Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.4X02I9 Arachis hypogaea HOM05D006034 ORTHO05D007535 5.8e-101 370.9 193 100.0
arahy.Tifrunner.gnm1.ann1.N9NTP8 Arachis hypogaea HOM05D000344 ORTHO05D005296 1.8e-41 173.3 107 80.4
arahy.Tifrunner.gnm1.ann1.9T8A1S Arachis hypogaea HOM05D006034 ORTHO05D007535 8.3e-39 164.5 92 87.0
arahy.Tifrunner.gnm1.ann1.VJWZ4U Arachis hypogaea HOM05D006034 ORTHO05D007535 8.3e-39 164.5 91 87.9
arahy.Tifrunner.gnm1.ann1.JYMB6X Arachis hypogaea HOM05D006034 ORTHO05D007535 3.1e-38 162.5 91 86.8
arahy.Tifrunner.gnm1.ann1.ZF8ARW Arachis hypogaea HOM05D006034 ORTHO05D007535 4.5e-37 158.7 92 82.6
TPR.G35498 Trifolium pratense HOM05D006034 ORTHO05D007535 1.6e-34 150.2 91 79.1
Glyma.07G128800 Glycine max HOM05D006034 ORTHO05D007535 3.6e-34 149.1 91 79.1
Medtr4g036675 Medicago truncatula HOM05D006034 ORTHO05D007535 8.0e-34 147.9 91 78.0
Glyma.01G003200 Glycine max HOM05D006034 ORTHO05D007535 3.4e-32 142.5 91 75.8
Lj2g0022455 Lotus japonicus HOM05D006034 ORTHO05D007535 3.4e-32 142.5 151 55.0
VMungo0464G0679 Vigna mungo HOM05D006034 ORTHO05D007535 3.4e-32 142.5 91 74.7
Lalb_Chr24g0393801 Lupinus albus HOM05D006034 ORTHO05D007535 5.7e-32 141.7 149 56.4
MSTRG.19527 Avicennia marina HOM05D006034 ORTHO05D007535 3.7e-31 139.0 91 70.3
Psat1g049600 Pisum sativum HOM05D006034 ORTHO05D007535 4.9e-31 138.7 91 73.6
Migut.J00593 Erythranthe guttata HOM05D006034 ORTHO05D007535 1.1e-30 137.5 91 72.5
Lj7C673T11 Lonicera japonica HOM05D006034 ORTHO05D007535 2.4e-30 136.3 91 70.3
QL02p062983 Quercus lobata HOM05D006034 ORTHO05D007535 2.4e-30 136.3 91 70.3
Actinidia25263 Actinidia chinensis HOM05D006034 ORTHO05D007535 3.2e-30 136.0 91 69.2
Oeu021834.2 Olea europaea HOM05D006034 ORTHO05D007535 7.0e-30 134.8 91 70.3
Ciclev10008848m.g Citrus clementina HOM05D006034 ORTHO05D007535 9.2e-30 134.4 91 70.3
COL.COLO4_18220 Corchorus olitorius HOM05D006034 ORTHO05D001756 9.2e-30 134.4 91 67.0
TAR636G0081 Trochodendron aralioides HOM05D006034 ORTHO05D007535 2.0e-29 133.3 91 69.2
Potri.006G150200 Populus trichocarpa HOM05D006034 ORTHO05D007535 2.7e-29 132.9 91 67.0
SGA_v2.0_scaffold62G21594 Striga asiatica HOM05D006034 ORTHO05D007535 3.5e-29 132.5 91 68.1
FAN26G1667 Fragaria x ananassa HOM05D006034 ORTHO05D007535 4.6e-29 132.1 91 64.8
AUR62031326 Chenopodium quinoa HOM05D006034 ORTHO05D007535 7.8e-29 131.3 91 65.9
Cc06_g11190 Coffea canephora HOM05D006034 ORTHO05D007535 7.8e-29 131.3 91 64.8
Duzib150G0162 Durio zibethinus HOM05D006034 ORTHO05D007535 7.8e-29 131.3 92 64.1
FAN23G1099 Fragaria x ananassa HOM05D006034 ORTHO05D007535 7.8e-29 131.3 91 64.8
Sabra06G0118900 Salix brachista HOM05D006034 ORTHO05D007535 7.8e-29 131.3 91 67.0
ECA234G0840 Erigeron canadensis HOM05D006034 ORTHO05D001756 1.0e-28 131.0 91 67.0
Manes.03G032201 Manihot esculenta HOM05D006034 ORTHO05D007535 1.0e-28 131.0 91 65.9
PGR142G3838 Punica granatum HOM05D006034 ORTHO05D007535 1.0e-28 131.0 91 67.0
CiPaw.03G217800 Carya illinoinensis HOM05D006034 ORTHO05D007535 1.3e-28 130.6 91 67.0
Lsat_1_v5_gn_5_145641 Lactuca sativa HOM05D006034 ORTHO05D007535 1.3e-28 130.6 91 67.0
RcHm_v2.0_Chr2g0093061 Rosa chinensis HOM05D006034 ORTHO05D007535 1.3e-28 130.6 91 63.7
PGSC0003DMG400000341 Solanum tuberosum HOM05D006034 ORTHO05D007535 1.7e-28 130.2 91 65.9
GSVIVG01015225001 Vitis vinifera HOM05D006034 ORTHO05D007535 1.7e-28 130.2 91 65.9
FvH4_1g22100 Fragaria vesca HOM05D006034 ORTHO05D007535 2.3e-28 129.8 91 63.7
FAN19G2130 Fragaria x ananassa HOM05D006034 ORTHO05D007535 2.3e-28 129.8 91 63.7
Thecc.09G091900 Theobroma cacao HOM05D006034 ORTHO05D007535 3.9e-28 129.0 91 64.8
Gohir.A06G071400 Gossypium hirsutum HOM05D006034 ORTHO05D007535 5.0e-28 128.6 91 63.7
HanXRQChr12g0354751 Helianthus annuus HOM05D006034 ORTHO05D007535 5.0e-28 128.6 91 64.8
Carub.0007s1101 Capsella rubella HOM05D006034 ORTHO05D007535 6.6e-28 128.3 91 64.8
CAN.G1241.18 Capsicum annuum HOM05D006034 ORTHO05D007535 6.6e-28 128.3 91 65.9
MD02G1076200 Malus domestica HOM05D006034 ORTHO05D007535 6.6e-28 128.3 91 63.7
TWI32G0461 Tripterygium wilfordii HOM05D006034 ORTHO05D007535 6.6e-28 128.3 91 64.8
BcaC09g51741 Brassica carinata HOM05D000577 ORTHO05D007535 1.5e-27 127.1 91 64.8
MD15G1204600 Malus domestica HOM05D006034 ORTHO05D007535 1.5e-27 127.1 91 63.7
FAN28G0362 Fragaria x ananassa HOM05D006034 ORTHO05D007535 2.5e-27 126.3 85 65.9
Gohir.D06G070100 Gossypium hirsutum HOM05D006034 ORTHO05D007535 2.5e-27 126.3 91 62.6
Gorai.010G081700 Gossypium raimondii HOM05D006034 ORTHO05D007535 2.5e-27 126.3 91 62.6
A08p19610 Brassica napus HOM05D006034 ORTHO05D007535 3.3e-27 125.9 91 64.8
C03p89230 Brassica napus HOM05D006034 ORTHO05D007535 3.3e-27 125.9 91 64.8
BolC3t21232H Brassica oleracea HOM05D006034 ORTHO05D007535 3.3e-27 125.9 91 64.8
BraA08t33919Z Brassica rapa HOM05D006034 ORTHO05D007535 3.3e-27 125.9 91 64.8
BcaC01g01176 Brassica carinata HOM05D006034 ORTHO05D007535 4.3e-27 125.6 91 63.7
Nn8g38904 Nelumbo nucifera HOM05D006034 ORTHO05D007535 5.6e-27 125.2 93 62.4
CARHR237370 Cardamine hirsuta HOM05D006034 ORTHO05D007535 9.5e-27 124.4 91 62.6
Eucgr.C00910 Eucalyptus grandis HOM05D006034 ORTHO05D007535 9.5e-27 124.4 91 61.5
CsaV3_1G040270 Cucumis sativus L. HOM05D006034 ORTHO05D007535 1.2e-26 124.0 94 61.7
MELO3C015455.2 Cucumis melo HOM05D006034 ORTHO05D007535 2.8e-26 122.9 91 63.7
Sp7g27400 Schrenkiella parvula HOM05D006034 ORTHO05D007535 2.8e-26 122.9 91 63.7
Sopen12g003720 Solanum pennellii HOM05D006034 ORTHO05D007535 4.7e-26 122.1 91 62.6
AL7G22860 Arabidopsis lyrata HOM05D006034 ORTHO05D007535 6.1e-26 121.7 89 62.9
PSO210G1139 Papaver somniferum HOM05D006034 ORTHO05D007535 6.1e-26 121.7 91 61.5
Sed0009633 Sechium edule HOM05D006034 ORTHO05D007535 1.0e-25 120.9 91 62.6
THA.LOC104807985 Tarenaya hassleriana HOM05D006034 ORTHO05D007535 1.0e-25 120.9 90 62.2
Prupe.7G212400 Prunus persica HOM05D006034 ORTHO05D007535 1.8e-25 120.2 91 60.4
BcaB03g12611 Brassica carinata HOM05D006034 ORTHO05D007535 2.3e-25 119.8 91 60.4
PSO210G3620 Papaver somniferum HOM05D006034 ORTHO05D007535 3.1e-25 119.4 91 60.4
Zm00001eb361670 Zea mays HOM05D006034 ORTHO05D007535 8.9e-25 117.9 91 57.1
Aqoxy7G04066 Aquilegia oxysepala HOM05D006034 ORTHO05D007535 1.2e-24 117.5 89 60.7
THA.LOC104827538 Tarenaya hassleriana HOM05D006034 ORTHO05D007535 1.5e-24 117.1 90 61.1
ATR0705G153 Amborella trichopoda HOM05D006034 ORTHO05D007535 5.8e-24 115.2 91 60.4
MD13G1273400 Malus domestica HOM05D006034 ORTHO05D007535 9.8e-24 114.4 89 59.6
Os01g0722100 Oryza sativa ssp. japonica HOM05D006034 ORTHO05D007535 9.8e-24 114.4 89 57.3
HPP92_023401 Vanilla planifolia HOM05D006034 ORTHO05D007535 6.4e-23 111.7 91 52.7
Aa31LG2G20940 Aethionema arabicum HOM05D006034 ORTHO05D007535 1.1e-22 110.9 107 51.4
SMO118G0489 Selaginella moellendorffii HOM05D006034 ORTHO05D007535 1.4e-22 110.5 87 56.3
Hund24744 Selenicereus undatus HOM05D006034 ORTHO05D007535 1.6e-21 107.1 145 44.1
Pp3c5_18660 Physcomitrium patens HOM05D006034 ORTHO05D007535 2.0e-21 106.7 91 52.7
THA.LOC104814611 Tarenaya hassleriana HOM05D006034 ORTHO05D007535 2.0e-21 106.7 107 52.3
arahy.Tifrunner.gnm1.ann1.UHY7MZ Arachis hypogaea HOM05D006034 ORTHO05D005279 4.6e-21 105.5 75 72.0
Mapoly0014s0071 Marchantia polymorpha HOM05D006034 ORTHO05D007535 4.6e-21 105.5 90 52.2
Atru.chr7.1566 Acer truncatum HOM05D006034 ORTHO05D007535 1.1e-19 100.9 63 74.6
SEGI_04673 Sequoiadendron giganteum HOM05D006034 ORTHO05D007535 1.5e-19 100.5 91 51.6
CBR_g36936 Chara braunii HOM05D006034 ORTHO05D007535 4.3e-19 99.0 92 50.0
arahy.Tifrunner.gnm1.ann1.8Z5VZA Arachis hypogaea HOM05D001596 ORTHO05D011602 1.6e-18 97.1 65 73.8
EL10Ac8g19307 Beta vulgaris HOM05D006034 ORTHO05D007535 2.1e-18 96.7 66 65.2
AUR62027411 Chenopodium quinoa HOM05D006034 ORTHO05D007535 3.6e-18 95.9 62 67.7
Hma1.2p1_0800F.1_g219990 Hydrangea macrophylla HOM05D006034 ORTHO05D007535 3.6e-18 95.9 62 71.0
arahy.Tifrunner.gnm1.ann1.C7GQ4M Arachis hypogaea HOM05D006034 ORTHO05D007535 4.7e-18 95.5 66 75.8
THA.LOC109116077 Tarenaya hassleriana HOM05D006034 ORTHO05D007535 1.1e-17 94.4 81 54.3
Solyc12g008790.3 Solanum lycopersicum HOM05D006034 ORTHO05D007535 5.2e-17 92.0 62 67.7
arahy.Tifrunner.gnm1.ann1.RIAB4B Arachis hypogaea HOM05D006034 ORTHO05D007535 1.5e-16 90.5 52 80.8
DCAR_011988 Daucus carota HOM05D006034 ORTHO05D007535 3.4e-16 89.4 64 68.8
AagrBONN_evm.TU.Sc2ySwM_228.1841 Anthoceros agrestis HOM05D006034 ORTHO05D007535 1.7e-15 87.0 77 51.9
SalBow6G0258 Salvia bowleyana HOM05D006034 ORTHO05D007535 3.7e-15 85.9 130 41.5
CSS0007101 Camellia sinensis var. sinensis HOM05D006034 ORTHO05D007535 1.4e-14 84.0 65 64.6
PRCOL_00006271 Prasinoderma coloniale HOM05D006034 ORTHO05D007535 4.6e-13 79.0 87 40.2
Thhalv10025613m.g Eutrema salsugineum HOM05D006034 ORTHO05D007535 5.1e-12 75.5 64 57.8
MD17G1181800 Malus domestica HOM05D006034 ORTHO05D007535 1.5e-11 73.9 50 66.0
MBI01_g02257_MAGBIO Magnolia biondii HOM05D006034 ORTHO05D007535 2.5e-11 73.2 94 41.5
arahy.Tifrunner.gnm1.ann1.7H2MWE Arachis hypogaea HOM05D006034 ORTHO05D084916 3.3e-11 72.8 81 55.6
Rhsim05G0022600 Rhododendron simsii HOM05D000085 ORTHO05D001756 1.6e-10 70.5 91 39.6
C01p09780 Brassica napus HOM05D006034 ORTHO05D007535 8.1e-10 68.2 52 59.6
arahy.Tifrunner.gnm1.ann1.SQM22L Arachis hypogaea HOM05D007334 ORTHO05D011873 6.8e-09 65.1 29 100.0
arahy.Tifrunner.gnm1.ann1.7FKA4B Arachis hypogaea HOM05D000428 ORTHO05D013763 1.3e-07 60.8 29 93.1
Ca_25619_v3 Cicer arietinum L. HOM05D006034 ORTHO05D007535 3.7e-07 59.3 28 89.3
arahy.Tifrunner.gnm1.ann1.P631HW Arachis hypogaea HOM05D000428 ORTHO05D011602 6.4e-07 58.5 29 93.1
arahy.Tifrunner.gnm1.ann1.SE9VZV Arachis hypogaea HOM05D000428 ORTHO05D013763 6.4e-07 58.5 43 67.4
C01p09940 Brassica napus HOM05D000577 ORTHO05D007535 6.4e-07 58.5 49 55.1
Haze_27155 Corylus avellana HOM05D003386 ORTHO05D007535 1.1e-06 57.8 70 38.6
CDE05G1399 Ceratophyllum demersum HOM05D006034 ORTHO05D007535 2.4e-06 56.6 52 50.0
Dinv36751 Davidia involucrata HOM05D006034 ORTHO05D007535 3.2e-06 56.2 42 61.9


User provided reference genes

Program Settings