Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.4R7L3N Arachis hypogaea HOM05D004120 ORTHO05D004951 2.5e-92 342.0 168 100.0
arahy.Tifrunner.gnm1.ann1.3C7WBJ Arachis hypogaea HOM05D004120 ORTHO05D004951 1.3e-61 240.0 195 70.3
arahy.Tifrunner.gnm1.ann1.7CR4HZ Arachis hypogaea HOM05D004120 ORTHO05D004951 1.7e-51 206.5 265 51.7
arahy.Tifrunner.gnm1.ann1.WRTU1C Arachis hypogaea HOM05D004120 ORTHO05D004951 8.2e-51 204.1 104 96.2
arahy.Tifrunner.gnm1.ann1.482M5A Arachis hypogaea HOM05D004120 ORTHO05D004951 4.1e-50 201.8 104 96.2
arahy.Tifrunner.gnm1.ann1.G7H05W Arachis hypogaea HOM05D004120 ORTHO05D004951 4.1e-50 201.8 104 96.2
arahy.Tifrunner.gnm1.ann1.K2V32T Arachis hypogaea HOM05D004120 ORTHO05D004951 5.3e-50 201.4 104 95.2
arahy.Tifrunner.gnm1.ann1.B3D4NA Arachis hypogaea HOM05D004120 ORTHO05D004951 2.9e-48 195.7 111 89.2
Lj2g0014948 Lotus japonicus HOM05D004120 ORTHO05D004951 1.1e-47 193.7 104 92.3
Lalb_Chr16g0379111 Lupinus albus HOM05D004120 ORTHO05D004951 1.4e-47 193.4 104 92.3
arahy.Tifrunner.gnm1.ann1.AE9Z3E Arachis hypogaea HOM05D004120 ORTHO05D004951 9.4e-47 190.7 111 87.4
Lalb_Chr05g0213941 Lupinus albus HOM05D004120 ORTHO05D004951 9.4e-47 190.7 104 90.4
Medtr5g014430 Medicago truncatula HOM05D004120 ORTHO05D004951 1.2e-46 190.3 104 89.4
Ca_24652_v3 Cicer arietinum L. HOM05D004120 ORTHO05D004951 2.1e-46 189.5 104 89.4
Psat2g173200 Pisum sativum HOM05D004120 ORTHO05D004951 2.7e-46 189.1 102 89.2
VMungo1215G0016 Vigna mungo HOM05D004120 ORTHO05D004951 4.7e-46 188.3 100 92.0
Glyma.11G043400 Glycine max HOM05D004120 ORTHO05D004951 7.9e-46 187.6 104 90.4
TPR.G7833 Trifolium pratense HOM05D004120 ORTHO05D004951 3.9e-45 185.3 100 89.0
vmacro00332 Vaccinium macrocarpon HOM05D004120 ORTHO05D004951 3.9e-45 185.3 102 88.2
AUR62018721 Chenopodium quinoa HOM05D004120 ORTHO05D004951 5.1e-45 184.9 100 87.0
GSVIVG01013166001 Vitis vinifera HOM05D004120 ORTHO05D004951 5.1e-45 184.9 98 90.8
CSS0046330 Camellia sinensis var. sinensis HOM05D004120 ORTHO05D004951 6.7e-45 184.5 104 87.5
Phvul.002G007300 Phaseolus vulgaris HOM05D004120 ORTHO05D004951 6.7e-45 184.5 100 90.0
Rhsim11G0014500 Rhododendron simsii HOM05D004120 ORTHO05D004951 6.7e-45 184.5 103 86.4
CiPaw.11G092700 Carya illinoinensis HOM05D004120 ORTHO05D004951 3.3e-44 182.2 128 74.2
ClCG10G001730 Citrullus lanatus HOM05D004120 ORTHO05D004951 4.4e-44 181.8 102 87.3
Cpa.g.sc239.7 Carica papaya HOM05D004120 ORTHO05D004951 7.4e-44 181.0 98 89.8
PGR031G2717 Punica granatum HOM05D004120 ORTHO05D004951 7.4e-44 181.0 100 88.0
Dinv25212 Davidia involucrata HOM05D004120 ORTHO05D004951 9.7e-44 180.6 102 86.3
Nn1g00518 Nelumbo nucifera HOM05D004120 ORTHO05D004951 9.7e-44 180.6 102 85.3
QL12p005624 Quercus lobata HOM05D004120 ORTHO05D004951 9.7e-44 180.6 96 90.6
Cfa012429 Carpinus fangiana HOM05D004120 ORTHO05D004951 1.3e-43 180.3 102 84.3
AUR62007285 Chenopodium quinoa HOM05D004120 ORTHO05D004951 1.3e-43 180.3 100 85.0
Hma1.2p1_0585F.1_g183700 Hydrangea macrophylla HOM05D004120 ORTHO05D004951 1.3e-43 180.3 102 86.3
Potri.001G143400 Populus trichocarpa HOM05D004120 ORTHO05D004951 1.7e-43 179.9 102 85.3
MELO3C013859.2 Cucumis melo HOM05D004120 ORTHO05D004951 2.2e-43 179.5 102 85.3
CsaV3_3G001840 Cucumis sativus L. HOM05D004120 ORTHO05D004951 2.2e-43 179.5 102 85.3
Dinv28953 Davidia involucrata HOM05D004120 ORTHO05D004951 2.8e-43 179.1 98 87.8
Eucgr.D02191 Eucalyptus grandis HOM05D004120 ORTHO05D004951 2.8e-43 179.1 96 89.6
Manes.17G013200 Manihot esculenta HOM05D004120 ORTHO05D004951 2.8e-43 179.1 99 85.9
Nitab4.5_0000804g0170 Nicotiana tabacum HOM05D004120 ORTHO05D004951 2.8e-43 179.1 103 83.5
Sed0006792 Sechium edule HOM05D004120 ORTHO05D004951 2.8e-43 179.1 102 86.3
Sc01g0007480 Simmondsia chinensis HOM05D004120 ORTHO05D004951 2.8e-43 179.1 102 84.3
TAR629G2715 Trochodendron aralioides HOM05D004120 ORTHO05D004951 2.8e-43 179.1 102 85.3
DCAR_008274 Daucus carota HOM05D004120 ORTHO05D004951 3.7e-43 178.7 103 84.5
Nn6g33597 Nelumbo nucifera HOM05D004120 ORTHO05D004951 4.8e-43 178.3 102 85.3
COL.COLO4_17048 Corchorus olitorius HOM05D004120 ORTHO05D004951 6.3e-43 177.9 102 83.3
Oeu053047.1 Olea europaea HOM05D004120 ORTHO05D004951 8.2e-43 177.6 98 85.7
CiPaw.12G063200 Carya illinoinensis HOM05D004120 ORTHO05D004951 1.1e-42 177.2 126 73.0
ECA240G4620 Erigeron canadensis HOM05D004120 ORTHO05D004951 1.1e-42 177.2 103 82.5
Gohir.A08G156900 Gossypium hirsutum HOM05D004120 ORTHO05D004951 1.1e-42 177.2 102 84.3
Gohir.D08G177300 Gossypium hirsutum HOM05D004120 ORTHO05D004951 1.1e-42 177.2 102 84.3
Peaxi162Scf00045g00028 Petunia axillaris HOM05D004120 ORTHO05D004951 1.1e-42 177.2 103 82.5
Ciclev10031866m.g Citrus clementina HOM05D004120 ORTHO05D004951 1.4e-42 176.8 98 86.7
Oeu028027.1 Olea europaea HOM05D004120 ORTHO05D004951 1.4e-42 176.8 103 81.6
EL10Ac5g12129 Beta vulgaris HOM05D004120 ORTHO05D004951 1.8e-42 176.4 98 83.7
Cc08_g02620 Coffea canephora HOM05D004120 ORTHO05D004951 1.8e-42 176.4 103 80.6
Gorai.004G185700 Gossypium raimondii HOM05D004120 ORTHO05D004951 1.8e-42 176.4 102 83.3
Lsat_1_v5_gn_6_79560 Lactuca sativa HOM05D004120 ORTHO05D004951 2.4e-42 176.0 103 81.6
PGSC0003DMG402001159 Solanum tuberosum HOM05D004120 ORTHO05D004951 2.4e-42 176.0 102 82.4
CAN.G1216.15 Capsicum annuum HOM05D004120 ORTHO05D004951 3.1e-42 175.6 104 82.7
MD00G1220600 Malus domestica HOM05D004120 ORTHO05D004951 4.1e-42 175.3 98 84.7
MD06G1033000 Malus domestica HOM05D004120 ORTHO05D004951 4.1e-42 175.3 98 84.7
Sopen08g001030 Solanum pennellii HOM05D004120 ORTHO05D004951 5.3e-42 174.9 102 82.4
Ah.12g054990 Amaranthus hybridus HOM05D004120 ORTHO05D004951 7.0e-42 174.5 99 82.8
ATR0049G040 Amborella trichopoda HOM05D004120 ORTHO05D004951 7.0e-42 174.5 100 81.0
Duzib084G1060 Durio zibethinus HOM05D004120 ORTHO05D004951 7.0e-42 174.5 102 81.4
HanXRQChr03g0084021 Helianthus annuus HOM05D004120 ORTHO05D004951 7.0e-42 174.5 103 81.6
MSTRG.13757 Avicennia marina HOM05D004120 ORTHO05D004951 9.1e-42 174.1 103 80.6
CDE03G0015 Ceratophyllum demersum HOM05D004120 ORTHO05D004951 9.1e-42 174.1 102 80.4
FAN04G1856 Fragaria x ananassa HOM05D004120 ORTHO05D004951 9.1e-42 174.1 98 84.7
FvH4_5g21880 Fragaria vesca HOM05D004120 ORTHO05D004951 1.6e-41 173.3 98 83.7
FAN18G3415 Fragaria x ananassa HOM05D004120 ORTHO05D004951 1.6e-41 173.3 98 83.7
TWI81G0459 Tripterygium wilfordii HOM05D004120 ORTHO05D004951 1.6e-41 173.3 97 85.6
ECA246G0968 Erigeron canadensis HOM05D004120 ORTHO05D004951 2.0e-41 172.9 102 79.4
Hund14402 Selenicereus undatus HOM05D004120 ORTHO05D004951 2.0e-41 172.9 98 84.7
PSO063G1634 Papaver somniferum HOM05D004120 ORTHO05D004951 2.6e-41 172.6 102 81.4
PSO782G3668 Papaver somniferum HOM05D004120 ORTHO05D004951 2.6e-41 172.6 102 81.4
CANSAT21G2618 Cannabis sativa HOM05D004120 ORTHO05D004951 3.5e-41 172.2 98 83.7
Thecc.03G228600 Theobroma cacao HOM05D004120 ORTHO05D004951 3.5e-41 172.2 102 81.4
RcHm_v2.0_Chr7g0209431 Rosa chinensis HOM05D004120 ORTHO05D004951 2.2e-40 169.5 100 82.0
Migut.E00930 Erythranthe guttata HOM05D004120 ORTHO05D004951 5.0e-40 168.3 101 79.2
THA.LOC104798329 Tarenaya hassleriana HOM05D004120 ORTHO05D004951 1.1e-39 167.2 104 76.9
Aqoxy3G02384 Aquilegia oxysepala HOM05D004120 ORTHO05D004951 1.5e-39 166.8 102 78.4
Os03g0100030 Oryza sativa ssp. japonica HOM05D004120 ORTHO05D004951 1.9e-39 166.4 123 65.0
SGA_v2.0_scaffold54G19447 Striga asiatica HOM05D004120 ORTHO05D004951 1.9e-39 166.4 109 74.3
THA.LOC104807951 Tarenaya hassleriana HOM05D004120 ORTHO05D004951 2.5e-39 166.0 98 80.6
Zm00001eb426630 Zea mays HOM05D004120 ORTHO05D004951 2.5e-39 166.0 123 65.9
HPP92_022143 Vanilla planifolia HOM05D004120 ORTHO05D004951 7.2e-39 164.5 148 61.5
Sabra01G0111800 Salix brachista HOM05D004120 ORTHO05D004951 9.4e-39 164.1 128 67.2
unitig_699.g19781 Utricularia gibba HOM05D004120 ORTHO05D004951 9.4e-39 164.1 100 79.0
BcaB02g09465 Brassica carinata HOM05D004120 ORTHO05D004951 1.2e-38 163.7 98 79.6
HPP92_022140 Vanilla planifolia HOM05D004120 ORTHO05D004951 1.2e-38 163.7 150 61.3
unitig_52.g17209 Utricularia gibba HOM05D004120 ORTHO05D004951 2.1e-38 162.9 100 76.0
Carub.0007s2352 Capsella rubella HOM05D004120 ORTHO05D004951 6.1e-38 161.4 155 56.1
A05p10510 Brassica napus HOM05D004120 ORTHO05D004951 1.0e-37 160.6 98 77.6
BraA05t19989Z Brassica rapa HOM05D004120 ORTHO05D004951 1.0e-37 160.6 98 77.6
Prupe.5G038500 Prunus persica HOM05D004120 ORTHO05D004951 1.0e-37 160.6 96 79.2
Sp4g17480 Schrenkiella parvula HOM05D004120 ORTHO05D004951 1.0e-37 160.6 98 77.6
AL4G31300 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 1.8e-37 159.8 98 76.5
AL716U10010 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 2.3e-37 159.5 98 76.5
BcaC02g11630 Brassica carinata HOM05D004120 ORTHO05D004951 2.3e-37 159.5 98 76.5
C04p12920 Brassica napus HOM05D004120 ORTHO05D004951 2.3e-37 159.5 98 76.5
BolC4t22936H Brassica oleracea HOM05D004120 ORTHO05D004951 2.3e-37 159.5 98 76.5
Aa31LG6G560 Aethionema arabicum HOM05D004120 ORTHO05D004951 3.0e-37 159.1 148 57.4
AT2G35260 Arabidopsis thaliana HOM05D004120 ORTHO05D004951 3.0e-37 159.1 98 76.5
C07p49190 Brassica napus HOM05D004120 ORTHO05D004951 4.0e-37 158.7 98 72.4
Thhalv10016805m.g Eutrema salsugineum HOM05D004120 ORTHO05D004951 4.0e-37 158.7 98 76.5
CARHR129420 Cardamine hirsuta HOM05D004120 ORTHO05D004951 6.7e-37 157.9 122 66.4
Carub.0004s1696 Capsella rubella HOM05D004120 ORTHO05D004951 8.8e-37 157.5 122 65.6
CARHR224560 Cardamine hirsuta HOM05D004120 ORTHO05D004951 1.5e-36 156.8 149 55.0
BcaC09g51598 Brassica carinata HOM05D004120 ORTHO05D004951 2.0e-36 156.4 98 72.4
A01p09890 Brassica napus HOM05D004120 ORTHO05D004951 2.0e-36 156.4 98 72.4
C01p11590 Brassica napus HOM05D004120 ORTHO05D004951 2.0e-36 156.4 98 72.4
BolC1t01127H Brassica oleracea HOM05D004120 ORTHO05D004951 2.0e-36 156.4 98 72.4
BraA01t00933Z Brassica rapa HOM05D004120 ORTHO05D004951 2.0e-36 156.4 98 72.4
BcaC01g05734 Brassica carinata HOM05D004120 ORTHO05D004951 2.6e-36 156.0 98 75.5
A03p19500 Brassica napus HOM05D004120 ORTHO05D004951 2.6e-36 156.0 98 75.5
A03p50800 Brassica napus HOM05D004120 ORTHO05D004951 2.6e-36 156.0 144 57.6
C03p22720 Brassica napus HOM05D004120 ORTHO05D004951 2.6e-36 156.0 98 75.5
BolC3t14671H Brassica oleracea HOM05D004120 ORTHO05D004951 2.6e-36 156.0 98 75.5
BraA03t11203Z Brassica rapa HOM05D004120 ORTHO05D004951 2.6e-36 156.0 98 75.5
BraA03t14169Z Brassica rapa HOM05D004120 ORTHO05D004951 2.6e-36 156.0 144 57.6
Sp7g16270 Schrenkiella parvula HOM05D004120 ORTHO05D004951 3.3e-36 155.6 149 55.7
AT4G17840 Arabidopsis thaliana HOM05D004120 ORTHO05D004951 4.4e-36 155.2 144 56.9
AL7G36690 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 5.7e-36 154.8 144 56.9
arahy.Tifrunner.gnm1.ann1.E125G1 Arachis hypogaea HOM05D004120 ORTHO05D004951 5.7e-36 154.8 77 97.4
Thhalv10025287m.g Eutrema salsugineum HOM05D004120 ORTHO05D004951 1.7e-35 153.3 144 56.9
BcaNung00052 Brassica carinata HOM05D004120 ORTHO05D004951 2.2e-35 152.9 144 56.2
arahy.Tifrunner.gnm1.ann1.BQ9W36 Arachis hypogaea HOM05D004120 ORTHO05D004951 2.8e-35 152.5 78 94.9
arahy.Tifrunner.gnm1.ann1.L0EJKI Arachis hypogaea HOM05D004120 ORTHO05D004951 6.3e-35 151.4 147 59.2
arahy.Tifrunner.gnm1.ann1.U1DJ88 Arachis hypogaea HOM05D004120 ORTHO05D007788 1.2e-33 147.1 79 92.4
SEGI_24472 Sequoiadendron giganteum HOM05D004120 ORTHO05D004951 2.0e-33 146.4 99 69.7
Aa31LG9G15290 Aethionema arabicum HOM05D004120 ORTHO05D004951 4.7e-30 135.2 137 55.5
Pp3c10_10980 Physcomitrium patens HOM05D004120 ORTHO05D004951 1.5e-28 130.2 95 62.1
Pp3c14_25270 Physcomitrium patens HOM05D004120 ORTHO05D004951 1.3e-27 127.1 98 60.2
Mapoly0008s0099 Marchantia polymorpha HOM05D004120 ORTHO05D004951 8.3e-27 124.4 137 49.6
SMO356G0344 Selaginella moellendorffii HOM05D004120 ORTHO05D004951 8.3e-27 124.4 95 57.9
BolC7t45429H Brassica oleracea HOM05D004120 ORTHO05D004951 7.0e-26 121.3 68 79.4
arahy.Tifrunner.gnm1.ann1.H82JQN Arachis hypogaea HOM05D004120 ORTHO05D021518 2.5e-23 112.8 188 41.5
Glyma.01G198500 Glycine max HOM05D004120 ORTHO05D004951 3.2e-23 112.5 59 89.8
arahy.Tifrunner.gnm1.ann1.RCE8PR Arachis hypogaea HOM05D004120 ORTHO05D004951 6.1e-22 108.2 55 94.5
Solyc08g005010.4 Solanum lycopersicum HOM05D004120 ORTHO05D004951 3.4e-20 102.4 55 85.5
Actinidia28172 Actinidia chinensis HOM05D004120 ORTHO05D004951 8.3e-19 97.8 52 88.5
AagrBONN_evm.TU.Sc2ySwM_117.2801 Anthoceros agrestis HOM05D010715 ORTHO05D004951 1.6e-17 93.6 73 58.9
CBR_g56906 Chara braunii HOM05D004120 ORTHO05D004951 1.3e-16 90.5 81 46.9
Atru.chr6.1717 Acer truncatum HOM05D004120 ORTHO05D004951 1.7e-08 63.5 36 80.6


User provided reference genes

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