 Schrenkiella parvula HOM05D000626 ORTHO05D003868 6.0e-07 57.0 33 72.7
Solyc01g109410.4 Solanum lycopersicum HOM05D000626 ORTHO05D003868 6.0e-07 57.0 33 75.8
Sopen01g051600 Solanum pennellii HOM05D000626 ORTHO05D003868 6.0e-07 57.0 33 75.8
Ah.03g139660 Amaranthus hybridus HOM05D000626 ORTHO05D003868 7.8e-07 56.6 33 72.7
Aqoxy6G01025 Aquilegia oxysepala HOM05D000626 ORTHO05D003868 7.8e-07 56.6 33 72.7
ATR0733G160 Amborella trichopoda HOM05D000626 ORTHO05D003868 1.0e-06 56.2 33 75.8
Dinv23553 Davidia involucrata HOM05D000626 ORTHO05D003868 1.3e-06 55.8 33 75.8
Nitab4.5_0008989g0040 Nicotiana tabacum HOM05D000626 ORTHO05D003868 1.7e-06 55.5 33 72.7
SMO358G0537 Selaginella moellendorffii HOM05D000626 ORTHO05D003868 1.7e-06 55.5 33 75.8
SGA_v2.0_scaffold33G13424 Striga asiatica HOM05D000626 ORTHO05D003868 1.7e-06 55.5 33 72.7
EL10Ac6g14893 Beta vulgaris HOM05D000626 ORTHO05D003868 2.3e-06 55.1 33 69.7
Dinv39947 Davidia involucrata HOM05D000626 ORTHO05D003868 2.3e-06 55.1 43 62.8
THA.LOC104819216 Tarenaya hassleriana HOM05D000626 ORTHO05D003868 2.3e-06 55.1 33 72.7
TAR376G0372 Trochodendron aralioides HOM05D000626 ORTHO05D003868 3.0e-06 54.7 33 75.8
MSTRG.23557 Avicennia marina HOM05D000626 ORTHO05D003868 3.9e-06 54.3 33 69.7
EL10Ac9g21756 Beta vulgaris HOM05D000626 ORTHO05D003868 3.9e-06 54.3 33 75.8
Hma1.2p1_0066F.1_g036710 Hydrangea macrophylla HOM05D000626 ORTHO05D003868 3.9e-06 54.3 33 72.7
Oeu032561.1 Olea europaea HOM05D000626 ORTHO05D003868 3.9e-06 54.3 33 72.7
Oeu035116.1 Olea europaea HOM05D000626 ORTHO05D003868 3.9e-06 54.3 33 72.7
Peaxi162Scf00016g00944 Petunia axillaris HOM05D000626 ORTHO05D003868 3.9e-06 54.3 33 72.7
SGA_v2.0_scaffold276G46656 Striga asiatica HOM05D000626 ORTHO05D003868 3.9e-06 54.3 33 69.7
vmacro02136 Vaccinium macrocarpon HOM05D000626 ORTHO05D003868 3.9e-06 54.3 33 69.7
Atru.chr3.513 Acer truncatum HOM05D000626 ORTHO05D003868 5.1e-06 53.9 33 69.7
AagrBONN_evm.TU.Sc2ySwM_117.2383 Anthoceros agrestis HOM05D000626 ORTHO05D003868 5.1e-06 53.9 33 75.8
BcaB07g29659 Brassica carinata HOM05D000626 ORTHO05D003868 5.1e-06 53.9 33 69.7
Pp3c24_6930 Physcomitrium patens HOM05D000626 ORTHO05D003868 5.1e-06 53.9 33 72.7
GSVIVG01019024001 Vitis vinifera HOM05D000626 ORTHO05D003868 5.1e-06 53.9 33 72.7
AUR62003200 Chenopodium quinoa HOM05D000626 ORTHO05D003868 6.6e-06 53.5 33 66.7
AUR62008017 Chenopodium quinoa HOM05D000626 ORTHO05D003868 6.6e-06 53.5 33 66.7
Dinv26800 Davidia involucrata HOM05D000626 ORTHO05D003868 6.6e-06 53.5 44 59.1
GSVIVG01031917001 Vitis vinifera HOM05D000626 ORTHO05D003868 6.6e-06 53.5 33 69.7
Actinidia36541 Actinidia chinensis HOM05D000626 ORTHO05D003868 8.6e-06 53.1 33 69.7


User provided reference genes

Program Settings