Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.4M0U4E Arachis hypogaea HOM05D005685 ORTHO05D007046 2.9e-304 1047.7 520 100.0
arahy.Tifrunner.gnm1.ann1.TIF1LK Arachis hypogaea HOM05D005685 ORTHO05D007046 1.3e-301 1038.9 518 99.0
Glyma.15G211900 Glycine max HOM05D005685 ORTHO05D007046 2.9e-219 765.4 521 74.9
Lalb_Chr19g0133681 Lupinus albus HOM05D005685 ORTHO05D007046 3.3e-215 751.9 523 73.6
Lj1g0015970 Lotus japonicus HOM05D005685 ORTHO05D007046 5.2e-213 744.6 522 73.6
Phvul.011G173500 Phaseolus vulgaris HOM05D005685 ORTHO05D007046 4.1e-210 734.9 522 71.3
VMungo1127G1789 Vigna mungo HOM05D005685 ORTHO05D007046 1.2e-204 716.8 521 69.1
Medtr8g461480 Medicago truncatula HOM05D005685 ORTHO05D007046 2.1e-185 652.9 517 66.3
Psat4g139160 Pisum sativum HOM05D005685 ORTHO05D007046 2.3e-184 649.4 525 65.0
TPR.G16474 Trifolium pratense HOM05D005685 ORTHO05D007046 8.4e-171 604.4 484 66.5
Dinv13349 Davidia involucrata HOM05D005685 ORTHO05D007046 2.1e-161 573.2 524 57.6
Haze_08449 Corylus avellana HOM05D005685 ORTHO05D007046 1.8e-160 570.1 514 61.7
CiPaw.11G154400 Carya illinoinensis HOM05D005685 ORTHO05D007046 3.0e-160 569.3 523 59.3
Ca_12745_v3 Cicer arietinum L. HOM05D005685 ORTHO05D007046 1.7e-150 537.0 471 61.6
Hma1.2p1_0713F.1_g207810 Hydrangea macrophylla HOM05D005685 ORTHO05D007046 3.1e-149 532.7 515 54.6
CSS0007667 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 2.9e-147 526.2 518 53.7
MD11G1273300 Malus domestica HOM05D005685 ORTHO05D007046 1.1e-146 524.2 514 55.4
TAR605G0002 Trochodendron aralioides HOM05D005685 ORTHO05D007046 1.9e-146 523.5 523 55.1
Sed0016294 Sechium edule HOM05D005685 ORTHO05D007046 2.7e-145 519.6 517 54.4
CANSAT56G0504 Cannabis sativa HOM05D005685 ORTHO05D007046 1.0e-144 517.7 513 55.4
Actinidia12613 Actinidia chinensis HOM05D005685 ORTHO05D007046 2.8e-142 509.6 514 52.9
Prupe.4G154100 Prunus persica HOM05D005685 ORTHO05D007046 2.8e-142 509.6 514 54.1
Cpa.g.sc77.65 Carica papaya HOM05D005685 ORTHO05D007046 3.7e-142 509.2 512 55.1
Nn1g00647 Nelumbo nucifera HOM05D005685 ORTHO05D007046 4.5e-140 502.3 533 52.2
CsaV3_4G032730 Cucumis sativus L. HOM05D005685 ORTHO05D007046 3.8e-139 499.2 514 52.9
ClCG11G017070 Citrullus lanatus HOM05D005685 ORTHO05D007046 6.5e-139 498.4 516 53.7
Manes.03G084500 Manihot esculenta HOM05D005685 ORTHO05D007046 1.9e-138 496.9 522 53.6
Ciclev10019120m.g Citrus clementina HOM05D005685 ORTHO05D007046 5.2e-136 488.8 524 53.4
Gohir.A11G290000 Gossypium hirsutum HOM05D005685 ORTHO05D007046 4.1e-133 479.2 518 52.7
GSVIVG01014072001 Vitis vinifera HOM05D005685 ORTHO05D007046 2.6e-132 476.5 512 52.7
Atru.chr2.1911 Acer truncatum HOM05D005685 ORTHO05D007046 1.0e-131 474.6 522 52.1
RhsimUnG0224400 Rhododendron simsii HOM05D005685 ORTHO05D007046 3.2e-130 469.5 544 47.8
MELO3C016678.2 Cucumis melo HOM05D005685 ORTHO05D007046 5.5e-130 468.8 584 46.9
Gohir.D11G302400 Gossypium hirsutum HOM05D005685 ORTHO05D007046 3.6e-129 466.1 519 52.0
Gorai.007G332400 Gossypium raimondii HOM05D005685 ORTHO05D007046 3.6e-129 466.1 519 51.8
Potri.001G380900 Populus trichocarpa HOM05D005685 ORTHO05D007046 3.6e-129 466.1 524 51.7
Sc03g0010780 Simmondsia chinensis HOM05D005685 ORTHO05D007046 8.0e-129 464.9 519 48.6
Sabra16G0251100 Salix brachista HOM05D005685 ORTHO05D007046 1.8e-128 463.8 524 51.3
EL10Ac4g08448 Beta vulgaris HOM05D005685 ORTHO05D007046 5.2e-128 462.2 525 48.0
COL.COLO4_17454 Corchorus olitorius HOM05D005685 ORTHO05D007046 6.8e-128 461.8 519 50.7
MSTRG.14992 Avicennia marina HOM05D005685 ORTHO05D007046 2.4e-125 453.4 520 47.5
Potri.011G102100 Populus trichocarpa HOM05D005685 ORTHO05D007046 2.7e-124 449.9 524 51.3
PGR031G3876 Punica granatum HOM05D005685 ORTHO05D007046 7.7e-124 448.4 530 51.1
Cc05_g10550 Coffea canephora HOM05D005685 ORTHO05D007046 1.3e-123 447.6 519 48.7
RhsimUnG0165000 Rhododendron simsii HOM05D005685 ORTHO05D007046 1.3e-123 447.6 474 50.8
RhsimUnG0060100 Rhododendron simsii HOM05D005685 ORTHO05D007046 1.7e-123 447.2 474 50.6
Sopen07g030310 Solanum pennellii HOM05D005685 ORTHO05D007046 5.0e-123 445.7 519 47.6
CSS0011531 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 6.5e-123 445.3 424 55.0
Solyc07g062050.3 Solanum lycopersicum HOM05D005685 ORTHO05D007046 1.1e-122 444.5 519 47.4
Sabra11G0083400 Salix brachista HOM05D005685 ORTHO05D007046 4.2e-122 442.6 525 50.7
FvH4_3g17370 Fragaria vesca HOM05D005685 ORTHO05D007046 8.0e-121 438.3 513 49.7
FAN16G1001 Fragaria x ananassa HOM05D005685 ORTHO05D007046 1.4e-120 437.6 513 49.9
CAN.G375.61 Capsicum annuum HOM05D005685 ORTHO05D007046 5.2e-120 435.6 523 47.0
DCAR_017584 Daucus carota HOM05D005685 ORTHO05D007046 2.0e-119 433.7 522 48.3
THA.LOC104808083 Tarenaya hassleriana HOM05D005685 ORTHO05D007046 4.4e-119 432.6 513 48.5
Thecc.07G137700 Theobroma cacao HOM05D005685 ORTHO05D007046 5.7e-119 432.2 453 53.9
SalBow8G2073 Salvia bowleyana HOM05D005685 ORTHO05D007046 9.8e-119 431.4 520 47.5
PSO063G4015 Papaver somniferum HOM05D005685 ORTHO05D007046 3.7e-118 429.5 521 47.2
Lsat_1_v5_gn_5_126281 Lactuca sativa HOM05D005685 ORTHO05D007046 1.4e-117 427.6 529 45.6
Peaxi162Scf00111g01236 Petunia axillaris HOM05D005685 ORTHO05D007046 1.8e-117 427.2 520 47.1
FAN21G3337 Fragaria x ananassa HOM05D005685 ORTHO05D007046 2.4e-117 426.8 548 47.3
Ah.03g134490 Amaranthus hybridus HOM05D005685 ORTHO05D007046 3.5e-116 422.9 526 45.1
AUR62019678 Chenopodium quinoa HOM05D005685 ORTHO05D007046 3.8e-115 419.5 531 45.8
FAN25G1369 Fragaria x ananassa HOM05D005685 ORTHO05D007046 3.8e-115 419.5 513 48.1
PSO782G3742 Papaver somniferum HOM05D005685 ORTHO05D007046 3.8e-115 419.5 521 46.3
Sp1g15160 Schrenkiella parvula HOM05D005685 ORTHO05D007046 8.6e-115 418.3 513 46.6
vmacro11986 Vaccinium macrocarpon HOM05D005685 ORTHO05D007046 4.3e-114 416.0 538 46.7
Lj1C822G13 Lonicera japonica HOM05D005685 ORTHO05D007046 5.6e-114 415.6 477 48.4
Aqoxy4G01266 Aquilegia oxysepala HOM05D005685 ORTHO05D007046 2.8e-113 413.3 524 46.2
FAN11G3672 Fragaria x ananassa HOM05D005685 ORTHO05D007046 3.6e-113 412.9 508 48.2
SGA_v2.0_scaffold73G24373 Striga asiatica HOM05D005685 ORTHO05D007046 1.2e-111 407.9 531 43.5
Migut.M00685 Erythranthe guttata HOM05D005685 ORTHO05D007046 2.0e-111 407.1 521 45.5
HanXRQChr10g0305611 Helianthus annuus HOM05D005685 ORTHO05D007046 3.4e-111 406.4 526 46.4
Thhalv10006979m.g Eutrema salsugineum HOM05D005685 ORTHO05D007046 1.3e-110 404.4 521 45.3
Duzib213G0171 Durio zibethinus HOM05D005685 ORTHO05D007046 3.7e-110 402.9 514 46.1
Cfa019501 Carpinus fangiana HOM05D005685 ORTHO05D007046 8.3e-110 401.7 369 62.1
CARHR017570 Cardamine hirsuta HOM05D005685 ORTHO05D007046 1.8e-109 400.6 539 44.3
BraA06t24453Z Brassica rapa HOM05D005685 ORTHO05D007046 2.0e-108 397.1 526 45.1
C05p15360 Brassica napus HOM05D005685 ORTHO05D007046 2.7e-108 396.7 530 44.7
BolC5t30242H Brassica oleracea HOM05D005685 ORTHO05D007046 7.8e-108 395.2 530 44.9
A06p12940 Brassica napus HOM05D005685 ORTHO05D007046 1.3e-107 394.4 531 44.8
Sp5g33630 Schrenkiella parvula HOM05D005685 ORTHO05D007046 3.9e-107 392.9 519 45.1
Thhalv10018251m.g Eutrema salsugineum HOM05D005685 ORTHO05D007046 3.3e-106 389.8 513 44.8
AL7G51000 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 9.5e-106 388.3 527 44.8
Carub.0001s1676 Capsella rubella HOM05D005685 ORTHO05D007046 1.4e-104 384.4 521 44.9
Aa31LG7G1870 Aethionema arabicum HOM05D005685 ORTHO05D007046 4.0e-104 382.9 523 45.5
AT1G78540 Arabidopsis thaliana HOM05D005685 ORTHO05D007046 1.9e-101 374.0 513 43.5
AT1G17040 Arabidopsis thaliana HOM05D005685 ORTHO05D007046 4.1e-101 372.9 520 43.8
PGSC0003DMG400007083 Solanum tuberosum HOM05D005685 ORTHO05D007046 1.6e-100 370.9 569 40.1
Carub.0002s2539 Capsella rubella HOM05D005685 ORTHO05D007046 4.6e-100 369.4 519 43.0
CARHR072030 Cardamine hirsuta HOM05D005685 ORTHO05D007046 3.0e-99 366.7 521 42.8
AUR62013935 Chenopodium quinoa HOM05D005685 ORTHO05D007046 5.6e-98 362.5 506 42.3
Aa31LG4G2430 Aethionema arabicum HOM05D005685 ORTHO05D007046 2.8e-97 360.1 513 42.3
ATR0665G442 Amborella trichopoda HOM05D005685 ORTHO05D007046 1.1e-88 331.6 503 41.2
AL1G29220 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 1.1e-88 331.6 475 43.4
AL2G38940 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 2.6e-87 327.0 467 43.5
ECA234G1223 Erigeron canadensis HOM05D005685 ORTHO05D007046 2.1e-84 317.4 493 41.4
Nitab4.5_0001140g0120 Nicotiana tabacum HOM05D005685 ORTHO05D007046 1.7e-83 314.3 520 38.8
unitig_747.g21593 Utricularia gibba HOM05D005685 ORTHO05D007046 4.0e-80 303.1 524 38.0
Zm00001eb004590 Zea mays HOM05D005685 ORTHO05D007046 2.9e-78 297.0 529 36.9
Pp3c20_21160 Physcomitrium patens HOM05D005685 ORTHO05D007046 3.2e-77 293.5 582 33.8
Eucgr.F03222 Eucalyptus grandis HOM05D005685 ORTHO05D007046 4.6e-76 289.7 326 49.7
CDE04G2909 Ceratophyllum demersum HOM05D005685 ORTHO05D007046 9.6e-74 282.0 315 48.9
AagrBONN_evm.TU.Sc2ySwM_228.1006 Anthoceros agrestis HOM05D005685 ORTHO05D007046 1.5e-71 274.6 570 34.7
SMO351G0414 Selaginella moellendorffii HOM05D005685 ORTHO05D007046 2.2e-70 270.8 532 36.7
Mapoly0011s0171 Marchantia polymorpha HOM05D005685 ORTHO05D007046 1.0e-67 261.9 546 34.8
BcaC05g25679 Brassica carinata HOM05D005685 ORTHO05D007046 2.1e-65 254.2 390 41.5
HPP92_014870 Vanilla planifolia HOM05D005685 ORTHO05D007046 4.0e-64 250.0 534 34.5
RhsimUnG0062900 Rhododendron simsii HOM05D005685 ORTHO05D007046 1.1e-61 241.9 292 47.9
SEGI_25985 Sequoiadendron giganteum HOM05D005685 ORTHO05D007046 7.1e-61 239.2 479 34.0
BcaB02g06680 Brassica carinata HOM05D005685 ORTHO05D007046 4.8e-57 226.5 346 42.5
Nitab4.5_0003618g0060 Nicotiana tabacum HOM05D005685 ORTHO05D007046 7.9e-44 182.6 518 29.3
DCAR_013783 Daucus carota HOM05D005685 ORTHO05D007046 1.5e-39 168.3 222 41.9
Eucgr.F03221 Eucalyptus grandis HOM05D005685 ORTHO05D007046 9.7e-34 149.1 205 43.4
MBI19_g17443_MAGBIO Magnolia biondii HOM05D005685 ORTHO05D007046 4.5e-31 140.2 109 67.0
Zm00001eb210210 Zea mays HOM05D005685 ORTHO05D007046 2.3e-27 127.9 153 47.1
Pp3c7_2410 Physcomitrium patens HOM05D005685 ORTHO05D007046 1.8e-19 101.7 149 42.3
Mapoly0028s0082 Marchantia polymorpha HOM05D005685 ORTHO05D007046 3.0e-19 100.9 159 39.0
SMO145G0004 Selaginella moellendorffii HOM05D005685 ORTHO05D007046 1.5e-18 98.6 178 42.1
CBR_g19551 Chara braunii HOM05D005685 ORTHO05D007046 2.6e-18 97.8 144 41.7
SEGI_34067 Sequoiadendron giganteum HOM05D005685 ORTHO05D007046 5.7e-18 96.7 125 40.8
RcHm_v2.0_Chr5g0028891 Rosa chinensis HOM05D005685 ORTHO05D007046 1.6e-15 88.6 75 56.0
CSS0003149 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 2.9e-14 84.3 82 51.2
CBR_g28498 Chara braunii HOM05D005685 ORTHO05D007046 4.2e-13 80.5 87 51.7
BraA06t26874Z Brassica rapa HOM05D005685 ORTHO05D007046 2.7e-12 77.8 195 33.8
TWI38G0887 Tripterygium wilfordii HOM05D005685 ORTHO05D007046 2.7e-12 77.8 51 68.6
MBI19_g17438_MAGBIO Magnolia biondii HOM05D005685 ORTHO05D007046 5.4e-08 63.5 54 59.3
SEGI_05558 Sequoiadendron giganteum HOM05D005685 ORTHO05D007046 2.0e-07 61.6 97 29.9
RcHm_v2.0_Chr5g0028901 Rosa chinensis HOM05D005685 ORTHO05D007046 2.9e-06 57.8 46 60.9
CDE04G0489 Ceratophyllum demersum HOM05D005685 ORTHO05D007046 5.0e-06 57.0 115 34.8


User provided reference genes

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