Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.4PX4MG Arachis hypogaea HOM05D004812 ORTHO05D005721 6.2e-129 464.2 235 100.0
Haze_22372 Corylus avellana HOM05D004812 ORTHO05D005721 8.4e-86 320.9 225 71.6
Cfa013725 Carpinus fangiana HOM05D004812 ORTHO05D005721 1.9e-85 319.7 225 71.6
CiPaw.07G171000 Carya illinoinensis HOM05D004812 ORTHO05D005721 2.4e-85 319.3 221 72.4
Prupe.1G418000 Prunus persica HOM05D004812 ORTHO05D005721 2.4e-85 319.3 225 71.6
Lj1g0006267 Lotus japonicus HOM05D004812 ORTHO05D005721 2.3e-83 312.8 225 72.9
QL09p016104 Quercus lobata HOM05D004812 ORTHO05D005721 5.1e-83 311.6 221 71.0
Lalb_Chr23g0267661 Lupinus albus HOM05D004812 ORTHO05D005721 2.5e-82 309.3 227 70.0
Cpa.g.sc160.27 Carica papaya HOM05D004812 ORTHO05D005721 5.6e-82 308.1 232 69.0
FAN15G0694 Fragaria x ananassa HOM05D004812 ORTHO05D005721 1.6e-81 306.6 221 67.9
Lalb_Chr24g0399541 Lupinus albus HOM05D004812 ORTHO05D005721 1.6e-81 306.6 236 69.5
FvH4_2g32490 Fragaria vesca HOM05D004812 ORTHO05D005721 8.1e-81 304.3 221 67.4
Glyma.14G090500 Glycine max HOM05D004812 ORTHO05D005721 8.1e-81 304.3 235 68.9
Atru.chr13.882 Acer truncatum HOM05D004812 ORTHO05D005721 1.1e-80 303.9 216 71.3
Thecc.08G083100 Theobroma cacao HOM05D004812 ORTHO05D005721 1.1e-80 303.9 225 69.8
Duzib041G0573 Durio zibethinus HOM05D004812 ORTHO05D005721 1.8e-80 303.1 229 68.6
Glyma.04G048400 Glycine max HOM05D004812 ORTHO05D005721 1.8e-80 303.1 228 68.9
Gorai.009G222500 Gossypium raimondii HOM05D004812 ORTHO05D005721 1.8e-80 303.1 220 71.8
Potri.005G146600 Populus trichocarpa HOM05D004812 ORTHO05D005721 3.1e-80 302.4 222 69.8
CSS0032884 Camellia sinensis var. sinensis HOM05D004812 ORTHO05D005721 4.0e-80 302.0 222 68.5
Ca_06989_v3 Cicer arietinum L. HOM05D004812 ORTHO05D005721 5.3e-80 301.6 238 66.8
Duzib093G1850 Durio zibethinus HOM05D004812 ORTHO05D005721 9.0e-80 300.8 224 69.6
VMungo1309G0464 Vigna mungo HOM05D004812 ORTHO05D005721 1.2e-79 300.4 225 69.3
Duzib041G0236 Durio zibethinus HOM05D004812 ORTHO05D005721 1.5e-79 300.1 221 70.1
Manes.05G184100 Manihot esculenta HOM05D004812 ORTHO05D005721 1.5e-79 300.1 225 69.8
Phvul.001G031700 Phaseolus vulgaris HOM05D004812 ORTHO05D005721 1.5e-79 300.1 235 68.1
Glyma.06G049600 Glycine max HOM05D004812 ORTHO05D005721 2.6e-79 299.3 230 67.4
TAR381G1267 Trochodendron aralioides HOM05D004812 ORTHO05D005721 3.8e-78 295.4 223 66.4
Gohir.A05G212600 Gossypium hirsutum HOM05D004812 ORTHO05D005721 4.9e-78 295.0 220 70.5
CiPaw.08G053200 Carya illinoinensis HOM05D004812 ORTHO05D005721 8.4e-78 294.3 220 69.1
Nn6g34543 Nelumbo nucifera HOM05D004812 ORTHO05D005721 1.1e-77 293.9 226 68.1
Lj5g0016152 Lotus japonicus HOM05D004812 ORTHO05D005721 2.5e-77 292.7 233 68.2
Ca_15883_v3 Cicer arietinum L. HOM05D004812 ORTHO05D005721 9.3e-77 290.8 228 66.7
TWI56G0383 Tripterygium wilfordii HOM05D004812 ORTHO05D005721 1.6e-76 290.0 231 66.2
Dinv44924 Davidia involucrata HOM05D004812 ORTHO05D005721 2.7e-76 289.3 226 65.0
Sabra02G0090600 Salix brachista HOM05D004812 ORTHO05D005721 2.7e-76 289.3 224 66.1
arahy.Tifrunner.gnm1.ann1.HYM163 Arachis hypogaea HOM05D004812 ORTHO05D005721 7.9e-76 287.7 237 64.6
Potri.002G114600 Populus trichocarpa HOM05D004812 ORTHO05D005721 7.9e-76 287.7 222 67.6
ClCG08G016760 Citrullus lanatus HOM05D004812 ORTHO05D005721 1.0e-75 287.3 223 66.8
Cc10_g07760 Coffea canephora HOM05D004812 ORTHO05D005721 1.0e-75 287.3 222 66.2
Lj4A77G54 Lonicera japonica HOM05D004812 ORTHO05D005721 3.9e-75 285.4 239 63.6
TWI36G1081 Tripterygium wilfordii HOM05D004812 ORTHO05D005721 3.9e-75 285.4 223 68.2
arahy.Tifrunner.gnm1.ann1.PWJU0J Arachis hypogaea HOM05D004812 ORTHO05D005721 6.7e-75 284.6 237 64.1
MBI16_g36640_MAGBIO Magnolia biondii HOM05D004812 ORTHO05D005721 6.7e-75 284.6 248 60.9
Ciclev10002309m.g Citrus clementina HOM05D004812 ORTHO05D005721 8.7e-75 284.3 227 66.5
MELO3C010780.2 Cucumis melo HOM05D004812 ORTHO05D005721 3.3e-74 282.3 225 65.3
Gohir.D06G024100 Gossypium hirsutum HOM05D004812 ORTHO05D005721 4.3e-74 282.0 224 67.4
Gorai.010G028600 Gossypium raimondii HOM05D004812 ORTHO05D005721 4.3e-74 282.0 224 67.4
CsaV3_2G025860 Cucumis sativus L. HOM05D004812 ORTHO05D005721 5.7e-74 281.6 225 65.3
Psat6g018520 Pisum sativum HOM05D004812 ORTHO05D005721 2.1e-73 279.6 241 65.1
Peaxi162Scf01161g00329 Petunia axillaris HOM05D004812 ORTHO05D005721 2.8e-73 279.3 221 64.3
Psat5g042400 Pisum sativum HOM05D004812 ORTHO05D005721 8.2e-73 277.7 229 62.4
Gohir.A06G026800 Gossypium hirsutum HOM05D004812 ORTHO05D005721 1.4e-72 276.9 224 66.5
Actinidia19286 Actinidia chinensis HOM05D004812 ORTHO05D005721 1.8e-72 276.6 229 64.2
MSTRG.25014 Avicennia marina HOM05D004812 ORTHO05D005721 1.8e-72 276.6 231 64.1
Medtr1g017260 Medicago truncatula HOM05D004812 ORTHO05D005721 4.1e-72 275.4 240 64.6
TPR.G30200 Trifolium pratense HOM05D004812 ORTHO05D005721 5.3e-72 275.0 220 65.5
TPR.G13010 Trifolium pratense HOM05D004812 ORTHO05D005721 1.5e-71 273.5 241 61.4
vmacro04604 Vaccinium macrocarpon HOM05D004812 ORTHO05D005721 2.0e-71 273.1 221 62.4
Aa31sc619G20 Aethionema arabicum HOM05D004812 ORTHO05D005721 4.5e-71 271.9 223 62.8
RcHm_v2.0_Chr6g0310161 Rosa chinensis HOM05D004812 ORTHO05D005721 4.5e-71 271.9 221 62.4
Sed0005944 Sechium edule HOM05D004812 ORTHO05D005721 7.6e-71 271.2 221 62.9
FAN20G0597 Fragaria x ananassa HOM05D004812 ORTHO05D005721 1.0e-70 270.8 198 65.7
FAN27G1358 Fragaria x ananassa HOM05D004812 ORTHO05D005721 1.0e-70 270.8 198 65.7
THA.LOC104799834 Tarenaya hassleriana HOM05D004812 ORTHO05D005721 1.0e-70 270.8 223 63.7
Hma1.2p1_1230F.1_g268750 Hydrangea macrophylla HOM05D004812 ORTHO05D005721 1.7e-70 270.0 223 64.6
MD08G1076700 Malus domestica HOM05D004812 ORTHO05D005721 2.9e-70 269.2 225 63.1
arahy.Tifrunner.gnm1.ann1.FJ07HR Arachis hypogaea HOM05D004812 ORTHO05D005721 5.0e-70 268.5 131 98.5
MSTRG.923 Avicennia marina HOM05D004812 ORTHO05D005721 1.4e-69 266.9 225 62.7
Medtr3g103530 Medicago truncatula HOM05D004812 ORTHO05D005721 1.9e-69 266.5 227 60.8
Aqoxy6G02958 Aquilegia oxysepala HOM05D004812 ORTHO05D005721 3.2e-69 265.8 223 61.0
Rhsim07G0216800 Rhododendron simsii HOM05D004812 ORTHO05D005721 3.2e-69 265.8 324 48.1
Sp6g10230 Schrenkiella parvula HOM05D004812 ORTHO05D005721 3.2e-69 265.8 223 60.5
FAN24G1448 Fragaria x ananassa HOM05D004812 ORTHO05D005721 4.2e-69 265.4 198 64.1
MD15G1064000 Malus domestica HOM05D004812 ORTHO05D005721 4.2e-69 265.4 220 63.2
Eucgr.F02213 Eucalyptus grandis HOM05D004812 ORTHO05D005721 9.3e-69 264.2 218 64.7
Gohir.D05G215800 Gossypium hirsutum HOM05D004812 ORTHO05D005721 9.3e-69 264.2 197 69.5
GSVIVG01009286001 Vitis vinifera HOM05D004812 ORTHO05D005721 4.6e-68 261.9 223 62.8
Solyc04g077430.4 Solanum lycopersicum HOM05D004812 ORTHO05D005721 1.0e-67 260.8 236 59.7
CAN.G416.6 Capsicum annuum HOM05D004812 ORTHO05D005721 3.0e-67 259.2 233 60.5
Sopen04g031020 Solanum pennellii HOM05D004812 ORTHO05D005721 3.0e-67 259.2 236 59.3
AL6G41350 Arabidopsis lyrata HOM05D004812 ORTHO05D005721 3.9e-67 258.8 220 60.9
CARHR259230 Cardamine hirsuta HOM05D004812 ORTHO05D005721 3.9e-67 258.8 242 57.0
ECA232G4694 Erigeron canadensis HOM05D000006 ORTHO05D000001 5.1e-67 258.5 217 59.9
Thhalv10028923m.g Eutrema salsugineum HOM05D004812 ORTHO05D005721 1.5e-66 256.9 218 60.6
Nitab4.5_0001494g0140 Nicotiana tabacum HOM05D004812 ORTHO05D005721 4.3e-66 255.4 237 57.4
BcaB01g02879 Brassica carinata HOM05D004812 ORTHO05D005721 5.7e-66 255.0 220 59.1
Hund05266 Selenicereus undatus HOM05D004812 ORTHO05D005721 7.4e-66 254.6 235 60.0
Eucgr.F00104 Eucalyptus grandis HOM05D004812 ORTHO05D005721 9.7e-66 254.2 222 59.5
Migut.C00441 Erythranthe guttata HOM05D004812 ORTHO05D005721 3.7e-65 252.3 243 57.2
Dinv39198 Davidia involucrata HOM05D004812 ORTHO05D005721 6.3e-65 251.5 180 69.4
Lsat_1_v5_gn_9_79341 Lactuca sativa HOM05D004812 ORTHO05D005721 8.2e-65 251.1 225 58.7
BcaC01g04783 Brassica carinata HOM05D004812 ORTHO05D005721 2.4e-64 249.6 222 59.0
PGR031G3368 Punica granatum HOM05D004812 ORTHO05D005721 2.4e-64 249.6 218 61.0
Ah.05g166930 Amaranthus hybridus HOM05D004812 ORTHO05D005721 9.0e-64 247.7 215 62.3
Sc02g0008200 Simmondsia chinensis HOM05D004812 ORTHO05D005721 9.0e-64 247.7 168 73.2
C03p33720 Brassica napus HOM05D004812 ORTHO05D005721 1.2e-63 247.3 222 59.0
Actinidia29636 Actinidia chinensis HOM05D004812 ORTHO05D005721 1.5e-63 246.9 190 66.3
Migut.N02802 Erythranthe guttata HOM05D004812 ORTHO05D005721 3.4e-63 245.7 215 60.9
Carub.0006s2656 Capsella rubella HOM05D004812 ORTHO05D005721 4.5e-63 245.4 236 55.5
Nitab4.5_0024059g0010 Nicotiana tabacum HOM05D004812 ORTHO05D005721 1.0e-62 244.2 172 70.9
HanXRQChr08g0226381 Helianthus annuus HOM05D004812 ORTHO05D005721 6.5e-62 241.5 223 57.8
EL10Ac1g02340 Beta vulgaris HOM05D004812 ORTHO05D005721 8.5e-62 241.1 218 61.9
CANSAT11G0724 Cannabis sativa HOM05D004812 ORTHO05D005721 8.5e-62 241.1 229 57.6
Manes.18G050200 Manihot esculenta HOM05D004812 ORTHO05D005721 2.7e-60 236.1 180 68.3
Sabra05G0117000 Salix brachista HOM05D004812 ORTHO05D005721 2.7e-60 236.1 181 67.4
VMungo0647G0241 Vigna mungo HOM05D004812 ORTHO05D005721 6.1e-60 235.0 384 42.4
PSO541G3106 Papaver somniferum HOM05D004812 ORTHO05D005721 7.9e-60 234.6 220 56.4
PSO675G4508 Papaver somniferum HOM05D004812 ORTHO05D005721 1.5e-58 230.3 220 55.5
PGR083G2836 Punica granatum HOM05D004812 ORTHO05D005721 9.7e-58 227.6 221 56.1
Oeu048563.2 Olea europaea HOM05D004812 ORTHO05D005721 1.3e-57 227.3 223 54.7
HanXRQChr04g0110461 Helianthus annuus HOM05D004812 ORTHO05D005721 2.2e-57 226.5 224 55.4
Os03g0728100 Oryza sativa ssp. japonica HOM05D004812 ORTHO05D005721 4.8e-57 225.3 215 55.3
SGA_v2.0_scaffold238G43884 Striga asiatica HOM05D004812 ORTHO05D005721 4.8e-57 225.3 284 49.3
CDE02G0400 Ceratophyllum demersum HOM05D004812 ORTHO05D005721 1.1e-56 224.2 216 55.1
Rhsim06G0065600 Rhododendron simsii HOM05D004812 ORTHO05D005721 1.4e-56 223.8 224 55.4
AT4G07990 Arabidopsis thaliana HOM05D004812 ORTHO05D005721 6.9e-56 221.5 220 55.9
COL.COLO4_28448 Corchorus olitorius HOM05D004812 ORTHO05D005721 9.1e-56 221.1 169 68.0
ATR0019G011 Amborella trichopoda HOM05D004812 ORTHO05D005721 1.2e-55 220.7 175 64.0
Oeu038874.1 Olea europaea HOM05D004812 ORTHO05D005721 5.9e-55 218.4 145 72.4
AUR62039348 Chenopodium quinoa HOM05D004812 ORTHO05D005721 7.7e-55 218.0 245 53.1
PGSC0003DMG400004945 Solanum tuberosum HOM05D004812 ORTHO05D005721 1.3e-54 217.2 194 59.3
Duzib041G0112 Durio zibethinus HOM05D004812 ORTHO05D005721 1.1e-50 204.1 132 76.5
unitig_744.g24118 Utricularia gibba HOM05D004812 ORTHO05D005721 3.3e-50 202.6 217 55.3
Zm00001eb215650 Zea mays HOM05D004812 ORTHO05D005721 1.3e-46 190.7 203 49.8
Zm00001eb299310 Zea mays HOM05D004812 ORTHO05D005721 1.7e-46 190.3 215 51.2
HPP92_028656 Vanilla planifolia HOM05D004812 ORTHO05D005721 4.2e-45 185.7 177 57.1
ECA247G0897 Erigeron canadensis HOM05D004812 ORTHO05D005721 5.5e-45 185.3 173 54.9
vmacro21405 Vaccinium macrocarpon HOM05D004812 ORTHO05D005721 8.0e-44 181.4 183 54.6
BolC3t15691H Brassica oleracea HOM05D004812 ORTHO05D005721 1.3e-41 174.1 167 56.3
A03p27930 Brassica napus HOM05D004812 ORTHO05D005721 2.2e-41 173.3 167 56.3
BraA03t12006Z Brassica rapa HOM05D004812 ORTHO05D005721 2.2e-41 173.3 167 56.3
Os07g0124800 Oryza sativa ssp. japonica HOM05D004812 ORTHO05D005721 4.8e-41 172.2 215 49.3
CSS0043183 Camellia sinensis var. sinensis HOM05D004812 ORTHO05D005721 2.4e-40 169.9 179 53.6
Medtr3g103520 Medicago truncatula HOM05D004812 ORTHO05D005721 2.9e-38 162.9 182 49.5
AUR62034973 Chenopodium quinoa HOM05D004812 ORTHO05D005721 4.1e-32 142.5 178 50.0
Glyma.17G232245 Glycine max HOM05D004812 ORTHO05D005721 6.3e-25 118.6 129 55.0
Mapoly0153s0040 Marchantia polymorpha HOM05D004812 ORTHO05D005721 2.1e-20 103.6 186 38.2
HanXRQChr08g0231951 Helianthus annuus HOM05D004812 ORTHO05D005721 6.8e-19 98.6 81 58.0
HPP92_011733 Vanilla planifolia HOM05D004812 ORTHO05D005721 3.7e-17 92.8 63 68.3
Glyma.14G121300 Glycine max HOM05D004812 ORTHO05D005721 4.9e-17 92.4 63 68.3
Phvul.L001695 Phaseolus vulgaris HOM05D004812 ORTHO05D005721 1.1e-16 91.3 102 52.9
Mapoly0001s0190 Marchantia polymorpha HOM05D004812 ORTHO05D005721 2.0e-15 87.0 225 30.2
AagrBONN_evm.TU.Sc2ySwM_344.5440 Anthoceros agrestis HOM05D004812 ORTHO05D005721 5.9e-15 85.5 172 38.4
Pp3c17_7620 Physcomitrium patens HOM05D004812 ORTHO05D005721 7.8e-15 85.1 184 32.1
AagrBONN_evm.TU.Sc2ySwM_228.2797 Anthoceros agrestis HOM05D004812 ORTHO05D005721 1.1e-13 81.3 179 35.2
SMO351G0516 Selaginella moellendorffii HOM05D004812 ORTHO05D005721 1.2e-12 77.8 164 34.8
SEGI_24355 Sequoiadendron giganteum HOM05D004812 ORTHO05D005721 1.8e-11 73.9 56 62.5
Duzib041G0506 Durio zibethinus HOM05D004812 ORTHO05D005721 9.8e-10 68.2 88 48.9
Actinidia19589 Actinidia chinensis HOM05D004812 ORTHO05D005721 2.2e-09 67.0 45 68.9
HPP92_017696 Vanilla planifolia HOM05D004812 ORTHO05D005721 2.2e-09 67.0 96 43.8
HPP92_017697 Vanilla planifolia HOM05D001988 ORTHO05D006298 2.4e-08 63.5 43 67.4
HPP92_011732 Vanilla planifolia HOM05D004812 ORTHO05D005721 7.8e-07 58.5 80 50.0
PRCOL_00000327 Prasinoderma coloniale HOM05D000175 ORTHO05D000481 1.0e-06 58.2 64 43.8
Nn2g13067 Nelumbo nucifera HOM05D005011 ORTHO05D006443 2.3e-06 57.0 61 47.5
arahy.Tifrunner.gnm1.ann1.BXCF5W Arachis hypogaea HOM05D005011 ORTHO05D006443 3.0e-06 56.6 62 43.5
Ca_08838_v3 Cicer arietinum L. HOM05D005011 ORTHO05D006443 3.0e-06 56.6 62 43.5
Lalb_Chr20g0112801 Lupinus albus HOM05D005011 ORTHO05D006443 3.0e-06 56.6 62 45.2
Pp3c2_9790 Physcomitrium patens HOM05D005011 ORTHO05D006443 3.0e-06 56.6 63 47.6
Migut.L01677 Erythranthe guttata HOM05D005011 ORTHO05D006443 3.9e-06 56.2 61 45.9
Cc06_g03820 Coffea canephora HOM05D005011 ORTHO05D006443 5.0e-06 55.8 61 47.5
Lalb_Chr25g0289171 Lupinus albus HOM05D005011 ORTHO05D006443 5.0e-06 55.8 62 45.2
TPR.G18270 Trifolium pratense HOM05D005011 ORTHO05D006443 5.0e-06 55.8 62 45.2
Manes.09G069500 Manihot esculenta HOM05D005011 ORTHO05D006443 6.6e-06 55.5 61 47.5
CDE02G1038 Ceratophyllum demersum HOM05D005011 ORTHO05D006443 8.6e-06 55.1 61 44.3


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