Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.4LX5KX Arachis hypogaea HOM05D002231 ORTHO05D006103 2.2e-100 369.0 196 100.0
arahy.Tifrunner.gnm1.ann1.A5UQ16 Arachis hypogaea HOM05D002231 ORTHO05D006103 2.2e-100 369.0 196 100.0
Glyma.11G250900 Glycine max HOM05D002231 ORTHO05D006103 5.0e-76 288.1 198 79.8
Glyma.18G006100 Glycine max HOM05D002231 ORTHO05D006103 8.6e-76 287.3 198 79.3
Psat5g096440 Pisum sativum HOM05D002231 ORTHO05D006103 1.9e-75 286.2 201 74.6
Medtr3g085280 Medicago truncatula HOM05D002231 ORTHO05D006103 5.6e-75 284.6 206 73.8
VMungo1383G1118 Vigna mungo HOM05D002231 ORTHO05D006103 1.6e-74 283.1 198 78.8
TPR.G17792 Trifolium pratense HOM05D002231 ORTHO05D006103 3.6e-74 282.0 203 73.9
Phvul.001G262200 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 4.0e-73 278.5 198 77.8
Prupe.1G225400 Prunus persica HOM05D002231 ORTHO05D006103 9.8e-72 273.9 207 72.9
MD16G1119800 Malus domestica HOM05D002231 ORTHO05D006103 3.7e-71 271.9 207 72.0
Cfa009373 Carpinus fangiana HOM05D002231 ORTHO05D006103 4.9e-71 271.6 208 70.7
Thecc.02G207900 Theobroma cacao HOM05D002231 ORTHO05D006103 1.1e-70 270.4 218 69.7
CiPaw.05G109300 Carya illinoinensis HOM05D002231 ORTHO05D006103 1.9e-70 269.6 209 71.8
Lalb_Chr23g0278101 Lupinus albus HOM05D002231 ORTHO05D006103 4.1e-70 268.5 194 72.7
GSVIVG01010488001 Vitis vinifera HOM05D002231 ORTHO05D006103 9.2e-70 267.3 207 70.5
MD13G1119600 Malus domestica HOM05D002231 ORTHO05D006103 1.6e-69 266.5 207 70.5
RcHm_v2.0_Chr4g0430201 Rosa chinensis HOM05D002231 ORTHO05D006103 1.6e-69 266.5 208 69.7
TWI36G0137 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 2.7e-69 265.8 202 71.8
Dinv10954 Davidia involucrata HOM05D002231 ORTHO05D006103 3.5e-69 265.4 212 71.7
CiPaw.06G102900 Carya illinoinensis HOM05D002231 ORTHO05D006103 6.0e-69 264.6 210 70.5
Lj6g0006303 Lotus japonicus HOM05D002231 ORTHO05D006103 7.8e-69 264.2 202 74.8
Actinidia30646 Actinidia chinensis HOM05D002231 ORTHO05D006103 3.0e-68 262.3 210 69.0
CANSAT01G1083 Cannabis sativa HOM05D002231 ORTHO05D006103 3.0e-68 262.3 210 70.0
Dinv17566 Davidia involucrata HOM05D002231 ORTHO05D005593 8.6e-68 260.8 209 68.4
Gorai.002G183300 Gossypium raimondii HOM05D002231 ORTHO05D006103 1.1e-67 260.4 214 68.2
Gohir.A01G160300 Gossypium hirsutum HOM05D002231 ORTHO05D006103 1.5e-67 260.0 215 68.8
Gohir.D01G147100 Gossypium hirsutum HOM05D002231 ORTHO05D006103 1.9e-67 259.6 214 68.7
CSS0047868 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 5.6e-67 258.1 212 67.5
CSS0048016 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 5.6e-67 258.1 212 67.5
Manes.12G011000 Manihot esculenta HOM05D002231 ORTHO05D006103 7.3e-67 257.7 219 68.0
Sc11g0000450 Simmondsia chinensis HOM05D002231 ORTHO05D006103 9.5e-67 257.3 226 65.9
FAN22G0585 Fragaria x ananassa HOM05D002231 ORTHO05D006103 1.6e-66 256.5 203 69.0
FAN17G0493 Fragaria x ananassa HOM05D002231 ORTHO05D005593 2.1e-66 256.1 207 68.6
Ciclev10032446m.g Citrus clementina HOM05D002231 ORTHO05D006103 1.1e-65 253.8 212 66.5
EL10Ac6g13507 Beta vulgaris HOM05D002231 ORTHO05D006103 5.2e-65 251.5 209 67.9
Hma1.2p1_0275F.1_g110740 Hydrangea macrophylla HOM05D002231 ORTHO05D006103 5.2e-65 251.5 224 63.8
Lalb_Chr08g0230621 Lupinus albus HOM05D002231 ORTHO05D006103 5.2e-65 251.5 206 66.5
Nn3g16455 Nelumbo nucifera HOM05D002231 ORTHO05D006103 1.5e-64 250.0 209 68.4
Potri.001G056500 Populus trichocarpa HOM05D002231 ORTHO05D006103 3.4e-64 248.8 213 68.1
AUR62028925 Chenopodium quinoa HOM05D002231 ORTHO05D006103 7.5e-64 247.7 203 67.5
Ca_16456_v3 Cicer arietinum L. HOM05D002231 ORTHO05D006103 7.5e-64 247.7 184 72.8
Sed0020663 Sechium edule HOM05D002231 ORTHO05D006103 1.7e-63 246.5 210 67.6
Aqoxy5G03366 Aquilegia oxysepala HOM05D002231 ORTHO05D006103 2.9e-63 245.7 165 80.6
MSTRG.501 Avicennia marina HOM05D002231 ORTHO05D006103 3.7e-63 245.4 213 64.3
FAN07G0699 Fragaria x ananassa HOM05D002231 ORTHO05D006103 4.9e-63 245.0 225 62.7
Sabra01G0040900 Salix brachista HOM05D002231 ORTHO05D006103 6.4e-63 244.6 224 66.1
Lsat_1_v5_gn_4_3541 Lactuca sativa HOM05D002231 ORTHO05D006103 8.3e-63 244.2 213 63.4
Cc11_g16940 Coffea canephora HOM05D002231 ORTHO05D006103 1.4e-62 243.4 133 91.7
Duzib251G0325 Durio zibethinus HOM05D002231 ORTHO05D006103 1.4e-62 243.4 223 63.2
FAN12G0590 Fragaria x ananassa HOM05D002231 ORTHO05D006103 2.4e-62 242.7 226 61.9
Manes.13G011701 Manihot esculenta HOM05D002231 ORTHO05D006103 3.2e-62 242.3 194 71.1
CsaV3_5G030240 Cucumis sativus L. HOM05D002231 ORTHO05D006103 5.4e-62 241.5 166 75.3
Gohir.A04G139800 Gossypium hirsutum HOM05D002231 ORTHO05D006103 1.2e-61 240.4 219 63.0
PSO017G2330 Papaver somniferum HOM05D002231 ORTHO05D006103 1.2e-61 240.4 205 66.3
PGR102G0892 Punica granatum HOM05D002231 ORTHO05D006103 2.1e-61 239.6 131 90.8
QL03p052604 Quercus lobata HOM05D002231 ORTHO05D006103 2.1e-61 239.6 258 57.4
SGA_v2.0_scaffold9G04675 Striga asiatica HOM05D002231 ORTHO05D006103 2.7e-61 239.2 211 63.0
Migut.J00960 Erythranthe guttata HOM05D002231 ORTHO05D006103 4.6e-61 238.4 133 88.7
Sopen04g017470 Solanum pennellii HOM05D002231 ORTHO05D006103 4.6e-61 238.4 207 65.7
CDE02G1146 Ceratophyllum demersum HOM05D002231 ORTHO05D006103 6.0e-61 238.0 200 66.0
Potri.003G172000 Populus trichocarpa HOM05D002231 ORTHO05D006103 6.0e-61 238.0 217 61.8
Eucgr.B03496 Eucalyptus grandis HOM05D002231 ORTHO05D006103 7.8e-61 237.7 133 88.7
MSTRG.8006 Avicennia marina HOM05D002231 ORTHO05D006103 1.7e-60 236.5 161 75.2
TWI18G1086 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 1.7e-60 236.5 188 69.7
Gohir.D04G183000 Gossypium hirsutum HOM05D002231 ORTHO05D006103 3.0e-60 235.7 168 73.2
Gorai.012G176000 Gossypium raimondii HOM05D002231 ORTHO05D006103 3.0e-60 235.7 168 73.2
Phvul.L002246 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 3.0e-60 235.7 205 66.8
Sabra03G0125900 Salix brachista HOM05D002231 ORTHO05D005593 6.6e-60 234.6 219 62.6
Nitab4.5_0002558g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 1.5e-59 233.4 207 64.7
unitig_747.g21125 Utricularia gibba HOM05D002231 ORTHO05D006103 1.5e-59 233.4 161 73.3
ECA234G2919 Erigeron canadensis HOM05D002231 ORTHO05D006103 2.5e-59 232.6 130 90.0
Glyma.08G104500 Glycine max HOM05D002231 ORTHO05D006103 2.5e-59 232.6 197 67.5
Atru.chr11.2328 Acer truncatum HOM05D002231 ORTHO05D006103 7.3e-59 231.1 196 66.8
Hund25467 Selenicereus undatus HOM05D002231 ORTHO05D006103 7.3e-59 231.1 211 60.2
THA.LOC104807538 Tarenaya hassleriana HOM05D002231 ORTHO05D006103 7.3e-59 231.1 215 60.5
Aa31LG7G9850 Aethionema arabicum HOM05D002231 ORTHO05D006103 2.8e-58 229.2 172 71.5
Rhsim12G0025500 Rhododendron simsii HOM05D002231 ORTHO05D006103 2.8e-58 229.2 200 64.0
Peaxi162Scf00518g00424 Petunia axillaris HOM05D002231 ORTHO05D006103 6.2e-58 228.0 150 80.0
MELO3C011862.2 Cucumis melo HOM05D002231 ORTHO05D006103 4.0e-57 225.3 166 72.3
Carub.0001s2592 Capsella rubella HOM05D002231 ORTHO05D006103 6.8e-57 224.6 153 75.8
AL1G40790 Arabidopsis lyrata HOM05D002231 ORTHO05D006103 1.2e-56 223.8 149 76.5
AT1G27385 Arabidopsis thaliana HOM05D002231 ORTHO05D006103 2.6e-56 222.6 151 76.2
FvH4_4g23720 Fragaria vesca HOM05D002231 ORTHO05D006103 3.4e-56 222.2 185 65.9
Sp1g23610 Schrenkiella parvula HOM05D002231 ORTHO05D006103 4.4e-56 221.9 149 76.5
Nitab4.5_0000067g0140 Nicotiana tabacum HOM05D002231 ORTHO05D006103 5.8e-56 221.5 232 57.8
CARHR026970 Cardamine hirsuta HOM05D002231 ORTHO05D006103 7.6e-56 221.1 149 75.8
TAR629G1028 Trochodendron aralioides HOM05D002231 ORTHO05D006103 7.6e-56 221.1 124 88.7
Ah.02g130890 Amaranthus hybridus HOM05D002231 ORTHO05D006103 1.7e-55 219.9 206 61.7
BolC5t31328H Brassica oleracea HOM05D002231 ORTHO05D006103 2.9e-55 219.2 132 82.6
ClCG11G013620 Citrullus lanatus HOM05D002231 ORTHO05D006103 4.9e-55 218.4 210 62.4
A09p38550 Brassica napus HOM05D002231 ORTHO05D006103 6.4e-55 218.0 133 82.0
C05p26090 Brassica napus HOM05D002231 ORTHO05D006103 6.4e-55 218.0 132 81.8
A07p11870 Brassica napus HOM05D002231 ORTHO05D006103 8.4e-55 217.6 133 82.0
BraA07t28971Z Brassica rapa HOM05D002231 ORTHO05D006103 8.4e-55 217.6 133 82.0
BcaC06g35283 Brassica carinata HOM05D002231 ORTHO05D006103 1.1e-54 217.2 133 81.2
C07p17810 Brassica napus HOM05D002231 ORTHO05D006103 1.1e-54 217.2 133 81.2
BolC7t42287H Brassica oleracea HOM05D002231 ORTHO05D006103 1.1e-54 217.2 133 81.2
Thhalv10008813m.g Eutrema salsugineum HOM05D002231 ORTHO05D006103 1.1e-54 217.2 133 82.0
vmacro01059 Vaccinium macrocarpon HOM05D002231 ORTHO05D006103 1.4e-54 216.9 130 80.8
BraA09t39361Z Brassica rapa HOM05D002231 ORTHO05D006103 2.4e-54 216.1 131 81.7
Lj4g0021495 Lotus japonicus HOM05D002231 ORTHO05D006103 2.4e-54 216.1 221 58.8
Lsat_1_v5_gn_3_31041 Lactuca sativa HOM05D002231 ORTHO05D006103 9.2e-54 214.2 206 59.7
Cpa.g.sc808.1 Carica papaya HOM05D002231 ORTHO05D006103 2.1e-53 213.0 120 88.3
Os04g0386500 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 1.7e-52 209.9 163 69.3
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 2.3e-52 209.5 188 63.3
Lj3C1069T6 Lonicera japonica HOM05D002231 ORTHO05D006103 6.6e-52 208.0 135 83.0
Solyc04g045580.4 Solanum lycopersicum HOM05D002231 ORTHO05D006103 8.7e-52 207.6 189 63.5
SalBow1G3407 Salvia bowleyana HOM05D002231 ORTHO05D006103 1.5e-51 206.8 285 46.3
Zm00001eb421060 Zea mays HOM05D002231 ORTHO05D006103 1.6e-50 203.4 131 77.1
MBI11_g05330_MAGBIO Magnolia biondii HOM05D002231 ORTHO05D006103 4.7e-50 201.8 188 63.3
SalBow8G1223 Salvia bowleyana HOM05D002231 ORTHO05D006103 4.7e-50 201.8 182 58.8
Duzib248G1458 Durio zibethinus HOM05D002231 ORTHO05D006103 6.2e-50 201.4 217 56.7
Os02g0507400 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 6.2e-50 201.4 133 71.4
HanXRQChr12g0385441 Helianthus annuus HOM05D002231 ORTHO05D006103 6.9e-49 198.0 151 68.2
ECA246G2515 Erigeron canadensis HOM05D002231 ORTHO05D006103 7.6e-48 194.5 131 69.5
AUR62005623 Chenopodium quinoa HOM05D002231 ORTHO05D006103 1.7e-47 193.4 209 57.4
HanXRQChr06g0174651 Helianthus annuus HOM05D002231 ORTHO05D006103 2.2e-47 193.0 208 51.0
Haze_12423 Corylus avellana HOM05D002231 ORTHO05D006103 2.1e-45 186.4 161 65.8
BcaB03g13989 Brassica carinata HOM05D002231 ORTHO05D006103 2.7e-45 186.0 114 81.6
Zm00001eb085510 Zea mays HOM05D002231 ORTHO05D006103 2.7e-45 186.0 190 58.9
BcaC05g26745 Brassica carinata HOM05D002231 ORTHO05D006103 6.0e-45 184.9 117 78.6
BcaC05g26552 Brassica carinata HOM05D002231 ORTHO05D006103 7.8e-45 184.5 114 80.7
Nn4g22308 Nelumbo nucifera HOM05D002231 ORTHO05D006103 1.7e-44 183.3 175 58.9
HanXRQChr08g0207851 Helianthus annuus HOM05D002231 ORTHO05D006103 1.3e-42 177.2 147 63.3
COL.COLO4_20407 Corchorus olitorius HOM05D002231 ORTHO05D006103 2.8e-42 176.0 171 60.2
ECA233G1565 Erigeron canadensis HOM05D002231 ORTHO05D006103 6.2e-42 174.9 131 68.7
DCAR_007004 Daucus carota HOM05D002231 ORTHO05D006103 3.1e-41 172.6 116 75.0
Oeu049136.1 Olea europaea HOM05D002231 ORTHO05D006103 1.5e-40 170.2 130 71.5
Pp3c15_19360 Physcomitrium patens HOM05D002231 ORTHO05D006103 2.0e-40 169.9 134 66.4
SMO246G0027 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 4.5e-40 168.7 130 63.8
arahy.Tifrunner.gnm1.ann1.1IJF7J Arachis hypogaea HOM05D002231 ORTHO05D006103 2.9e-39 166.0 199 51.8
AagrBONN_evm.TU.Sc2ySwM_368.423 Anthoceros agrestis HOM05D002231 ORTHO05D006103 6.4e-39 164.9 130 65.4
SMO364G0411 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 6.4e-39 164.9 131 64.1
Oeu029193.1 Olea europaea HOM05D002231 ORTHO05D006103 1.4e-38 163.7 163 61.3
SalBow2G1775 Salvia bowleyana HOM05D002231 ORTHO05D006103 3.2e-38 162.5 164 56.7
arahy.Tifrunner.gnm1.ann1.RN2E3G Arachis hypogaea HOM05D002231 ORTHO05D006103 5.4e-38 161.8 103 80.6
CBR_g57027 Chara braunii HOM05D002231 ORTHO05D006103 5.4e-38 161.8 133 59.4
Pp3c9_19480 Physcomitrium patens HOM05D002231 ORTHO05D006103 1.2e-37 160.6 136 61.8
Nitab4.5_0000155g0190 Nicotiana tabacum HOM05D002231 ORTHO05D006103 2.7e-37 159.5 114 71.1
ATR0059G025 Amborella trichopoda HOM05D002231 ORTHO05D006103 1.5e-35 153.7 103 77.7
Nitab4.5_0004003g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 7.4e-35 151.4 162 57.4
DCAR_026462 Daucus carota HOM05D002231 ORTHO05D006103 6.9e-33 144.8 143 58.0
Lsat_1_v5_gn_4_56001 Lactuca sativa HOM05D002231 ORTHO05D006103 7.4e-27 124.8 164 45.7
PRCOL_00004939 Prasinoderma coloniale HOM05D002231 ORTHO05D006103 1.2e-24 117.5 132 44.7
RcHm_v2.0_Chr3g0491761 Rosa chinensis HOM05D002231 ORTHO05D006103 3.2e-22 109.4 62 88.7
TAR383G1026 Trochodendron aralioides HOM05D002231 ORTHO05D006103 4.1e-17 92.4 96 60.4
Cre02.g074700 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 2.0e-16 90.1 130 39.2
Cre12.g508300 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 1.0e-15 87.8 88 51.1
MCO02G005 Micromonas commoda HOM05D003605 ORTHO05D004292 1.9e-14 83.6 116 36.2
CDE05G2241 Ceratophyllum demersum HOM05D001859 ORTHO05D001836 3.7e-10 69.3 51 64.7
TAR636G2964 Trochodendron aralioides HOM05D002231 ORTHO05D006103 5.9e-08 62.0 35 88.6
C02p58440 Brassica napus HOM05D001393 ORTHO05D032808 1.3e-07 60.8 39 69.2


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