Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.4Y102Q Arachis hypogaea HOM05D000751 ORTHO05D005618 0.0e+00 1098.2 544 100.0
arahy.Tifrunner.gnm1.ann1.QPM7FK Arachis hypogaea HOM05D000751 ORTHO05D005618 1.5e-303 1045.4 571 92.3
Glyma.09G057700 Glycine max HOM05D000751 ORTHO05D005618 1.0e-243 846.7 611 72.3
Lalb_Chr02g0148081 Lupinus albus HOM05D000751 ORTHO05D005618 8.4e-238 827.0 609 70.9
VMungo1309G0231 Vigna mungo HOM05D000751 ORTHO05D005618 4.1e-237 824.7 610 70.8
Lj6g0015551 Lotus japonicus HOM05D000751 ORTHO05D005618 3.0e-227 792.0 611 68.2
Phvul.009G238100 Phaseolus vulgaris HOM05D000751 ORTHO05D005618 5.1e-227 791.2 609 68.6
TPR.G9024 Trifolium pratense HOM05D000751 ORTHO05D005618 1.9e-226 789.3 612 68.0
Medtr2g036890 Medicago truncatula HOM05D000751 ORTHO05D005618 1.3e-211 740.0 614 64.5
Medtr2g012650 Medicago truncatula HOM05D000751 ORTHO05D005618 5.1e-211 738.0 612 64.4
GSVIVG01010908001 Vitis vinifera HOM05D000751 ORTHO05D005618 4.2e-189 665.2 615 57.4
Cfa016755 Carpinus fangiana HOM05D000751 ORTHO05D005618 2.6e-186 656.0 620 57.3
TAR636G3589 Trochodendron aralioides HOM05D000751 ORTHO05D005618 5.7e-186 654.8 645 55.8
CiPaw.14G110300 Carya illinoinensis HOM05D000751 ORTHO05D005618 1.8e-184 649.8 627 56.9
Nn8g40996 Nelumbo nucifera HOM05D000751 ORTHO05D005618 4.5e-183 645.2 599 56.3
Sed0012322 Sechium edule HOM05D000751 ORTHO05D005618 2.2e-182 642.9 616 55.4
MELO3C017440.2 Cucumis melo HOM05D000751 ORTHO05D005618 1.4e-181 640.2 607 56.2
CsaV3_1G031770 Cucumis sativus L. HOM05D000751 ORTHO05D005618 1.2e-180 637.1 609 56.3
Aqoxy2G02196 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 3.6e-180 635.6 619 55.3
RcHm_v2.0_Chr4g0400251 Rosa chinensis HOM05D000751 ORTHO05D005618 1.5e-178 630.2 596 56.0
Ciclev10030781m.g Citrus clementina HOM05D000751 ORTHO05D005618 3.3e-178 629.0 617 54.6
Actinidia06357 Actinidia chinensis HOM05D000751 ORTHO05D005618 9.7e-178 627.5 599 56.1
CSS0048015 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D005618 3.7e-177 625.5 601 54.7
PSO017G1776 Papaver somniferum HOM05D000751 ORTHO05D005618 1.1e-176 624.0 586 55.5
PSO478G0715 Papaver somniferum HOM05D000751 ORTHO05D005618 1.4e-176 623.6 594 54.7
Manes.17G002500 Manihot esculenta HOM05D000751 ORTHO05D005618 5.3e-176 621.7 621 53.8
CANSAT11G2085 Cannabis sativa HOM05D000751 ORTHO05D005618 1.0e-174 617.5 582 55.7
Prupe.1G079600 Prunus persica HOM05D000751 ORTHO05D005618 1.0e-174 617.5 626 54.8
Hma1.2p1_0207F.1_g087810 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.3e-174 617.1 608 55.1
FvH4_4g07640 Fragaria vesca HOM05D000751 ORTHO05D005618 2.2e-174 616.3 596 54.5
Cc06_g22130 Coffea canephora HOM05D000751 ORTHO05D005618 2.5e-173 612.8 569 56.6
Gorai.009G003500 Gossypium raimondii HOM05D000751 ORTHO05D005618 4.2e-173 612.1 609 54.7
Potri.003G010000 Populus trichocarpa HOM05D000751 ORTHO05D005618 4.2e-173 612.1 602 54.3
TWI38G2172 Tripterygium wilfordii HOM05D000751 ORTHO05D005618 1.2e-172 610.5 615 53.8
Eucgr.A01411 Eucalyptus grandis HOM05D000751 ORTHO05D005618 2.7e-172 609.4 606 53.6
Gohir.D05G003900 Gossypium hirsutum HOM05D000751 ORTHO05D005618 6.7e-171 604.7 607 54.7
Atru.chr11.2504 Acer truncatum HOM05D000751 ORTHO05D005618 5.7e-170 601.7 613 53.0
MBI16_g18209_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 5.7e-170 601.7 624 53.7
FAN17G2112 Fragaria x ananassa HOM05D000751 ORTHO05D005618 2.8e-169 599.4 617 52.5
Peaxi162Scf00324g00731 Petunia axillaris HOM05D000751 ORTHO05D005618 4.8e-169 598.6 602 53.5
Gohir.A05G003500 Gossypium hirsutum HOM05D000751 ORTHO05D005618 6.3e-169 598.2 612 54.1
Thecc.09G180200 Theobroma cacao HOM05D000751 ORTHO05D005618 1.1e-168 597.4 615 53.7
THA.LOC104813512 Tarenaya hassleriana HOM05D000751 ORTHO05D005618 1.4e-168 597.0 599 53.8
Cpa.g.sc86.27 Carica papaya HOM05D000751 ORTHO05D005618 1.6e-167 593.6 621 52.0
Sc06g0007900 Simmondsia chinensis HOM05D000751 ORTHO05D005618 2.7e-167 592.8 546 56.4
ECA240G3678 Erigeron canadensis HOM05D000751 ORTHO05D005618 4.5e-167 592.0 577 54.6
EL10Ac2g02594 Beta vulgaris HOM05D000751 ORTHO05D005618 7.7e-167 591.3 626 51.4
Nitab4.5_0000074g0030 Nicotiana tabacum HOM05D000751 ORTHO05D005618 7.7e-167 591.3 614 52.0
FAN07G1720 Fragaria x ananassa HOM05D000751 ORTHO05D005618 1.3e-166 590.5 642 50.3
EL10As14g24084 Beta vulgaris HOM05D000751 ORTHO05D005618 5.5e-165 585.1 626 51.0
Duzib168G1036 Durio zibethinus HOM05D000751 ORTHO05D005618 5.2e-163 578.6 615 52.0
Hund24686 Selenicereus undatus HOM05D000751 ORTHO05D005618 1.5e-162 577.0 652 48.6
Lsat_1_v5_gn_7_56501 Lactuca sativa HOM05D000751 ORTHO05D005618 2.0e-162 576.6 620 52.4
Aa31LG7G2520 Aethionema arabicum HOM05D000751 ORTHO05D005618 1.4e-160 570.5 616 50.2
Thhalv10006892m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 1.2e-159 567.4 593 50.3
HanXRQChr03g0068331 Helianthus annuus HOM05D000751 ORTHO05D005618 1.0e-158 564.3 569 53.1
Carub.0001s1742 Capsella rubella HOM05D000751 ORTHO05D005618 2.3e-158 563.1 621 49.9
Migut.L01901 Erythranthe guttata HOM05D000751 ORTHO05D005618 2.9e-158 562.8 593 50.9
Nitab4.5_0008918g0010 Nicotiana tabacum HOM05D000751 ORTHO05D005618 2.9e-158 562.8 614 50.5
A08p30790 Brassica napus HOM05D000751 ORTHO05D005618 1.1e-157 560.8 621 49.3
AL1G30040 Arabidopsis lyrata HOM05D000751 ORTHO05D005618 1.9e-157 560.1 618 49.2
CARHR018290 Cardamine hirsuta HOM05D000751 ORTHO05D005618 2.5e-157 559.7 592 50.2
AT1G17690 Arabidopsis thaliana HOM05D000751 ORTHO05D005618 5.5e-157 558.5 620 50.2
BraA08t35010Z Brassica rapa HOM05D000751 ORTHO05D005618 5.5e-157 558.5 598 50.5
ATR0626G151 Amborella trichopoda HOM05D000751 ORTHO05D005618 2.8e-156 556.2 593 51.4
C08p18130 Brassica napus HOM05D000751 ORTHO05D005618 2.8e-156 556.2 619 49.3
MSTRG.26530 Avicennia marina HOM05D000751 ORTHO05D005618 3.6e-156 555.8 605 50.1
BolC8t49447H Brassica oleracea HOM05D000751 ORTHO05D005618 1.4e-155 553.9 628 49.0
DCAR_007397 Daucus carota HOM05D000751 ORTHO05D005618 5.7e-154 548.5 589 52.0
FAN12G3496 Fragaria x ananassa HOM05D000751 ORTHO05D005618 2.2e-153 546.6 552 53.3
ClCG06G013510 Citrullus lanatus HOM05D000751 ORTHO05D005618 3.1e-152 542.7 765 44.2
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 5.0e-150 535.4 577 49.9
Thhalv10023137m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 4.3e-149 532.3 596 48.8
Glyma.15G163800 Glycine max HOM05D000751 ORTHO05D005618 4.7e-148 528.9 396 69.4
Rhsim01G0197100 Rhododendron simsii HOM05D000751 ORTHO05D005618 4.4e-146 522.3 646 47.4
SGA_v2.0_scaffold595G53113 Striga asiatica HOM05D000751 ORTHO05D005618 4.4e-146 522.3 577 48.5
Cc06_g21130 Coffea canephora HOM05D000751 ORTHO05D005618 9.2e-144 514.6 538 52.4
Aqoxy2G02322 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 2.0e-143 513.5 583 51.3
Sopen07g005110 Solanum pennellii HOM05D000751 ORTHO05D005618 6.6e-142 508.4 550 50.4
vmacro08789 Vaccinium macrocarpon HOM05D000751 ORTHO05D005618 2.1e-140 503.4 897 37.9
AUR62014975 Chenopodium quinoa HOM05D000751 ORTHO05D005618 8.0e-140 501.5 619 46.7
SalBow1G4534 Salvia bowleyana HOM05D000751 ORTHO05D005618 1.1e-139 501.1 596 47.1
unitig_8.g3549 Utricularia gibba HOM05D000751 ORTHO05D005618 1.8e-139 500.4 572 47.4
CDE06G1960 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 2.2e-137 493.4 494 52.4
SalBow6G0847 Salvia bowleyana HOM05D000751 ORTHO05D005618 2.4e-136 490.0 612 45.9
Os05g0295100 Oryza sativa ssp. japonica HOM05D000751 ORTHO05D005618 1.2e-135 487.6 609 45.6
Zm00001eb406370 Zea mays HOM05D000751 ORTHO05D005618 1.6e-135 487.3 613 44.5
SalBow6G2294 Salvia bowleyana HOM05D000751 ORTHO05D005618 3.9e-126 456.1 627 43.2
Oeu047314.3 Olea europaea HOM05D000751 ORTHO05D005618 7.3e-125 451.8 600 43.3
CDE02G3188 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 3.6e-124 449.5 405 57.0
AagrBONN_evm.TU.Sc2ySwM_369.592 Anthoceros agrestis HOM05D000751 ORTHO05D005618 5.2e-123 445.7 566 43.5
MD13G1251200 Malus domestica HOM05D000751 ORTHO05D005618 1.7e-121 440.7 380 58.7
MD03G1036400 Malus domestica HOM05D000751 ORTHO05D005618 3.8e-121 439.5 448 53.3
Carub.0003s1065 Capsella rubella HOM05D000751 ORTHO05D005618 1.6e-119 434.1 614 42.0
DCAR_007396 Daucus carota HOM05D000751 ORTHO05D005618 1.3e-118 431.0 522 46.4
Mapoly0074s0025 Marchantia polymorpha HOM05D000751 ORTHO05D005618 5.1e-118 429.1 570 40.4
SMO296G0020 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 8.1e-116 421.8 617 40.7
Pp3c10_17670 Physcomitrium patens HOM05D000751 ORTHO05D005618 2.2e-113 413.7 579 41.3
Aqoxy1G02673 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 2.3e-102 377.1 391 52.7
Cc10_g11360 Coffea canephora HOM05D000751 ORTHO05D005618 5.8e-98 362.5 495 45.5
CBR_g38171 Chara braunii HOM05D000751 ORTHO05D005618 7.6e-98 362.1 664 35.4
Ca_05496_v3 Cicer arietinum L. HOM05D000751 ORTHO05D005618 1.5e-93 347.8 293 64.2
BcaB05g23995 Brassica carinata HOM05D000751 ORTHO05D005618 6.2e-92 342.4 395 46.8
HPP92_028564 Vanilla planifolia HOM05D000751 ORTHO05D005618 6.9e-91 339.0 288 58.0
AUR62030665 Chenopodium quinoa HOM05D000751 ORTHO05D005618 9.0e-91 338.6 322 55.0
Psat4g182200 Pisum sativum HOM05D000751 ORTHO05D005618 1.0e-89 335.1 294 62.2
CAN.G193.38 Capsicum annuum HOM05D000751 ORTHO05D005618 7.1e-88 328.9 347 50.4
SMO174G0270 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 2.1e-87 327.4 420 42.6
CAN.G266.4 Capsicum annuum HOM05D000751 ORTHO05D005618 3.5e-87 326.6 311 55.3
SalBow6G6994 Salvia bowleyana HOM05D000751 ORTHO05D005618 4.6e-87 326.2 505 40.0
SEGI_35111 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 1.5e-85 321.2 297 53.9
Hma1.2p1_0909F.1_g235820 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 2.7e-79 300.4 405 44.7
Cre04.g218300 Chlamydomonas reinhardtii HOM05D000751 ORTHO05D005618 2.3e-78 297.4 422 37.4
Dinv26447 Davidia involucrata HOM05D000751 ORTHO05D005618 8.2e-68 262.3 299 50.8
BolC2t08163H Brassica oleracea HOM05D000751 ORTHO05D005618 2.4e-67 260.8 286 51.0
MCO16G456 Micromonas commoda HOM05D000751 ORTHO05D005618 3.6e-63 246.9 426 36.6
Nn2g10858 Nelumbo nucifera HOM05D000751 ORTHO05D005618 6.5e-57 226.1 157 72.0
Medtr4g415340 Medicago truncatula HOM05D000751 ORTHO05D005618 1.6e-55 221.5 219 58.9
Psat4g047120 Pisum sativum HOM05D000751 ORTHO05D005618 1.0e-54 218.8 151 76.2
Medtr8g466490 Medicago truncatula HOM05D000751 ORTHO05D005618 3.1e-51 207.2 289 44.3
COL.COLO4_25458 Corchorus olitorius HOM05D000751 ORTHO05D005618 1.6e-50 204.9 348 38.8
arahy.Tifrunner.gnm1.ann1.EK4LKE Arachis hypogaea HOM05D000751 ORTHO05D005618 5.0e-49 199.9 148 73.0
Cfa022413 Carpinus fangiana HOM05D000751 ORTHO05D005618 1.5e-48 198.4 609 28.2
HPP92_003076 Vanilla planifolia HOM05D000751 ORTHO05D005618 6.1e-47 193.0 200 49.5
PRCOL_00003641 Prasinoderma coloniale HOM05D000751 ORTHO05D005618 9.8e-45 185.7 484 29.3
Cc06_g21120 Coffea canephora HOM05D000751 ORTHO05D005618 1.8e-38 164.9 130 60.8
BcaC03g14585 Brassica carinata HOM05D000751 ORTHO05D005618 1.7e-36 158.3 237 44.3
COL.COLO4_25459 Corchorus olitorius HOM05D000751 ORTHO05D005618 2.3e-33 147.9 117 62.4
Solyc07g009350.4 Solanum lycopersicum HOM05D000751 ORTHO05D005618 1.1e-32 145.6 205 40.5
HPP92_028565 Vanilla planifolia HOM05D000751 ORTHO05D005618 1.1e-32 145.6 128 54.7
Haze_19748 Corylus avellana HOM05D000751 ORTHO05D005618 2.5e-32 144.4 291 37.1
SEGI_01124 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 2.8e-31 141.0 131 51.1
Aqoxy3G01439 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 3.6e-31 140.6 91 69.2
Psat4g182280 Pisum sativum HOM05D000751 ORTHO05D005618 6.2e-31 139.8 83 78.3
Nn2g10857 Nelumbo nucifera HOM05D000751 ORTHO05D005618 1.8e-30 138.3 83 73.5
Sabra15G0073700 Salix brachista HOM05D000810 ORTHO05D005618 4.0e-30 137.1 332 33.7
AUR62024882 Chenopodium quinoa HOM05D000751 ORTHO05D005618 1.5e-29 135.2 181 42.5
Medtr8g466500 Medicago truncatula HOM05D000751 ORTHO05D005618 1.5e-29 135.2 287 34.5
Hma1.2p1_2432F.1_g322050 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 3.9e-25 120.6 128 46.9
SEGI_01614 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 5.0e-25 120.2 100 57.0
CAN.G266.3 Capsicum annuum HOM05D000751 ORTHO05D005618 6.6e-25 119.8 234 37.6
SEGI_01043 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 5.6e-24 116.7 117 54.7
CAN.G101.3 Capsicum annuum HOM05D000751 ORTHO05D005618 4.4e-21 107.1 111 52.3
Aqoxy125s004 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 2.9e-20 104.4 100 55.0
Gorai.003G081200 Gossypium raimondii HOM05D000751 ORTHO05D005618 2.4e-19 101.3 69 65.2
Sopen07g005100 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-18 99.0 69 65.2
Hma1.2p1_2432F.1_g322070 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 6.6e-17 93.2 91 53.8
Sc06g0007910 Simmondsia chinensis HOM05D000751 ORTHO05D005618 1.1e-16 92.4 133 36.1
MD13G1251100 Malus domestica HOM05D000751 ORTHO05D005618 8.1e-15 86.3 140 37.1
HPP92_003077 Vanilla planifolia HOM05D000751 ORTHO05D005618 1.4e-14 85.5 78 51.3
Aqoxy1G02674 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.7e-09 68.6 96 38.5
Aqoxy2G02180 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.5e-08 65.5 50 70.0
Hma1.2p1_2432F.1_g322060 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.1e-06 59.3 52 59.6
MD13G1245100 Malus domestica HOM05D000751 ORTHO05D005618 5.2e-06 57.0 57 54.4


User provided reference genes

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