Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.4WI1XR Arachis hypogaea HOM05D005969 ORTHO05D007407 8.1e-97 357.1 179 100.0
arahy.Tifrunner.gnm1.ann1.WI8D6W Arachis hypogaea HOM05D005969 ORTHO05D007407 1.4e-27 127.1 105 65.7
arahy.Tifrunner.gnm1.ann1.M9PPGY Arachis hypogaea HOM05D005969 ORTHO05D007407 3.0e-27 125.9 105 64.8
Phvul.010G161700 Phaseolus vulgaris HOM05D005969 ORTHO05D007407 3.7e-25 119.0 105 61.0
arahy.Tifrunner.gnm1.ann1.9VR9ZH Arachis hypogaea HOM05D005969 ORTHO05D007407 1.1e-24 117.5 106 61.3
VMungo0331G0028 Vigna mungo HOM05D005969 ORTHO05D007407 1.4e-24 117.1 105 60.0
CSS0032429 Camellia sinensis var. sinensis HOM05D005969 ORTHO05D007407 1.8e-24 116.7 105 60.0
Prupe.3G098800 Prunus persica HOM05D005969 ORTHO05D007407 4.1e-24 115.5 105 58.1
Lj3g0024544 Lotus japonicus HOM05D005969 ORTHO05D007407 5.3e-24 115.2 155 47.7
Glyma.08G219200 Glycine max HOM05D005969 ORTHO05D007407 7.0e-24 114.8 105 59.0
ClCG09G003350 Citrullus lanatus HOM05D005969 ORTHO05D007407 9.1e-24 114.4 105 59.0
FAN14G2562 Fragaria x ananassa HOM05D005969 ORTHO05D007407 1.2e-23 114.0 102 58.8
MELO3C023469.2 Cucumis melo HOM05D005969 ORTHO05D007407 1.6e-23 113.6 105 59.0
Nn6g31679 Nelumbo nucifera HOM05D005969 ORTHO05D007407 2.0e-23 113.2 105 58.1
FvH4_6g28580 Fragaria vesca HOM05D005969 ORTHO05D007407 2.6e-23 112.8 105 57.1
FAN02G2588 Fragaria x ananassa HOM05D005969 ORTHO05D007407 2.6e-23 112.8 105 57.1
FAN05G1215 Fragaria x ananassa HOM05D005969 ORTHO05D007407 2.6e-23 112.8 105 57.1
QL05p035856 Quercus lobata HOM05D005969 ORTHO05D007407 2.6e-23 112.8 105 57.1
Lalb_Chr01g0012061 Lupinus albus HOM05D005969 ORTHO05D007407 3.5e-23 112.5 105 57.1
Sed0009912 Sechium edule HOM05D005969 ORTHO05D007407 3.5e-23 112.5 105 57.1
Ca_20531_v3 Cicer arietinum L. HOM05D005969 ORTHO05D007407 4.5e-23 112.1 105 58.1
Psat7g262880 Pisum sativum HOM05D005969 ORTHO05D007407 7.7e-23 111.3 105 57.1
Cfa001877 Carpinus fangiana HOM05D005969 ORTHO05D007407 1.0e-22 110.9 105 56.2
Haze_16671 Corylus avellana HOM05D005969 ORTHO05D007407 1.0e-22 110.9 105 56.2
HanXRQChr14g0426701 Helianthus annuus HOM05D005969 ORTHO05D007407 1.0e-22 110.9 127 49.6
Manes.11G065200 Manihot esculenta HOM05D005969 ORTHO05D007407 1.0e-22 110.9 105 56.2
CiPaw.01G255000 Carya illinoinensis HOM05D005969 ORTHO05D007407 1.3e-22 110.5 105 56.2
RcHm_v2.0_Chr2g0132911 Rosa chinensis HOM05D005969 ORTHO05D007407 1.3e-22 110.5 105 55.2
Medtr4g007190 Medicago truncatula HOM05D005969 ORTHO05D007407 2.2e-22 109.8 105 55.2
Cpa.g.sc1250.2 Carica papaya HOM05D005969 ORTHO05D007407 2.9e-22 109.4 105 55.2
Actinidia18250 Actinidia chinensis HOM05D005969 ORTHO05D007407 3.8e-22 109.0 105 56.2
HanXRQChr04g0099681 Helianthus annuus HOM05D005969 ORTHO05D007407 3.8e-22 109.0 104 52.9
PGR102G2845 Punica granatum HOM05D005969 ORTHO05D007407 5.0e-22 108.6 105 55.2
TWI12G1191 Tripterygium wilfordii HOM05D005969 ORTHO05D007407 5.0e-22 108.6 105 55.2
CANSAT56G2142 Cannabis sativa HOM05D005969 ORTHO05D007407 6.5e-22 108.2 105 56.2
CsaV3_7G031880 Cucumis sativus L. HOM05D005969 ORTHO05D007407 6.5e-22 108.2 105 56.2
DCAR_021370 Daucus carota HOM05D005969 ORTHO05D007407 6.5e-22 108.2 105 58.1
Migut.I00689 Erythranthe guttata HOM05D005969 ORTHO05D007407 6.5e-22 108.2 105 55.2
PGSC0003DMG402028489 Solanum tuberosum HOM05D005969 ORTHO05D007407 6.5e-22 108.2 105 55.2
TAR628G0900 Trochodendron aralioides HOM05D005969 ORTHO05D007407 6.5e-22 108.2 105 54.3
Cc04_g05150 Coffea canephora HOM05D005969 ORTHO05D007407 8.5e-22 107.8 105 54.3
Eucgr.F03965 Eucalyptus grandis HOM05D005969 ORTHO05D007407 8.5e-22 107.8 105 54.3
Hund06517 Selenicereus undatus HOM05D005969 ORTHO05D007407 8.5e-22 107.8 105 55.2
Solyc06g068480.3 Solanum lycopersicum HOM05D005969 ORTHO05D007407 8.5e-22 107.8 105 54.3
Sopen06g025730 Solanum pennellii HOM05D005969 ORTHO05D007407 8.5e-22 107.8 105 54.3
Zm00001eb230040 Zea mays HOM05D005969 ORTHO05D007407 1.1e-21 107.5 105 56.2
Ah.01g024670 Amaranthus hybridus HOM05D005969 ORTHO05D007407 1.5e-21 107.1 107 53.3
Dinv23280 Davidia involucrata HOM05D005969 ORTHO05D007407 1.5e-21 107.1 105 54.3
CAN.G1932.3 Capsicum annuum HOM05D005969 ORTHO05D007407 1.9e-21 106.7 105 53.3
MD10G1047600 Malus domestica HOM05D005969 ORTHO05D007407 1.9e-21 106.7 105 54.3
Nitab4.5_0000886g0040 Nicotiana tabacum HOM05D005969 ORTHO05D007407 1.9e-21 106.7 105 54.3
Duzib235G1247 Durio zibethinus HOM05D005969 ORTHO05D007407 3.2e-21 105.9 105 54.3
Thecc.06G042200 Theobroma cacao HOM05D005969 ORTHO05D007407 4.2e-21 105.5 105 53.3
GSVIVG01015969001 Vitis vinifera HOM05D005969 ORTHO05D007407 5.5e-21 105.1 105 54.3
EL10Ac9g22204 Beta vulgaris HOM05D005969 ORTHO05D007407 7.2e-21 104.8 105 53.3
Sabra01G0030300 Salix brachista HOM05D005969 ORTHO05D007407 7.2e-21 104.8 105 51.4
Gohir.A05G118900 Gossypium hirsutum HOM05D005969 ORTHO05D007407 9.4e-21 104.4 105 54.3
Nitab4.5_0008962g0040 Nicotiana tabacum HOM05D005969 ORTHO05D007407 9.4e-21 104.4 105 53.3
Potri.001G044000 Populus trichocarpa HOM05D005969 ORTHO05D007407 1.2e-20 104.0 105 51.4
COL.COLO4_26714 Corchorus olitorius HOM05D005969 ORTHO05D007407 1.6e-20 103.6 105 51.4
Gohir.D05G119800 Gossypium hirsutum HOM05D005969 ORTHO05D007407 1.6e-20 103.6 105 54.3
Gorai.009G123400 Gossypium raimondii HOM05D005969 ORTHO05D007407 1.6e-20 103.6 105 54.3
Peaxi162Scf00207g00440 Petunia axillaris HOM05D005969 ORTHO05D007407 2.1e-20 103.2 106 51.9
MBI05_g33301_MAGBIO Magnolia biondii HOM05D005969 ORTHO05D007407 2.7e-20 102.8 107 52.3
unitig_27.g25102 Utricularia gibba HOM05D005969 ORTHO05D002795 2.7e-20 102.8 130 46.2
Aa31LG4G3330 Aethionema arabicum HOM05D005969 ORTHO05D007407 3.6e-20 102.4 105 51.4
Os02g0117100 Oryza sativa ssp. japonica HOM05D005969 ORTHO05D007407 4.7e-20 102.1 105 54.3
SalBow7G3052 Salvia bowleyana HOM05D005969 ORTHO05D007407 6.1e-20 101.7 105 51.4
SGA_v2.0_scaffold37G14696 Striga asiatica HOM05D005969 ORTHO05D007407 6.1e-20 101.7 105 52.4
ATR0807G102 Amborella trichopoda HOM05D005969 ORTHO05D007407 8.0e-20 101.3 105 51.4
ECA247G4019 Erigeron canadensis HOM05D005969 ORTHO05D007407 8.0e-20 101.3 105 48.6
MSTRG.22801 Avicennia marina HOM05D005969 ORTHO05D007407 1.4e-19 100.5 104 52.9
HanXRQChr04g0099721 Helianthus annuus HOM05D005969 ORTHO05D007407 1.4e-19 100.5 126 43.7
AUR62027000 Chenopodium quinoa HOM05D005969 ORTHO05D007407 1.8e-19 100.1 105 51.4
Ciclev10025812m.g Citrus clementina HOM05D005969 ORTHO05D007407 1.8e-19 100.1 105 52.4
Lsat_1_v5_gn_1_31041 Lactuca sativa HOM05D005969 ORTHO05D007407 1.8e-19 100.1 105 49.5
vmacro19064 Vaccinium macrocarpon HOM05D005969 ORTHO05D007407 1.8e-19 100.1 107 54.2
arahy.Tifrunner.gnm1.ann1.79PBZ8 Arachis hypogaea HOM05D005969 ORTHO05D007407 2.3e-19 99.8 90 63.3
THA.LOC104814755 Tarenaya hassleriana HOM05D005969 ORTHO05D007407 2.3e-19 99.8 105 51.4
AUR62030840 Chenopodium quinoa HOM05D005969 ORTHO05D007407 3.0e-19 99.4 105 51.4
Lj9C492T12 Lonicera japonica HOM05D005969 ORTHO05D007407 4.0e-19 99.0 105 51.4
Carub.0002s1982 Capsella rubella HOM05D005969 ORTHO05D007407 6.8e-19 98.2 105 49.5
arahy.Tifrunner.gnm1.ann1.UJC0YQ Arachis hypogaea HOM05D005969 ORTHO05D007407 8.8e-19 97.8 102 55.9
A07p39070 Brassica napus HOM05D005969 ORTHO05D007407 1.2e-18 97.4 105 49.5
C06p47280 Brassica napus HOM05D005969 ORTHO05D007407 1.2e-18 97.4 105 49.5
BolC6t39767H Brassica oleracea HOM05D005969 ORTHO05D007407 1.2e-18 97.4 105 49.5
BraA07t31457Z Brassica rapa HOM05D005969 ORTHO05D007407 1.2e-18 97.4 105 49.5
Thhalv10018762m.g Eutrema salsugineum HOM05D005969 ORTHO05D007407 1.2e-18 97.4 105 49.5
Sp5g28020 Schrenkiella parvula HOM05D005969 ORTHO05D007407 1.2e-18 97.4 105 49.5
CDE06G0123 Ceratophyllum demersum HOM05D005969 ORTHO05D007407 2.6e-18 96.3 105 48.6
Hma1.2p1_0109F.1_g052610 Hydrangea macrophylla HOM05D005969 ORTHO05D007407 5.7e-18 95.1 106 50.9
AT1G73060 Arabidopsis thaliana HOM05D005969 ORTHO05D007407 7.5e-18 94.7 105 48.6
Sc12g0005780 Simmondsia chinensis HOM05D005969 ORTHO05D007407 7.5e-18 94.7 105 47.6
HPP92_025442 Vanilla planifolia HOM05D005969 ORTHO05D007407 9.8e-18 94.4 159 38.4
Rhsim08G0203900 Rhododendron simsii HOM05D005969 ORTHO05D007407 1.7e-17 93.6 105 51.4
Aqoxy5G00978 Aquilegia oxysepala HOM05D005969 ORTHO05D007407 2.2e-17 93.2 105 43.8
PSO541G5031 Papaver somniferum HOM05D005969 ORTHO05D007407 3.7e-17 92.4 105 44.8
PSO675G4447 Papaver somniferum HOM05D005969 ORTHO05D007407 3.7e-17 92.4 105 44.8
AL2G32810 Arabidopsis lyrata HOM05D005969 ORTHO05D007407 8.3e-17 91.3 105 46.7
arahy.Tifrunner.gnm1.ann1.U87P2U Arachis hypogaea HOM05D005442 ORTHO05D006450 1.1e-16 90.9 89 59.6
HPP92_025491 Vanilla planifolia HOM05D005969 ORTHO05D007407 1.4e-16 90.5 105 47.6
Atru.chr10.2417 Acer truncatum HOM05D005969 ORTHO05D007407 5.9e-15 85.1 105 49.5
arahy.Tifrunner.gnm1.ann1.8T0BDM Arachis hypogaea HOM05D036300 ORTHO05D087530 2.9e-14 82.8 64 68.8
arahy.Tifrunner.gnm1.ann1.5US335 Arachis hypogaea HOM05D005969 ORTHO05D007407 3.6e-12 75.9 88 53.4
AagrBONN_evm.TU.Sc2ySwM_362.432 Anthoceros agrestis HOM05D005969 ORTHO05D007407 1.8e-11 73.6 112 38.4
CARHR066030 Cardamine hirsuta HOM05D005969 ORTHO05D007407 4.0e-11 72.4 107 41.1
Sc12g0008300 Simmondsia chinensis HOM05D005969 ORTHO05D007407 3.4e-10 69.3 90 44.4
Pp3c4_10300 Physcomitrium patens HOM05D005969 ORTHO05D007407 8.3e-09 64.7 112 37.5
SMO358G0640 Selaginella moellendorffii HOM05D005969 ORTHO05D007407 8.3e-09 64.7 105 35.2


User provided reference genes

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