Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.4X2HTN Arachis hypogaea HOM05D007885 ORTHO05D010052 9.2e-34 146.4 76 100.0
Lj6g0000644 Lotus japonicus HOM05D007885 ORTHO05D010052 8.3e-19 96.7 67 76.1
Glyma.15G127300 Glycine max HOM05D007885 ORTHO05D010052 1.6e-17 92.4 70 68.6
Thecc.05G232100 Theobroma cacao HOM05D007885 ORTHO05D010052 1.7e-16 89.0 70 67.1
Phvul.006G131300 Phaseolus vulgaris HOM05D007885 ORTHO05D010052 3.0e-16 88.2 73 61.6
ClCG06G008190 Citrullus lanatus HOM05D007885 ORTHO05D010052 2.5e-15 85.1 60 70.0
CAN.G138.10 Capsicum annuum HOM05D007885 ORTHO05D010052 3.3e-15 84.7 59 71.2
Sopen08g013480 Solanum pennellii HOM05D007885 ORTHO05D010052 4.3e-15 84.3 70 61.4
TWI34G1949 Tripterygium wilfordii HOM05D007885 ORTHO05D010052 5.6e-15 84.0 78 60.3
Lalb_Chr18g0057781 Lupinus albus HOM05D007885 ORTHO05D010052 7.3e-15 83.6 60 68.3
Sed0017556 Sechium edule HOM05D007885 ORTHO05D010052 7.3e-15 83.6 60 70.0
Psat1g169600 Pisum sativum HOM05D007885 ORTHO05D010052 9.5e-15 83.2 62 66.1
Medtr2g029000 Medicago truncatula HOM05D007885 ORTHO05D010052 1.6e-14 82.4 65 61.5
MELO3C020379.2 Cucumis melo HOM05D007885 ORTHO05D010052 2.8e-14 81.6 60 68.3
Rhsim07G0045900 Rhododendron simsii HOM05D007885 ORTHO05D010052 2.8e-14 81.6 75 58.7
TPR.G17523 Trifolium pratense HOM05D007885 ORTHO05D010052 2.8e-14 81.6 74 58.1
QL04p052580 Quercus lobata HOM05D007885 ORTHO05D010052 3.6e-14 81.3 68 61.8
Hma1.2p1_0353F.1_g133360 Hydrangea macrophylla HOM05D007885 ORTHO05D010052 4.7e-14 80.9 70 57.1
CsaV3_2G010950 Cucumis sativus L. HOM05D007885 ORTHO05D010052 6.2e-14 80.5 60 66.7
Migut.B01442 Erythranthe guttata HOM05D007885 ORTHO05D010052 1.1e-13 79.7 70 58.6
Potri.013G072700 Populus trichocarpa HOM05D007885 ORTHO05D010052 1.1e-13 79.7 66 65.2
Lsat_1_v5_gn_3_26720 Lactuca sativa HOM05D007885 ORTHO05D010052 1.4e-13 79.3 71 53.5
Solyc08g044345.1 Solanum lycopersicum HOM05D007885 ORTHO05D010052 1.4e-13 79.3 70 58.6
GSVIVG01011323001 Vitis vinifera HOM05D007885 ORTHO05D010052 1.8e-13 79.0 56 69.6
Actinidia05823 Actinidia chinensis HOM05D007885 ORTHO05D010052 2.4e-13 78.6 55 69.1
Duzib177G0659 Durio zibethinus HOM05D007885 ORTHO05D010052 2.4e-13 78.6 70 60.0
Oeu026138.2 Olea europaea HOM05D007885 ORTHO05D010052 4.0e-13 77.8 61 70.5
Aqoxy3G02001 Aquilegia oxysepala HOM05D007885 ORTHO05D010052 6.8e-13 77.0 73 56.2
Dinv43531 Davidia involucrata HOM05D007885 ORTHO05D010052 6.8e-13 77.0 69 56.5
Ciclev10033227m.g Citrus clementina HOM05D007885 ORTHO05D010052 1.5e-12 75.9 72 58.3
TAR629G0995 Trochodendron aralioides HOM05D007885 ORTHO05D010052 2.6e-12 75.1 70 55.7
unitig_8.g3853 Utricularia gibba HOM05D007033 ORTHO05D008770 2.6e-12 75.1 71 53.5
Dinv43976 Davidia involucrata HOM05D007885 ORTHO05D010052 3.4e-12 74.7 71 53.5
FvH4_7g07270 Fragaria vesca HOM05D007885 ORTHO05D010052 3.4e-12 74.7 73 57.5
Gohir.D13G100200 Gossypium hirsutum HOM05D007885 ORTHO05D010052 3.4e-12 74.7 70 54.3
Nn1g02087 Nelumbo nucifera HOM05D007885 ORTHO05D010052 3.4e-12 74.7 56 66.1
AUR62038019 Chenopodium quinoa HOM05D007885 ORTHO05D010052 5.8e-12 73.9 56 66.1
Gorai.013G112400 Gossypium raimondii HOM05D007885 ORTHO05D010052 5.8e-12 73.9 70 54.3
Gohir.A13G081900 Gossypium hirsutum HOM05D007885 ORTHO05D010052 7.6e-12 73.6 57 64.9
Manes.08G157500 Manihot esculenta HOM05D007885 ORTHO05D010052 7.6e-12 73.6 70 52.9
Sc23g0004750 Simmondsia chinensis HOM05D007885 ORTHO05D010052 2.2e-11 72.0 70 51.4
Aa31LG9G17960 Aethionema arabicum HOM05D007885 ORTHO05D010052 1.4e-10 69.3 66 57.6
Cc02_g26380 Coffea canephora HOM05D007885 ORTHO05D010052 1.4e-10 69.3 55 63.6
ECA246G2713 Erigeron canadensis HOM05D007885 ORTHO05D010052 2.4e-10 68.6 57 56.1
PGSC0003DMG400025196 Solanum tuberosum HOM05D007885 ORTHO05D010052 2.4e-10 68.6 46 69.6
Zm00001eb306480 Zea mays HOM05D007885 ORTHO05D010052 2.4e-10 68.6 60 56.7
Lj7A558G43 Lonicera japonica HOM05D007885 ORTHO05D010052 3.2e-10 68.2 73 54.8
HanXRQChr15g0465371 Helianthus annuus HOM05D007885 ORTHO05D010052 5.4e-10 67.4 54 59.3
Sabra13G0062600 Salix brachista HOM05D007885 ORTHO05D010052 7.1e-10 67.0 58 60.3
Ah.05g177170 Amaranthus hybridus HOM05D007885 ORTHO05D010052 2.1e-09 65.5 60 51.7
MD07G1078800 Malus domestica HOM05D007885 ORTHO05D010052 2.1e-09 65.5 68 54.4
Peaxi162Scf01343g00147 Petunia axillaris HOM05D007885 ORTHO05D010052 2.7e-09 65.1 45 68.9
CANSAT01G2257 Cannabis sativa HOM05D007885 ORTHO05D010052 6.0e-09 63.9 64 53.1
Carub.0001s3844 Capsella rubella HOM05D007885 ORTHO05D010052 6.0e-09 63.9 66 50.0
HPP92_008354 Vanilla planifolia HOM05D007885 ORTHO05D010052 6.0e-09 63.9 68 44.1
Eucgr.E01767 Eucalyptus grandis HOM05D007885 ORTHO05D010052 3.9e-08 61.2 50 60.0
CARHR039250 Cardamine hirsuta HOM05D007885 ORTHO05D010052 8.7e-08 60.1 66 45.5
vmacro13585 Vaccinium macrocarpon HOM05D007885 ORTHO05D010052 1.1e-07 59.7 112 41.1
PSO782G0684 Papaver somniferum HOM05D007885 ORTHO05D010052 1.5e-07 59.3 53 52.8
Sp1g36130 Schrenkiella parvula HOM05D007885 ORTHO05D010052 1.5e-07 59.3 72 44.4
AL1G56120 Arabidopsis lyrata HOM05D007885 ORTHO05D010052 1.9e-07 58.9 69 42.0
AL4G25080 Arabidopsis lyrata HOM05D007885 ORTHO05D010052 1.9e-07 58.9 69 42.0
PSO063G1811 Papaver somniferum HOM05D007885 ORTHO05D010052 1.9e-07 58.9 53 52.8
CDE02G4204 Ceratophyllum demersum HOM05D007885 ORTHO05D010052 2.5e-07 58.5 59 47.5
FvH4_7g07330 Fragaria vesca HOM05D007885 ORTHO05D010052 2.5e-07 58.5 49 63.3
FAN01G2012 Fragaria x ananassa HOM05D007885 ORTHO05D010052 2.5e-07 58.5 70 50.0
C08p04310 Brassica napus HOM05D007885 ORTHO05D010052 9.6e-07 56.6 68 45.6
A08p04120 Brassica napus HOM05D007885 ORTHO05D010052 1.2e-06 56.2 68 44.1
BraA08t32437Z Brassica rapa HOM05D007885 ORTHO05D010052 1.2e-06 56.2 68 44.1
RcHm_v2.0_Chr1g0337851 Rosa chinensis HOM05D007885 ORTHO05D010052 1.2e-06 56.2 47 59.6
AT1G49245 Arabidopsis thaliana HOM05D007885 ORTHO05D010052 1.6e-06 55.8 70 37.1
BcaC07g37071 Brassica carinata HOM05D007885 ORTHO05D010052 1.6e-06 55.8 68 44.1
RcHm_v2.0_Chr0c29g0501081 Rosa chinensis HOM05D007885 ORTHO05D010052 2.8e-06 55.1 52 53.8
CARHR040050 Cardamine hirsuta HOM05D007885 ORTHO05D010052 8.1e-06 53.5 66 42.4


User provided reference genes

Program Settings