Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.4XE8UG Arachis hypogaea HOM05D008068 ORTHO05D084877 1.1e-144 516.5 249 100.0
arahy.Tifrunner.gnm1.ann1.7P5I0R Arachis hypogaea HOM05D008068 ORTHO05D084873 2.6e-77 292.7 236 69.1
arahy.Tifrunner.gnm1.ann1.X46T81 Arachis hypogaea HOM05D008068 ORTHO05D082736 2.4e-75 286.2 241 67.6
arahy.Tifrunner.gnm1.ann1.17Q87X Arachis hypogaea HOM05D008068 ORTHO05D082437 4.7e-71 271.9 255 61.6
arahy.Tifrunner.gnm1.ann1.EY9VSD Arachis hypogaea HOM05D008068 ORTHO05D085056 1.9e-67 260.0 236 60.2
arahy.Tifrunner.gnm1.ann1.NWI6KJ Arachis hypogaea HOM05D008068 ORTHO05D084841 1.9e-67 260.0 236 61.0
arahy.Tifrunner.gnm1.ann1.10Y6YW Arachis hypogaea HOM05D008068 ORTHO05D082691 4.2e-67 258.8 238 61.3
arahy.Tifrunner.gnm1.ann1.PB57FM Arachis hypogaea HOM05D008068 ORTHO05D086501 3.0e-65 252.7 237 60.3
arahy.Tifrunner.gnm1.ann1.59WZJD Arachis hypogaea HOM05D008068 ORTHO05D083997 8.7e-65 251.1 233 60.5
arahy.Tifrunner.gnm1.ann1.YE14ID Arachis hypogaea HOM05D008068 ORTHO05D087739 1.9e-64 250.0 238 59.7
arahy.Tifrunner.gnm1.ann1.2UW0D0 Arachis hypogaea HOM05D008068 ORTHO05D086571 5.3e-62 241.9 234 59.8
arahy.Tifrunner.gnm1.ann1.HFD3GT Arachis hypogaea HOM05D008068 ORTHO05D085352 6.9e-62 241.5 234 59.8
arahy.Tifrunner.gnm1.ann1.3YRU3X Arachis hypogaea HOM05D008068 ORTHO05D082988 2.6e-61 239.6 234 59.4
arahy.Tifrunner.gnm1.ann1.5DZ8IP Arachis hypogaea HOM05D008068 ORTHO05D087565 7.6e-61 238.0 236 59.3
arahy.Tifrunner.gnm1.ann1.E0E75X Arachis hypogaea HOM05D008068 ORTHO05D082990 7.6e-61 238.0 236 59.3
arahy.Tifrunner.gnm1.ann1.F9EXKZ Arachis hypogaea HOM05D008068 ORTHO05D084874 7.6e-61 238.0 236 59.3
arahy.Tifrunner.gnm1.ann1.A1C9BW Arachis hypogaea HOM05D008068 ORTHO05D085439 6.4e-60 235.0 236 58.9
arahy.Tifrunner.gnm1.ann1.I35I7R Arachis hypogaea HOM05D008068 ORTHO05D082699 6.4e-60 235.0 236 58.9
arahy.Tifrunner.gnm1.ann1.HNT14Y Arachis hypogaea HOM05D008068 ORTHO05D086246 4.2e-59 232.3 235 58.3
arahy.Tifrunner.gnm1.ann1.79KZZT Arachis hypogaea HOM05D008068 ORTHO05D085613 5.4e-59 231.9 236 59.3
arahy.Tifrunner.gnm1.ann1.S512F7 Arachis hypogaea HOM05D008068 ORTHO05D086966 9.3e-59 231.1 235 57.9
arahy.Tifrunner.gnm1.ann1.C4F96H Arachis hypogaea HOM05D008068 ORTHO05D086334 1.2e-58 230.7 238 57.6
arahy.Tifrunner.gnm1.ann1.37DLMD Arachis hypogaea HOM05D008068 ORTHO05D084091 4.6e-58 228.8 234 58.1
arahy.Tifrunner.gnm1.ann1.6TQB5F Arachis hypogaea HOM05D008068 ORTHO05D085897 6.0e-58 228.4 234 58.5
arahy.Tifrunner.gnm1.ann1.MJ0Z5Z Arachis hypogaea HOM05D008068 ORTHO05D084804 6.0e-58 228.4 240 59.2
arahy.Tifrunner.gnm1.ann1.230WCJ Arachis hypogaea HOM05D008068 ORTHO05D083477 7.9e-58 228.0 235 56.2
arahy.Tifrunner.gnm1.ann1.34KNR9 Arachis hypogaea HOM05D008068 ORTHO05D083570 1.0e-57 227.6 245 55.9
arahy.Tifrunner.gnm1.ann1.F2L50Y Arachis hypogaea HOM05D008068 ORTHO05D085157 3.9e-57 225.7 248 56.0
arahy.Tifrunner.gnm1.ann1.T64XSX Arachis hypogaea HOM05D008068 ORTHO05D086019 5.1e-57 225.3 245 55.1
arahy.Tifrunner.gnm1.ann1.XR0X4P Arachis hypogaea HOM05D008068 ORTHO05D087604 5.1e-57 225.3 245 55.1
arahy.Tifrunner.gnm1.ann1.2HRN76 Arachis hypogaea HOM05D008068 ORTHO05D085256 1.1e-56 224.2 233 54.9
arahy.Tifrunner.gnm1.ann1.D8JX3Z Arachis hypogaea HOM05D008068 ORTHO05D085220 1.1e-56 224.2 233 54.9
arahy.Tifrunner.gnm1.ann1.V6ISDU Arachis hypogaea HOM05D008068 ORTHO05D085045 1.1e-56 224.2 240 55.4
arahy.Tifrunner.gnm1.ann1.377GQN Arachis hypogaea HOM05D008068 ORTHO05D086842 1.9e-56 223.4 233 54.9
arahy.Tifrunner.gnm1.ann1.E521J7 Arachis hypogaea HOM05D008068 ORTHO05D085556 1.9e-56 223.4 233 54.9
arahy.Tifrunner.gnm1.ann1.ZRX0EM Arachis hypogaea HOM05D008068 ORTHO05D085825 2.5e-56 223.0 242 57.0
arahy.Tifrunner.gnm1.ann1.I96QWE Arachis hypogaea HOM05D008068 ORTHO05D084933 3.3e-56 222.6 232 58.6
arahy.Tifrunner.gnm1.ann1.G62WC9 Arachis hypogaea HOM05D008068 ORTHO05D085791 5.6e-56 221.9 245 55.1
arahy.Tifrunner.gnm1.ann1.PN9ZPA Arachis hypogaea HOM05D008068 ORTHO05D003897 9.6e-56 221.1 234 55.6
arahy.Tifrunner.gnm1.ann1.5A657L Arachis hypogaea HOM05D008068 ORTHO05D086933 8.1e-55 218.0 233 54.1
arahy.Tifrunner.gnm1.ann1.PWY63Z Arachis hypogaea HOM05D008068 ORTHO05D083197 8.1e-55 218.0 234 55.1
arahy.Tifrunner.gnm1.ann1.Q414C2 Arachis hypogaea HOM05D008068 ORTHO05D085482 5.8e-53 211.8 234 55.1
arahy.Tifrunner.gnm1.ann1.RKN80Q Arachis hypogaea HOM05D008068 ORTHO05D082898 5.8e-53 211.8 234 55.1
arahy.Tifrunner.gnm1.ann1.S94PPM Arachis hypogaea HOM05D008068 ORTHO05D084315 4.2e-51 205.7 220 56.4
arahy.Tifrunner.gnm1.ann1.ENC5JA Arachis hypogaea HOM05D008068 ORTHO05D087433 7.1e-51 204.9 253 49.4
arahy.Tifrunner.gnm1.ann1.3EF69T Arachis hypogaea HOM05D008068 ORTHO05D009829 3.5e-50 202.6 240 53.8
arahy.Tifrunner.gnm1.ann1.1PBH7D Arachis hypogaea HOM05D008068 ORTHO05D085165 6.0e-50 201.8 245 50.6
arahy.Tifrunner.gnm1.ann1.1PW3KD Arachis hypogaea HOM05D008068 ORTHO05D084468 6.0e-50 201.8 233 53.2
arahy.Tifrunner.gnm1.ann1.47JMQS Arachis hypogaea HOM05D008068 ORTHO05D085960 3.9e-49 199.1 234 52.6
arahy.Tifrunner.gnm1.ann1.BS9BQ3 Arachis hypogaea HOM05D008068 ORTHO05D082839 6.7e-49 198.4 233 52.8
arahy.Tifrunner.gnm1.ann1.Z3DM2X Arachis hypogaea HOM05D008068 ORTHO05D084139 1.1e-48 197.6 240 52.5
arahy.Tifrunner.gnm1.ann1.1ZZR7L Arachis hypogaea HOM05D008068 ORTHO05D084565 1.8e-46 190.3 240 51.7
arahy.Tifrunner.gnm1.ann1.PV9S24 Arachis hypogaea HOM05D008068 ORTHO05D083876 3.0e-41 172.9 228 48.7
arahy.Tifrunner.gnm1.ann1.6WZ5TA Arachis hypogaea HOM05D008068 ORTHO05D082891 1.3e-39 167.5 215 50.2
arahy.Tifrunner.gnm1.ann1.67KEEQ Arachis hypogaea HOM05D008068 ORTHO05D085050 9.4e-35 151.4 136 64.0
arahy.Tifrunner.gnm1.ann1.R7CLAG Arachis hypogaea HOM05D008068 ORTHO05D085291 1.3e-28 131.0 163 50.3
arahy.Tifrunner.gnm1.ann1.I3IPVK Arachis hypogaea HOM05D008068 ORTHO05D085774 1.7e-28 130.6 135 57.8
arahy.Tifrunner.gnm1.ann1.SD4XFJ Arachis hypogaea HOM05D008068 ORTHO05D084859 3.0e-25 119.8 127 55.1
arahy.Tifrunner.gnm1.ann1.I2QCNX Arachis hypogaea HOM05D008068 ORTHO05D083088 1.1e-19 101.3 159 40.3
arahy.Tifrunner.gnm1.ann1.UWA93C Arachis hypogaea HOM05D008068 ORTHO05D085227 8.0e-18 95.1 111 52.3
arahy.Tifrunner.gnm1.ann1.1NQ2CM Arachis hypogaea HOM05D008068 ORTHO05D085691 3.9e-17 92.8 148 39.2
arahy.Tifrunner.gnm1.ann1.S9VBH9 Arachis hypogaea HOM05D008068 ORTHO05D085702 3.7e-15 86.3 64 60.9
arahy.Tifrunner.gnm1.ann1.GIWP48 Arachis hypogaea HOM05D008068 ORTHO05D084275 3.1e-14 83.2 136 41.9
Hund25010 Selenicereus undatus HOM05D003851 ORTHO05D005657 1.2e-13 81.3 237 32.5
arahy.Tifrunner.gnm1.ann1.23JWM4 Arachis hypogaea HOM05D000563 ORTHO05D000536 5.0e-12 75.9 147 36.1
Sc11g0003990 Simmondsia chinensis HOM05D003851 ORTHO05D005657 1.9e-11 73.9 232 29.3
Lalb_Chr17g0338751 Lupinus albus HOM05D003851 ORTHO05D005657 3.2e-11 73.2 235 28.9
Ah.16g102720 Amaranthus hybridus HOM05D003851 ORTHO05D005657 4.2e-11 72.8 237 30.8
AUR62014128 Chenopodium quinoa HOM05D003851 ORTHO05D005657 2.7e-10 70.1 237 30.8
AUR62039549 Chenopodium quinoa HOM05D003851 ORTHO05D005657 3.6e-10 69.7 237 30.8
EL10Ac6g14256 Beta vulgaris HOM05D003851 ORTHO05D005657 6.1e-10 68.9 237 30.4
Glyma.10G266600 Glycine max HOM05D003851 ORTHO05D005657 6.1e-10 68.9 224 29.9
arahy.Tifrunner.gnm1.ann1.9KT8MP Arachis hypogaea HOM05D008068 ORTHO05D086294 8.0e-10 68.6 60 56.7
VMungo0720G3117 Vigna mungo HOM05D003851 ORTHO05D005657 8.0e-10 68.6 224 30.4
Aqoxy3G00152 Aquilegia oxysepala HOM05D003851 ORTHO05D005657 1.0e-09 68.2 228 31.1
arahy.Tifrunner.gnm1.ann1.GYNY95 Arachis hypogaea HOM05D003851 ORTHO05D005657 1.4e-09 67.8 233 29.6
arahy.Tifrunner.gnm1.ann1.QBU7FE Arachis hypogaea HOM05D003851 ORTHO05D005657 1.4e-09 67.8 233 29.6
CsaV3_5G028640 Cucumis sativus L. HOM05D003851 ORTHO05D005657 1.4e-09 67.8 235 30.6
SMO141G0055 Selaginella moellendorffii HOM05D003851 ORTHO05D005657 1.4e-09 67.8 241 27.4
SEGI_09716 Sequoiadendron giganteum HOM05D003851 ORTHO05D005657 1.4e-09 67.8 236 29.2
TAR622G1410 Trochodendron aralioides HOM05D003851 ORTHO05D005657 1.8e-09 67.4 237 28.7
MELO3C005328.2 Cucumis melo HOM05D003851 ORTHO05D005657 2.3e-09 67.0 235 30.6
CANSAT01G1493 Cannabis sativa HOM05D003851 ORTHO05D005657 4.0e-09 66.2 235 29.4
ClCG01G006040 Citrullus lanatus HOM05D003851 ORTHO05D005657 4.0e-09 66.2 235 30.6
FvH4_4g26260 Fragaria vesca HOM05D003851 ORTHO05D005657 4.0e-09 66.2 233 28.3
FAN07G1894 Fragaria x ananassa HOM05D003851 ORTHO05D005657 4.0e-09 66.2 233 28.3
FAN12G1256 Fragaria x ananassa HOM05D003851 ORTHO05D005657 4.0e-09 66.2 233 28.3
FAN12G3131 Fragaria x ananassa HOM05D003851 ORTHO05D005657 4.0e-09 66.2 233 28.3
FAN17G0190 Fragaria x ananassa HOM05D003851 ORTHO05D005657 4.0e-09 66.2 233 28.3
FAN22G1865 Fragaria x ananassa HOM05D003851 ORTHO05D005657 4.0e-09 66.2 233 28.3
RcHm_v2.0_Chr4g0433861 Rosa chinensis HOM05D003851 ORTHO05D005657 4.0e-09 66.2 233 28.8
Manes.06G062600 Manihot esculenta HOM05D003851 ORTHO05D005657 6.7e-09 65.5 239 29.7
arahy.Tifrunner.gnm1.ann1.I9DED3 Arachis hypogaea HOM05D008068 ORTHO05D083270 8.8e-09 65.1 74 50.0
Potri.008G126900 Populus trichocarpa HOM05D003851 ORTHO05D005657 1.2e-08 64.7 233 29.6
AT1G15130 Arabidopsis thaliana HOM05D003851 ORTHO05D005657 1.5e-08 64.3 238 29.4
HanXRQChr17g0567071 Helianthus annuus HOM05D003851 ORTHO05D005657 1.5e-08 64.3 235 28.9
MD16G1033300 Malus domestica HOM05D003851 ORTHO05D005657 2.0e-08 63.9 224 29.0
Manes.14G136300 Manihot esculenta HOM05D003851 ORTHO05D005657 2.0e-08 63.9 235 29.8
Phvul.007G035300 Phaseolus vulgaris HOM05D003851 ORTHO05D005657 2.0e-08 63.9 224 27.7
Sed0026980 Sechium edule HOM05D003851 ORTHO05D005657 2.0e-08 63.9 235 28.9
BcaB02g06581 Brassica carinata HOM05D003851 ORTHO05D005657 2.6e-08 63.5 234 27.4
Ciclev10014287m.g Citrus clementina HOM05D003851 ORTHO05D005657 3.3e-08 63.2 228 29.8
Nn4g24048 Nelumbo nucifera HOM05D003851 ORTHO05D005657 3.3e-08 63.2 237 28.3
CiPaw.05G246300 Carya illinoinensis HOM05D003851 ORTHO05D005657 4.4e-08 62.8 227 29.5
QL01p002786 Quercus lobata HOM05D003851 ORTHO05D005657 4.4e-08 62.8 227 30.4
THA.LOC104805047 Tarenaya hassleriana HOM05D003851 ORTHO05D005657 4.4e-08 62.8 233 27.9
HPP92_013139 Vanilla planifolia HOM05D003851 ORTHO05D005657 4.4e-08 62.8 229 27.5
AL1G27200 Arabidopsis lyrata HOM05D003851 ORTHO05D005657 5.7e-08 62.4 233 29.2
CARHR015650 Cardamine hirsuta HOM05D003851 ORTHO05D005657 5.7e-08 62.4 233 29.6
arahy.Tifrunner.gnm1.ann1.DBBT62 Arachis hypogaea HOM05D008068 ORTHO05D086034 9.7e-08 61.6 67 50.7
MD13G1031100 Malus domestica HOM05D003851 ORTHO05D005657 9.7e-08 61.6 237 27.8
BcaNung05516 Brassica carinata HOM05D003851 ORTHO05D005657 1.3e-07 61.2 239 27.2
Cfa015793 Carpinus fangiana HOM05D003851 ORTHO05D005657 1.7e-07 60.8 227 29.1
CDE04G3131 Ceratophyllum demersum HOM05D003851 ORTHO05D005657 1.7e-07 60.8 236 28.4
THA.LOC104824160 Tarenaya hassleriana HOM05D003851 ORTHO05D005657 1.7e-07 60.8 224 29.0
C08p45140 Brassica napus HOM05D003851 ORTHO05D005657 2.2e-07 60.5 239 26.8
PGR102G1971 Punica granatum HOM05D003851 ORTHO05D005657 2.2e-07 60.5 227 30.0
CiPaw.06G014300 Carya illinoinensis HOM05D003851 ORTHO05D005657 2.8e-07 60.1 227 29.1
Prupe.1G321000 Prunus persica HOM05D003851 ORTHO05D005657 2.8e-07 60.1 233 28.3
Sp1g13470 Schrenkiella parvula HOM05D003851 ORTHO05D005657 2.8e-07 60.1 234 27.4
Thhalv10006787m.g Eutrema salsugineum HOM05D003851 ORTHO05D005657 3.7e-07 59.7 234 26.9
Gohir.A03G148400 Gossypium hirsutum HOM05D003851 ORTHO05D005657 3.7e-07 59.7 227 28.2
CDE08G0886 Ceratophyllum demersum HOM05D003851 ORTHO05D005657 4.8e-07 59.3 236 28.4
Glyma.20G124000 Glycine max HOM05D003851 ORTHO05D005657 6.3e-07 58.9 245 27.3
Thecc.02G217200 Theobroma cacao HOM05D003851 ORTHO05D005657 6.3e-07 58.9 233 27.9
MBI06_g17215_MAGBIO Magnolia biondii HOM05D003851 ORTHO05D005657 8.2e-07 58.5 228 29.8
Lalb_Chr21g0308571 Lupinus albus HOM05D003851 ORTHO05D005657 1.1e-06 58.2 233 28.3
Potri.010G116400 Populus trichocarpa HOM05D003851 ORTHO05D005657 1.1e-06 58.2 226 28.3
A09p61550 Brassica napus HOM05D003851 ORTHO05D005657 1.4e-06 57.8 239 26.8
BolC8t52062H Brassica oleracea HOM05D003851 ORTHO05D005657 1.8e-06 57.4 239 26.4
Os10g0495300 Oryza sativa ssp. japonica HOM05D003851 ORTHO05D005657 1.8e-06 57.4 234 29.1
BraA09t41528Z Brassica rapa HOM05D003851 ORTHO05D005657 3.1e-06 56.6 239 26.4
Eucgr.B02881 Eucalyptus grandis HOM05D003851 ORTHO05D005657 3.1e-06 56.6 227 28.2
Haze_00700 Corylus avellana HOM05D003851 ORTHO05D005657 4.1e-06 56.2 227 28.6
BcaB03g14554 Brassica carinata HOM05D003851 ORTHO05D005657 7.0e-06 55.5 234 26.5
DCAR_023618 Daucus carota HOM05D003851 ORTHO05D005657 7.0e-06 55.5 231 26.0
TWI31G1382 Tripterygium wilfordii HOM05D003851 ORTHO05D005657 7.0e-06 55.5 233 28.3
Aa31LG1G30 Aethionema arabicum HOM05D003851 ORTHO05D005657 9.1e-06 55.1 233 27.0


User provided reference genes

Program Settings