Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.4PHV2I Arachis hypogaea HOM05D007641 ORTHO05D007630 0.0e+00 1488.0 749 100.0
arahy.Tifrunner.gnm1.ann1.F8RHVN Arachis hypogaea HOM05D007641 ORTHO05D007630 0.0e+00 1250.7 704 91.8
Glyma.18G052000 Glycine max HOM05D007641 ORTHO05D007630 8.0e-207 724.5 779 56.4
Lj6g0005873 Lotus japonicus HOM05D007641 ORTHO05D007630 4.3e-200 702.2 795 54.3
Lalb_Chr18g0054201 Lupinus albus HOM05D007641 ORTHO05D007630 3.4e-197 692.6 692 58.4
Phvul.006G079400 Phaseolus vulgaris HOM05D007641 ORTHO05D007630 5.8e-189 665.2 788 53.4
VMungo0540G0343 Vigna mungo HOM05D007641 ORTHO05D007630 1.7e-180 637.1 792 50.3
Psat5g147960 Pisum sativum HOM05D007641 ORTHO05D007630 7.8e-178 628.2 796 50.6
Medtr3g467390 Medicago truncatula HOM05D007641 ORTHO05D007630 1.9e-171 607.1 713 54.6
TPR.G13882 Trifolium pratense HOM05D007641 ORTHO05D007630 6.9e-158 562.0 754 48.3
Ca_15060_v3 Cicer arietinum L. HOM05D007641 ORTHO05D007630 5.3e-134 482.6 570 54.7
Dinv28733 Davidia involucrata HOM05D007641 ORTHO05D007630 3.3e-67 260.8 815 31.5
QL01p024477 Quercus lobata HOM05D007641 ORTHO05D007630 6.9e-65 253.1 819 31.7
Haze_24474 Corylus avellana HOM05D007641 ORTHO05D007630 1.6e-50 205.3 599 33.1
CiPaw.13G063300 Carya illinoinensis HOM05D007641 ORTHO05D007630 9.0e-49 199.5 754 30.6
RcHm_v2.0_Chr5g0073231 Rosa chinensis HOM05D007641 ORTHO05D007630 4.5e-48 197.2 812 29.6
Atru.chr10.2293 Acer truncatum HOM05D007641 ORTHO05D007630 1.0e-47 196.1 816 29.3
Glyma.11G198150 Glycine max HOM05D007641 ORTHO05D007630 6.5e-47 193.4 163 61.3
Glyma.11G198000 Glycine max HOM05D007641 ORTHO05D007630 1.4e-46 192.2 168 64.9
Thecc.09G364100 Theobroma cacao HOM05D007641 ORTHO05D007630 1.0e-44 186.0 812 28.9
Actinidia34497 Actinidia chinensis HOM05D007641 ORTHO05D007630 3.1e-41 174.5 809 28.3
Potri.013G157800 Populus trichocarpa HOM05D007641 ORTHO05D007630 2.6e-40 171.4 812 28.4
Sabra13G0126700 Salix brachista HOM05D007641 ORTHO05D002352 3.4e-40 171.0 742 29.9
Duzib168G1492 Durio zibethinus HOM05D007641 ORTHO05D007630 7.9e-37 159.8 790 28.5
CANSAT54G2173 Cannabis sativa HOM05D007641 ORTHO05D007630 1.3e-36 159.1 785 27.0
Prupe.6G040800 Prunus persica HOM05D007641 ORTHO05D007630 3.9e-36 157.5 764 28.1
vmacro14640 Vaccinium macrocarpon HOM05D007641 ORTHO05D007630 8.7e-36 156.4 696 28.0
FAN11G1956 Fragaria x ananassa HOM05D007641 ORTHO05D007630 1.4e-30 139.0 811 27.3
Nn2g10289 Nelumbo nucifera HOM05D007641 ORTHO05D007630 3.2e-30 137.9 790 27.3
FAN25G3378 Fragaria x ananassa HOM05D007641 ORTHO05D007630 8.8e-28 129.8 754 26.7
Rhsim01G0243500 Rhododendron simsii HOM05D007641 ORTHO05D007630 3.3e-27 127.9 727 26.3
Gorai.004G000600 Gossypium raimondii HOM05D007641 ORTHO05D007630 3.1e-25 121.3 632 28.5
FvH4_3g40550 Fragaria vesca HOM05D007641 ORTHO05D007630 5.3e-25 120.6 738 27.4
Manes.02G212232 Manihot esculenta HOM05D007641 ORTHO05D007630 5.3e-25 120.6 715 27.4
Ciclev10004023m.g Citrus clementina HOM05D007641 ORTHO05D007630 3.8e-23 114.4 241 36.9
FAN16G1217 Fragaria x ananassa HOM05D007641 ORTHO05D007630 5.0e-23 114.0 727 27.4
Sed0007856 Sechium edule HOM05D007641 ORTHO05D007630 6.5e-23 113.6 823 26.1
Sp4g13010 Schrenkiella parvula HOM05D001940 ORTHO05D007630 1.1e-22 112.8 523 26.8
TWI79G1607 Tripterygium wilfordii HOM05D007641 ORTHO05D007630 1.1e-22 112.8 725 26.6
THA.LOC104815825 Tarenaya hassleriana HOM05D001940 ORTHO05D007630 5.5e-22 110.5 454 30.8
Gohir.A08G000032 Gossypium hirsutum HOM05D007641 ORTHO05D007630 1.2e-21 109.4 743 26.2
AL4G25360 Arabidopsis lyrata HOM05D001940 ORTHO05D007630 2.7e-21 108.2 539 26.7
Gohir.D08G007350 Gossypium hirsutum HOM05D007641 ORTHO05D007630 3.6e-21 107.8 628 28.3
Migut.D00817 Erythranthe guttata HOM05D007641 ORTHO05D007630 1.0e-20 106.3 428 28.3
Hma1.2p1_0119F.1_g056956 Hydrangea macrophylla HOM05D007641 ORTHO05D007630 1.8e-20 105.5 513 27.1
Gohir.D12G000401 Gossypium hirsutum HOM05D007641 ORTHO05D007630 3.0e-20 104.8 701 27.5
AT2G30480 Arabidopsis thaliana HOM05D001940 ORTHO05D007630 6.7e-20 103.6 434 26.5
ClCG02G019020 Citrullus lanatus HOM05D007641 ORTHO05D007630 3.3e-19 101.3 808 25.0
Ca_15061_v3 Cicer arietinum L. HOM05D007641 ORTHO05D007630 1.7e-18 99.0 101 54.5
MBI15_g36478_MAGBIO Magnolia biondii HOM05D007641 ORTHO05D007630 4.8e-18 97.4 678 26.1
MELO3C019578.2 Cucumis melo HOM05D007641 ORTHO05D007630 8.2e-18 96.7 793 26.0
COL.COLO4_11217 Corchorus olitorius HOM05D007641 ORTHO05D007630 1.1e-17 96.3 621 25.1
Carub.0004s1164 Capsella rubella HOM05D001940 ORTHO05D007630 1.8e-17 95.5 460 25.4
TAR636G3352 Trochodendron aralioides HOM05D007641 ORTHO05D007630 2.6e-16 91.7 358 28.5
GSVIVG01024555001 Vitis vinifera HOM05D007641 ORTHO05D007630 5.9e-16 90.5 168 37.5
CsaV3_6G013130 Cucumis sativus L. HOM05D007641 ORTHO05D007630 1.1e-14 86.3 761 25.2
Sc23g0005090 Simmondsia chinensis HOM05D007641 ORTHO05D007630 9.4e-14 83.2 712 23.3
Aqoxy1G01263 Aquilegia oxysepala HOM05D007641 ORTHO05D007630 1.2e-13 82.8 633 23.2
MD11G1053300 Malus domestica HOM05D007641 ORTHO05D007630 2.7e-13 81.6 317 31.9
BcaC02g11137 Brassica carinata HOM05D001940 ORTHO05D007630 6.1e-13 80.5 446 27.1
BcaB02g10326 Brassica carinata HOM05D001940 ORTHO05D007630 1.4e-12 79.3 438 26.0
Oeu064683.1 Olea europaea HOM05D007641 ORTHO05D007630 1.4e-12 79.3 218 31.7
SGA_v2.0_scaffold20G09288 Striga asiatica HOM05D007641 ORTHO05D007630 2.3e-12 78.6 283 30.0
Gorai.012G000300 Gossypium raimondii HOM05D007641 ORTHO05D007630 6.7e-12 77.0 552 25.9
TAR633G1590 Trochodendron aralioides HOM05D007641 ORTHO05D007630 8.8e-12 76.6 448 28.6
Gohir.1Z049529 Gossypium hirsutum HOM05D007641 ORTHO05D007630 1.5e-11 75.9 458 25.8
HanXRQChr08g0230341 Helianthus annuus HOM05D007641 ORTHO05D007630 9.7e-11 73.2 471 26.8
ECA247G3209 Erigeron canadensis HOM05D007641 ORTHO05D007630 1.7e-10 72.4 608 25.0
Os01g0167700 Oryza sativa ssp. japonica HOM05D052079 ORTHO05D007630 2.8e-10 71.6 431 22.5
Cpa.g.sc2.293 Carica papaya HOM05D007641 ORTHO05D007630 3.7e-10 71.2 285 29.1
Hund18459 Selenicereus undatus HOM05D029401 ORTHO05D007630 1.1e-09 69.7 786 23.9
ATR1127G234 Amborella trichopoda HOM05D007641 ORTHO05D007630 4.1e-09 67.8 228 27.2
CARHR123930 Cardamine hirsuta HOM05D001940 ORTHO05D007630 9.1e-09 66.6 202 28.7
Thhalv10017756m.g Eutrema salsugineum HOM05D001940 ORTHO05D007630 4.5e-08 64.3 363 25.6
A05p14980 Brassica napus HOM05D001940 ORTHO05D007630 5.9e-08 63.9 511 25.2
PGR102G3245 Punica granatum HOM05D007641 ORTHO05D007630 1.0e-07 63.2 279 27.6
BolC4t23545H Brassica oleracea HOM05D001940 ORTHO05D007630 1.3e-07 62.8 284 27.5
Lalb_Chr18g0054191 Lupinus albus HOM05D007641 ORTHO05D007630 1.3e-07 62.8 45 66.7
Gorai.002G184200 Gossypium raimondii HOM05D007641 ORTHO05D007630 2.2e-07 62.0 170 30.6
PSO017G1347 Papaver somniferum HOM05D007641 ORTHO05D007630 2.2e-07 62.0 229 27.5
PSO170G4823 Papaver somniferum HOM05D007641 ORTHO05D007630 3.8e-07 61.2 228 28.9
Peaxi162Scf00605g00515 Petunia axillaris HOM05D014625 ORTHO05D007630 1.1e-06 59.7 463 24.6
Lsat_1_v5_gn_9_13760 Lactuca sativa HOM05D007641 ORTHO05D007630 1.5e-06 59.3 213 28.6
BraA05t20424Z Brassica rapa HOM05D001940 ORTHO05D007630 1.9e-06 58.9 275 26.9
Lj2A1102G26 Lonicera japonica HOM05D007641 ORTHO05D007630 3.2e-06 58.2 377 27.3


User provided reference genes

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