Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.4SD1DS Arachis hypogaea HOM05D042360 ORTHO05D087173 1.0e-47 193.4 120 100.0
arahy.Tifrunner.gnm1.ann1.6B2DYJ Arachis hypogaea HOM05D000071 ORTHO05D013220 4.2e-17 91.7 45 91.1
arahy.Tifrunner.gnm1.ann1.XVY1F0 Arachis hypogaea HOM05D000071 ORTHO05D013220 3.0e-15 85.5 43 88.4
QL08p020060 Quercus lobata HOM05D000071 ORTHO05D000029 2.3e-10 69.3 90 41.1
Glyma.13G003500 Glycine max HOM05D000071 ORTHO05D000029 2.5e-09 65.9 107 33.6
Thecc.10G091700 Theobroma cacao HOM05D000071 ORTHO05D000029 4.2e-09 65.1 92 40.2
Peaxi162Scf01090g00004 Petunia axillaris HOM05D000071 ORTHO05D000029 7.2e-09 64.3 96 37.5
Medtr8g041150 Medicago truncatula HOM05D000071 ORTHO05D000029 1.6e-08 63.2 100 30.0
Nitab4.5_0004261g0060 Nicotiana tabacum HOM05D000071 ORTHO05D000029 2.1e-08 62.8 109 33.0
Gohir.A11G070200 Gossypium hirsutum HOM05D000071 ORTHO05D000029 3.6e-08 62.0 95 35.8
arahy.Tifrunner.gnm1.ann1.Z7E2B4 Arachis hypogaea HOM05D000071 ORTHO05D013220 8.0e-08 60.8 30 96.7
Gorai.007G079500 Gossypium raimondii HOM05D000071 ORTHO05D000029 1.0e-07 60.5 91 35.2
Gorai.007G340300 Gossypium raimondii HOM05D000071 ORTHO05D000029 1.0e-07 60.5 106 34.0
COL.COLO4_09603 Corchorus olitorius HOM05D000071 ORTHO05D000029 1.8e-07 59.7 97 34.0
GSVIVG01028966001 Vitis vinifera HOM05D000071 ORTHO05D000029 1.8e-07 59.7 92 34.8
Medtr7g014430 Medicago truncatula HOM05D000071 ORTHO05D000029 2.3e-07 59.3 106 31.1
Prupe.2G270200 Prunus persica HOM05D000071 ORTHO05D000029 2.3e-07 59.3 93 33.3
Duzib128G0835 Durio zibethinus HOM05D000071 ORTHO05D000029 3.0e-07 58.9 95 36.8
Duzib174G0001 Durio zibethinus HOM05D000071 ORTHO05D000029 3.0e-07 58.9 95 36.8
Glyma.16G184700 Glycine max HOM05D000071 ORTHO05D000029 4.0e-07 58.5 108 31.5
Gohir.D11G308250 Gossypium hirsutum HOM05D000071 ORTHO05D000029 5.2e-07 58.2 131 29.0
QL03p008495 Quercus lobata HOM05D000071 ORTHO05D000029 6.8e-07 57.8 98 36.7
arahy.Tifrunner.gnm1.ann1.JVHY6E Arachis hypogaea HOM05D042360 ORTHO05D000029 8.9e-07 57.4 73 60.3
Glyma.16G190500 Glycine max HOM05D000071 ORTHO05D000029 8.9e-07 57.4 115 28.7
Atru.chr2.3395 Acer truncatum HOM05D000071 ORTHO05D000029 1.2e-06 57.0 93 31.2
COL.COLO4_09602 Corchorus olitorius HOM05D000071 ORTHO05D000029 1.2e-06 57.0 97 32.0
Duzib177G0287 Durio zibethinus HOM05D000071 ORTHO05D000029 1.2e-06 57.0 90 32.2
TPR.G6238 Trifolium pratense HOM05D000071 ORTHO05D000029 1.5e-06 56.6 79 35.4
FvH4_7g26566 Fragaria vesca HOM05D000071 ORTHO05D000029 2.6e-06 55.8 108 31.5
Gohir.A11G294041 Gossypium hirsutum HOM05D000071 ORTHO05D000029 2.6e-06 55.8 131 28.2
Gohir.D11G307800 Gossypium hirsutum HOM05D000071 ORTHO05D000029 2.6e-06 55.8 131 30.5
Gorai.007G338300 Gossypium raimondii HOM05D000071 ORTHO05D000029 3.4e-06 55.5 131 29.8
Duzib177G0555 Durio zibethinus HOM05D000071 ORTHO05D000029 4.4e-06 55.1 90 32.2
Duzib177G0768 Durio zibethinus HOM05D000071 ORTHO05D000029 4.4e-06 55.1 90 32.2
Prupe.1G575200 Prunus persica HOM05D000071 ORTHO05D000029 4.4e-06 55.1 96 30.2
FvH4_7g26610 Fragaria vesca HOM05D000071 ORTHO05D000029 5.7e-06 54.7 75 36.0
MD01G1172300 Malus domestica HOM05D000071 ORTHO05D000029 7.5e-06 54.3 87 33.3
Glyma.16G188725 Glycine max HOM05D000071 ORTHO05D000029 9.8e-06 53.9 99 29.3
Gohir.D11G308466 Gossypium hirsutum HOM05D000071 ORTHO05D000029 9.8e-06 53.9 94 33.0
Gohir.D11G308866 Gossypium hirsutum HOM05D000071 ORTHO05D000029 9.8e-06 53.9 100 35.0
QL08p013118 Quercus lobata HOM05D000071 ORTHO05D000029 9.8e-06 53.9 87 29.9


User provided reference genes

Program Settings