Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.4LKL39 Arachis hypogaea HOM05D004671 ORTHO05D005638 1.1e-226 789.6 401 100.0
arahy.Tifrunner.gnm1.ann1.R5FQEP Arachis hypogaea HOM05D004671 ORTHO05D005638 2.0e-172 609.4 371 88.9
arahy.Tifrunner.gnm1.ann1.V0I5I8 Arachis hypogaea HOM05D004671 ORTHO05D005638 5.0e-155 551.6 352 84.7
arahy.Tifrunner.gnm1.ann1.U8RPI8 Arachis hypogaea HOM05D004671 ORTHO05D005638 1.8e-152 543.1 343 85.1
Lalb_Chr06g0161161 Lupinus albus HOM05D004671 ORTHO05D005638 4.6e-100 369.0 340 60.3
Phvul.007G071300 Phaseolus vulgaris HOM05D004671 ORTHO05D005638 4.8e-97 359.0 372 56.5
VMungo0720G2100 Vigna mungo HOM05D004671 ORTHO05D005638 1.4e-96 357.5 363 57.6
Glyma.20G159500 Glycine max HOM05D004671 ORTHO05D005638 2.6e-95 353.2 358 57.3
Glyma.10G234800 Glycine max HOM05D004671 ORTHO05D005638 7.6e-95 351.7 364 56.0
Ca_10754_v3 Cicer arietinum L. HOM05D004671 ORTHO05D005638 1.2e-84 317.8 339 54.0
Lj5g0019412 Lotus japonicus HOM05D004671 ORTHO05D005638 7.9e-84 315.1 324 55.6
CiPaw.03G107600 Carya illinoinensis HOM05D004671 ORTHO05D005638 8.7e-83 311.6 359 50.1
Thecc.03G178300 Theobroma cacao HOM05D004671 ORTHO05D005638 1.9e-82 310.5 356 49.2
Cpa.g.sc107.62 Carica papaya HOM05D004671 ORTHO05D005638 1.3e-81 307.8 337 49.6
TPR.G27007 Trifolium pratense HOM05D004671 ORTHO05D005638 2.4e-80 303.5 343 52.5
Psat6g198360 Pisum sativum HOM05D004671 ORTHO05D005638 1.5e-79 300.8 363 50.7
Cfa002753 Carpinus fangiana HOM05D004671 ORTHO05D005638 3.4e-79 299.7 350 47.4
Cfa022980 Carpinus fangiana HOM05D004671 ORTHO05D005638 8.4e-78 295.0 346 48.3
Dinv24388 Davidia involucrata HOM05D004671 ORTHO05D005638 2.5e-77 293.5 356 44.7
CANSAT21G1295 Cannabis sativa HOM05D004671 ORTHO05D005638 3.2e-77 293.1 347 49.0
CANSAT21G1725 Cannabis sativa HOM05D004671 ORTHO05D005638 5.5e-77 292.4 337 50.1
Medtr1g101100 Medicago truncatula HOM05D004671 ORTHO05D005638 9.3e-77 291.6 343 49.9
Ciclev10004721m.g Citrus clementina HOM05D004671 ORTHO05D005638 4.6e-76 289.3 353 47.9
COL.COLO4_14329 Corchorus olitorius HOM05D004671 ORTHO05D005638 8.7e-75 285.0 350 45.4
Gorai.006G048800 Gossypium raimondii HOM05D004671 ORTHO05D005638 2.5e-74 283.5 356 46.1
Gohir.D09G042500 Gossypium hirsutum HOM05D004671 ORTHO05D005638 3.3e-74 283.1 356 45.8
Duzib205G1877 Durio zibethinus HOM05D004671 ORTHO05D005638 4.3e-74 282.7 371 46.4
MD07G1271200 Malus domestica HOM05D004671 ORTHO05D005638 5.7e-74 282.3 349 46.4
Haze_25041 Corylus avellana HOM05D004671 ORTHO05D005638 7.4e-74 282.0 350 46.0
GSVIVG01028933001 Vitis vinifera HOM05D004671 ORTHO05D005638 1.3e-73 281.2 354 44.4
Gohir.A09G041700 Gossypium hirsutum HOM05D004671 ORTHO05D005638 1.6e-73 280.8 345 47.2
Atru.chr1.442 Acer truncatum HOM05D004671 ORTHO05D005638 3.7e-73 279.6 346 47.1
Eucgr.K00269 Eucalyptus grandis HOM05D004671 ORTHO05D005638 1.1e-72 278.1 347 45.8
Prupe.2G295500 Prunus persica HOM05D004671 ORTHO05D005638 3.4e-71 273.1 393 42.2
MD01G1202100 Malus domestica HOM05D004671 ORTHO05D005638 4.5e-71 272.7 350 46.3
Nn3g16880 Nelumbo nucifera HOM05D004671 ORTHO05D005638 5.9e-71 272.3 348 43.7
Manes.14G025200 Manihot esculenta HOM05D004671 ORTHO05D005638 7.6e-71 271.9 353 46.5
TAR629G1771 Trochodendron aralioides HOM05D004671 ORTHO05D005638 1.7e-70 270.8 349 44.7
ClCG05G008100 Citrullus lanatus HOM05D004671 ORTHO05D005638 8.5e-70 268.5 340 44.4
CsaV3_3G017180 Cucumis sativus L. HOM05D004671 ORTHO05D005638 1.4e-69 267.7 354 44.9
Haze_13677 Corylus avellana HOM05D004671 ORTHO05D005638 3.2e-69 266.5 342 46.2
PGR142G1152 Punica granatum HOM05D004671 ORTHO05D005638 3.9e-67 259.6 339 45.7
DCAR_015049 Daucus carota HOM05D004671 ORTHO05D005638 6.7e-67 258.8 359 42.1
vmacro09835 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 8.7e-67 258.5 334 44.0
DCAR_010301 Daucus carota HOM05D004671 ORTHO05D005638 1.1e-66 258.1 359 41.8
MELO3C031814.2 Cucumis melo HOM05D004671 ORTHO05D005638 4.3e-66 256.1 356 44.1
Peaxi162Scf00848g00012 Petunia axillaris HOM05D004671 ORTHO05D005638 5.7e-66 255.8 335 43.9
Rhsim09G0198100 Rhododendron simsii HOM05D004671 ORTHO05D005638 2.8e-65 253.4 362 42.0
Nitab4.5_0001951g0070 Nicotiana tabacum HOM05D004671 ORTHO05D005638 8.2e-65 251.9 343 41.7
FvH4_7g29570 Fragaria vesca HOM05D004671 ORTHO05D005638 1.2e-63 248.1 344 43.3
FAN10G4176 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.5e-63 247.7 351 42.7
FAN01G2609 Fragaria x ananassa HOM05D004671 ORTHO05D005638 2.0e-63 247.3 363 42.1
GSVIVG01017918001 Vitis vinifera HOM05D004671 ORTHO05D005638 2.6e-63 246.9 363 39.9
FAN10G3685 Fragaria x ananassa HOM05D004671 ORTHO05D005638 5.9e-63 245.7 351 42.5
ECA233G0868 Erigeron canadensis HOM05D004671 ORTHO05D005638 7.7e-63 245.4 351 43.3
FAN03G0738 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.3e-62 244.6 359 41.5
CAN.G208.79 Capsicum annuum HOM05D004671 ORTHO05D005638 2.2e-62 243.8 345 42.3
Potri.015G144900 Populus trichocarpa HOM05D004671 ORTHO05D005638 2.2e-62 243.8 351 42.5
QL09p013914 Quercus lobata HOM05D004671 ORTHO05D005638 2.2e-62 243.8 285 49.1
RcHm_v2.0_Chr1g0377571 Rosa chinensis HOM05D004671 ORTHO05D005638 2.2e-62 243.8 368 40.8
FAN06G5094 Fragaria x ananassa HOM05D004671 ORTHO05D005638 6.5e-62 242.3 351 42.7
Sed0027520 Sechium edule HOM05D004671 ORTHO05D005638 8.5e-62 241.9 349 41.8
Aa31LG4G17500 Aethionema arabicum HOM05D004671 ORTHO05D005638 2.5e-61 240.4 348 42.2
THA.LOC104818634 Tarenaya hassleriana HOM05D004671 ORTHO05D005638 2.5e-61 240.4 343 42.6
vmacro21316 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 2.5e-61 240.4 291 46.7
Solyc06g036000.4 Solanum lycopersicum HOM05D004671 ORTHO05D005638 5.5e-61 239.2 339 41.6
Cc02_g02840 Coffea canephora HOM05D004671 ORTHO05D005638 2.7e-60 236.9 336 39.6
FAN06G3892 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.8e-59 234.2 365 40.8
HanXRQChr15g0497081 Helianthus annuus HOM05D004671 ORTHO05D005638 1.8e-59 234.2 352 42.3
Aqoxy3G03421 Aquilegia oxysepala HOM05D004671 ORTHO05D005638 3.0e-59 233.4 349 41.5
HanXRQChr10g0304161 Helianthus annuus HOM05D004671 ORTHO05D005638 3.9e-59 233.0 353 41.6
HanXRQChr06g0163751 Helianthus annuus HOM05D004671 ORTHO05D005638 1.5e-58 231.1 346 41.3
Lsat_1_v5_gn_8_8441 Lactuca sativa HOM05D004671 ORTHO05D005638 2.0e-58 230.7 332 41.6
TWI14G0685 Tripterygium wilfordii HOM05D004671 ORTHO05D005638 2.0e-58 230.7 339 41.0
MSTRG.27109 Avicennia marina HOM05D004671 ORTHO05D005638 8.2e-57 225.3 359 38.2
Sabra15G0154400 Salix brachista HOM05D004671 ORTHO05D005638 1.4e-56 224.6 375 39.5
Thhalv10003189m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 1.2e-55 221.5 350 40.0
Lsat_1_v5_gn_3_14041 Lactuca sativa HOM05D004671 ORTHO05D005638 2.0e-55 220.7 339 40.7
Actinidia03123 Actinidia chinensis HOM05D004671 ORTHO05D005638 2.6e-55 220.3 302 42.4
AT3G49000 Arabidopsis thaliana HOM05D004671 ORTHO05D005638 1.3e-54 218.0 341 39.6
CARHR157820 Cardamine hirsuta HOM05D004671 ORTHO05D005638 1.3e-54 218.0 328 40.5
Thhalv10010290m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 1.3e-54 218.0 343 38.5
BcaB02g09572 Brassica carinata HOM05D004671 ORTHO05D005638 2.9e-54 216.9 346 38.4
Sp5g13050 Schrenkiella parvula HOM05D004671 ORTHO05D005638 5.0e-54 216.1 337 39.2
MD07G1271300 Malus domestica HOM05D004671 ORTHO05D005638 8.5e-54 215.3 237 49.8
BcaC01g02382 Brassica carinata HOM05D004671 ORTHO05D005638 1.1e-53 214.9 348 37.9
BolC3t18845H Brassica oleracea HOM05D004671 ORTHO05D005638 1.1e-53 214.9 348 37.9
PSO063G7539 Papaver somniferum HOM05D004671 ORTHO05D005638 1.9e-53 214.2 359 37.9
C03p65870 Brassica napus HOM05D004671 ORTHO05D005638 2.5e-53 213.8 348 37.6
Sopen06g011780 Solanum pennellii HOM05D004671 ORTHO05D005638 2.5e-53 213.8 291 43.0
PSO017G5643 Papaver somniferum HOM05D004671 ORTHO05D005638 3.2e-53 213.4 354 38.1
SHI26612 Sapria himalayana HOM05D004671 ORTHO05D005638 3.2e-53 213.4 346 38.7
A06p28000 Brassica napus HOM05D004671 ORTHO05D005638 5.5e-53 212.6 357 38.4
SGA_v2.0_scaffold60G21057 Striga asiatica HOM05D004671 ORTHO05D005638 5.5e-53 212.6 361 37.7
AL5G28510 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 9.4e-53 211.8 350 37.7
Sc13g0008790 Simmondsia chinensis HOM05D004671 ORTHO05D005638 9.4e-53 211.8 344 36.6
BraA06t25741Z Brassica rapa HOM05D004671 ORTHO05D005638 1.2e-52 211.5 348 38.5
Migut.K00770 Erythranthe guttata HOM05D004671 ORTHO05D005638 1.6e-52 211.1 341 37.0
AL6G42740 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 2.7e-52 210.3 342 37.4
SalBow1G2445 Salvia bowleyana HOM05D004671 ORTHO05D005638 3.6e-52 209.9 359 36.2
Carub.0005s1517 Capsella rubella HOM05D004671 ORTHO05D005638 6.1e-52 209.1 364 38.2
EL10Ac3g05622 Beta vulgaris HOM05D004671 ORTHO05D005638 2.3e-51 207.2 341 39.0
Sc13g0008760 Simmondsia chinensis HOM05D004671 ORTHO05D005638 5.7e-50 202.6 346 35.5
SalBow1G5895 Salvia bowleyana HOM05D004671 ORTHO05D005638 9.7e-50 201.8 369 35.2
Sed0007536 Sechium edule HOM05D004671 ORTHO05D005638 1.3e-49 201.4 275 44.0
CDE04G3622 Ceratophyllum demersum HOM05D004671 ORTHO05D005638 1.4e-48 198.0 296 38.5
RcHm_v2.0_Chr6g0258831 Rosa chinensis HOM05D004671 ORTHO05D005638 2.4e-48 197.2 353 36.8
CSS0035516 Camellia sinensis var. sinensis HOM05D004671 ORTHO05D005638 1.2e-47 194.9 232 46.6
ATR0737G144 Amborella trichopoda HOM05D004671 ORTHO05D005638 2.9e-46 190.3 349 37.5
Carub.0004s0531 Capsella rubella HOM05D004671 ORTHO05D005638 5.5e-45 186.0 339 35.1
AUR62015967 Chenopodium quinoa HOM05D004671 ORTHO05D005638 9.4e-45 185.3 360 35.3
Ah.13g068640 Amaranthus hybridus HOM05D004671 ORTHO05D005638 1.8e-40 171.0 354 34.5
AUR62021173 Chenopodium quinoa HOM05D004671 ORTHO05D005638 1.8e-40 171.0 326 35.9
unitig_37.g12531 Utricularia gibba HOM05D004671 ORTHO05D005638 4.1e-40 169.9 350 36.0
HPP92_020192 Vanilla planifolia HOM05D004671 ORTHO05D005638 4.1e-40 169.9 330 34.8
Mapoly0133s0004 Marchantia polymorpha HOM05D004671 ORTHO05D005638 5.0e-38 162.9 369 31.4
Oeu004097.1 Olea europaea HOM05D004671 ORTHO05D005638 1.1e-37 161.8 180 44.4
Ah.13g076510 Amaranthus hybridus HOM05D004671 ORTHO05D007692 2.1e-36 157.5 332 34.3
Pp3c16_7220 Physcomitrium patens HOM05D004671 ORTHO05D005638 4.7e-36 156.4 358 31.6
Sc13g0008680 Simmondsia chinensis HOM05D004671 ORTHO05D005638 1.4e-35 154.8 329 33.1
Nitab4.5_0000080g0100 Nicotiana tabacum HOM05D004671 ORTHO05D005638 1.5e-34 151.4 325 33.2
Migut.K01220 Erythranthe guttata HOM05D004671 ORTHO05D005638 2.8e-33 147.1 263 34.6
Hund04757 Selenicereus undatus HOM05D004671 ORTHO05D005638 8.3e-33 145.6 339 31.6
AagrBONN_evm.TU.Sc2ySwM_344.423 Anthoceros agrestis HOM05D004671 ORTHO05D005638 9.1e-32 142.1 354 30.5
HanXRQChr06g0163701 Helianthus annuus HOM05D001754 ORTHO05D005638 1.6e-31 141.4 316 33.2
arahy.Tifrunner.gnm1.ann1.X2DDWJ Arachis hypogaea HOM05D001074 ORTHO05D038832 1.3e-30 138.3 80 87.5
Os01g0679000 Oryza sativa ssp. japonica HOM05D004671 ORTHO05D005638 8.6e-30 135.6 320 30.3
Zm00001eb160040 Zea mays HOM05D004671 ORTHO05D005638 1.9e-29 134.4 352 28.7
arahy.Tifrunner.gnm1.ann1.674JY7 Arachis hypogaea HOM05D004671 ORTHO05D038832 1.2e-28 131.7 80 83.8
SMO143G0293 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 7.5e-26 122.5 354 30.2
SMO276G0042 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 3.7e-25 120.2 290 30.3
Oeu002719.1 Olea europaea HOM05D004671 ORTHO05D005638 1.4e-24 118.2 224 35.3
BcaB01g00761 Brassica carinata HOM05D004671 ORTHO05D005638 5.6e-21 106.3 150 38.0
BolC8t50021H Brassica oleracea HOM05D004671 ORTHO05D005638 6.8e-19 99.4 110 44.5
C08p23970 Brassica napus HOM05D004671 ORTHO05D005638 8.9e-19 99.0 109 45.9
BcaC07g39376 Brassica carinata HOM05D004671 ORTHO05D005638 1.1e-16 92.0 104 44.2
CBR_g5701 Chara braunii HOM05D004671 ORTHO05D005638 3.0e-14 84.0 187 28.9
MCO01G383 Micromonas commoda HOM05D004671 ORTHO05D005638 1.5e-13 81.6 230 25.7
Cre16.g673900 Chlamydomonas reinhardtii HOM05D004671 ORTHO05D005638 1.4e-11 75.1 254 25.2


User provided reference genes

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