Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.4HF8TC Arachis hypogaea HOM05D001055 ORTHO05D000867 6.7e-114 414.1 216 100.0
arahy.Tifrunner.gnm1.ann1.EV9M4R Arachis hypogaea HOM05D001055 ORTHO05D000867 4.8e-96 354.8 220 86.8
arahy.Tifrunner.gnm1.ann1.875LJI Arachis hypogaea HOM05D001055 ORTHO05D000867 4.5e-94 348.2 220 84.5
arahy.Tifrunner.gnm1.ann1.T194AB Arachis hypogaea HOM05D001055 ORTHO05D000867 7.2e-92 340.9 223 84.8
arahy.Tifrunner.gnm1.ann1.HD8J2L Arachis hypogaea HOM05D001055 ORTHO05D000867 2.1e-91 339.3 223 84.3
Phvul.006G093300 Phaseolus vulgaris HOM05D001055 ORTHO05D000867 1.2e-70 270.4 215 69.8
VMungo0540G2236 Vigna mungo HOM05D001055 ORTHO05D000867 1.7e-69 266.5 215 68.8
Ca_09366_v3 Cicer arietinum L. HOM05D001055 ORTHO05D000867 2.3e-69 266.2 220 67.7
Lj1g0015621 Lotus japonicus HOM05D001055 ORTHO05D000867 2.5e-68 262.7 216 68.1
TPR.G33215 Trifolium pratense HOM05D001055 ORTHO05D000867 4.3e-68 261.9 220 66.8
Psat3g010440 Pisum sativum HOM05D001055 ORTHO05D000867 5.6e-68 261.5 220 67.3
Glyma.03G239500 Glycine max HOM05D001055 ORTHO05D000867 2.1e-67 259.6 217 69.6
Medtr7g113730 Medicago truncatula HOM05D001055 ORTHO05D000867 2.3e-66 256.1 222 65.3
Lalb_Chr15g0077161 Lupinus albus HOM05D001055 ORTHO05D000867 1.1e-63 247.3 219 63.9
Sed0012937 Sechium edule HOM05D001055 ORTHO05D000867 4.6e-62 241.9 225 59.6
MD04G1207600 Malus domestica HOM05D001055 ORTHO05D000867 2.3e-61 239.6 226 61.1
ClCG03G016870 Citrullus lanatus HOM05D001055 ORTHO05D000867 3.3e-60 235.7 225 58.2
CiPaw.07G015700 Carya illinoinensis HOM05D001055 ORTHO05D000867 2.1e-59 233.0 226 58.0
CsaV3_1G039070 Cucumis sativus L. HOM05D001055 ORTHO05D000867 3.6e-59 232.3 225 59.1
arahy.Tifrunner.gnm1.ann1.L59R0S Arachis hypogaea HOM05D001055 ORTHO05D000867 6.2e-59 231.5 153 83.7
Prupe.6G328600 Prunus persica HOM05D001055 ORTHO05D000867 1.8e-58 229.9 226 59.3
AT1G08960 Arabidopsis thaliana HOM05D001055 ORTHO05D000867 3.1e-58 229.2 221 59.7
CANSAT54G0947 Cannabis sativa HOM05D001055 ORTHO05D000867 4.0e-58 228.8 226 58.8
Haze_04223 Corylus avellana HOM05D000665 ORTHO05D000140 5.2e-58 228.4 227 57.7
Thhalv10007271m.g Eutrema salsugineum HOM05D001055 ORTHO05D000867 5.2e-58 228.4 223 58.7
CARHR008860 Cardamine hirsuta HOM05D001055 ORTHO05D000867 6.8e-58 228.0 220 59.5
Sp1g07570 Schrenkiella parvula HOM05D001055 ORTHO05D000867 6.8e-58 228.0 223 58.7
Carub.0001s0827 Capsella rubella HOM05D001055 ORTHO05D000867 1.2e-57 227.3 224 57.1
PGR083G1012 Punica granatum HOM05D001055 ORTHO05D000867 1.2e-57 227.3 220 60.5
TWI56G1063 Tripterygium wilfordii HOM05D001055 ORTHO05D000867 1.5e-57 226.9 221 57.5
Aa31sc17G50 Aethionema arabicum HOM05D001055 ORTHO05D000867 3.4e-57 225.7 219 58.4
MELO3C015334.2 Cucumis melo HOM05D001055 ORTHO05D000867 3.4e-57 225.7 254 53.5
QL03p005172 Quercus lobata HOM05D001055 ORTHO05D000867 3.4e-57 225.7 225 56.4
QL03p006143 Quercus lobata HOM05D001055 ORTHO05D000867 3.4e-57 225.7 225 56.4
arahy.Tifrunner.gnm1.ann1.XD696N Arachis hypogaea HOM05D001055 ORTHO05D000867 4.4e-57 225.3 153 80.4
CSS0002251 Camellia sinensis var. sinensis HOM05D001055 ORTHO05D000867 4.4e-57 225.3 228 55.7
MD12G1221900 Malus domestica HOM05D001055 ORTHO05D000867 5.8e-57 224.9 226 59.3
Potri.013G025100 Populus trichocarpa HOM05D001055 ORTHO05D000867 7.5e-57 224.6 222 58.1
AL1G19390 Arabidopsis lyrata HOM05D001055 ORTHO05D000867 9.8e-57 224.2 221 57.5
Gohir.A11G263800 Gossypium hirsutum HOM05D001055 ORTHO05D000867 9.8e-57 224.2 222 55.0
COL.COLO4_13503 Corchorus olitorius HOM05D001055 ORTHO05D000867 1.3e-56 223.8 225 56.0
Gohir.D11G273900 Gossypium hirsutum HOM05D001055 ORTHO05D000867 1.3e-56 223.8 222 54.5
SGA_v2.0_scaffold81G26085 Striga asiatica HOM05D001055 ORTHO05D000867 1.3e-56 223.8 232 55.2
Atru.chr2.461 Acer truncatum HOM05D001055 ORTHO05D000867 1.7e-56 223.4 220 56.4
CAN.G1132.11 Capsicum annuum HOM05D001055 ORTHO05D000867 2.2e-56 223.0 229 56.3
Sabra13G0026300 Salix brachista HOM05D001055 ORTHO05D000867 2.2e-56 223.0 223 57.8
PGSC0003DMG400028607 Solanum tuberosum HOM05D001055 ORTHO05D000867 2.2e-56 223.0 229 55.5
Cfa006559 Carpinus fangiana HOM05D001055 ORTHO05D000867 3.7e-56 222.2 229 55.5
Gorai.007G295500 Gossypium raimondii HOM05D001055 ORTHO05D000867 3.7e-56 222.2 222 54.1
THA.LOC104820960 Tarenaya hassleriana HOM05D001055 ORTHO05D000867 3.7e-56 222.2 225 56.9
Sopen01g042340 Solanum pennellii HOM05D001055 ORTHO05D000867 4.9e-56 221.9 229 55.5
Cc02_g33650 Coffea canephora HOM05D001055 ORTHO05D000867 6.4e-56 221.5 236 53.4
Oeu027744.2 Olea europaea HOM05D001055 ORTHO05D000867 6.4e-56 221.5 230 56.5
Dinv40268 Davidia involucrata HOM05D001055 ORTHO05D000867 8.3e-56 221.1 226 55.8
Migut.N01950 Erythranthe guttata HOM05D001055 ORTHO05D000867 1.1e-55 220.7 226 57.1
CSS0018394 Camellia sinensis var. sinensis HOM05D001055 ORTHO05D000867 1.4e-55 220.3 214 58.4
Nitab4.5_0001643g0040 Nicotiana tabacum HOM05D001055 ORTHO05D000867 1.4e-55 220.3 231 54.5
Duzib177G0123 Durio zibethinus HOM05D001055 ORTHO05D000867 1.9e-55 219.9 224 55.4
Nitab4.5_0002031g0010 Nicotiana tabacum HOM05D001055 ORTHO05D000867 1.9e-55 219.9 232 55.2
GSVIVG01000027001 Vitis vinifera HOM05D001055 ORTHO05D000867 2.4e-55 219.5 226 56.6
Ciclev10000843m.g Citrus clementina HOM05D001055 ORTHO05D000867 4.1e-55 218.8 221 58.8
Thecc.05G306200 Theobroma cacao HOM05D001055 ORTHO05D000867 7.1e-55 218.0 228 53.9
BolC8t52501H Brassica oleracea HOM05D001055 ORTHO05D000867 9.2e-55 217.6 223 56.1
Solyc01g098800.4 Solanum lycopersicum HOM05D001055 ORTHO05D000867 9.2e-55 217.6 229 54.6
CSS0031507 Camellia sinensis var. sinensis HOM05D001055 ORTHO05D000867 1.2e-54 217.2 212 57.5
Lsat_1_v5_gn_2_64181 Lactuca sativa HOM05D001055 ORTHO05D000867 1.2e-54 217.2 222 53.2
A09p65660 Brassica napus HOM05D001055 ORTHO05D000867 1.6e-54 216.9 221 57.0
BraA09t41910Z Brassica rapa HOM05D001055 ORTHO05D000867 1.6e-54 216.9 221 57.0
SalBow3G0628 Salvia bowleyana HOM05D001055 ORTHO05D000867 1.6e-54 216.9 229 55.0
DCAR_029429 Daucus carota HOM05D001055 ORTHO05D000867 2.1e-54 216.5 220 55.9
C08p49740 Brassica napus HOM05D001055 ORTHO05D000867 2.7e-54 216.1 222 57.7
Oeu023742.1 Olea europaea HOM05D001055 ORTHO05D000867 4.6e-54 215.3 226 55.3
HanXRQChr14g0446401 Helianthus annuus HOM05D001055 ORTHO05D000867 6.0e-54 214.9 219 55.7
Manes.09G164900 Manihot esculenta HOM05D001055 ORTHO05D000867 7.8e-54 214.5 220 56.8
BcaC07g41914 Brassica carinata HOM05D001055 ORTHO05D000867 1.0e-53 214.2 222 55.9
Manes.08G122500 Manihot esculenta HOM05D001055 ORTHO05D000867 2.3e-53 213.0 220 55.5
FAN02G2356 Fragaria x ananassa HOM05D001055 ORTHO05D000867 3.0e-53 212.6 225 55.1
FAN05G5400 Fragaria x ananassa HOM05D001055 ORTHO05D000867 3.9e-53 212.2 224 54.5
FAN05G5610 Fragaria x ananassa HOM05D001055 ORTHO05D000867 3.9e-53 212.2 224 54.0
Nn4g26206 Nelumbo nucifera HOM05D001055 ORTHO05D000867 3.9e-53 212.2 224 56.7
unitig_26.g9978 Utricularia gibba HOM05D001055 ORTHO05D003238 3.9e-53 212.2 222 53.2
FvH4_6g05530 Fragaria vesca HOM05D001055 ORTHO05D000867 5.1e-53 211.8 227 54.2
FAN09G2588 Fragaria x ananassa HOM05D001055 ORTHO05D000867 5.1e-53 211.8 229 53.7
FAN14G5710 Fragaria x ananassa HOM05D001055 ORTHO05D000867 5.1e-53 211.8 227 54.2
FAN14G0326 Fragaria x ananassa HOM05D001055 ORTHO05D000867 6.6e-53 211.5 227 53.7
Cpa.g.sc48.27 Carica papaya HOM05D001055 ORTHO05D000867 1.1e-52 210.7 229 52.8
RcHm_v2.0_Chr3g0454301 Rosa chinensis HOM05D001055 ORTHO05D000867 1.1e-52 210.7 228 53.9
ECA238G4658 Erigeron canadensis HOM05D001055 ORTHO05D000867 1.5e-52 210.3 223 53.4
Eucgr.F04355 Eucalyptus grandis HOM05D001055 ORTHO05D000867 1.9e-52 209.9 221 55.2
TAR362G0089 Trochodendron aralioides HOM05D001055 ORTHO05D000867 5.6e-52 208.4 217 56.2
Rhsim07G0181700 Rhododendron simsii HOM05D001055 ORTHO05D000867 2.1e-51 206.5 225 52.4
MBI17_g29945_MAGBIO Magnolia biondii HOM05D001055 ORTHO05D000867 3.6e-51 205.7 227 53.3
Aqoxy2G03280 Aquilegia oxysepala HOM05D001055 ORTHO05D000867 8.1e-51 204.5 218 54.1
Peaxi162Scf00037g00126 Petunia axillaris HOM05D001055 ORTHO05D000867 8.1e-51 204.5 219 53.4
MSTRG.5109 Avicennia marina HOM05D001055 ORTHO05D000867 1.1e-50 204.1 234 52.6
AUR62000892 Chenopodium quinoa HOM05D001055 ORTHO05D000867 2.3e-50 203.0 217 53.5
EL10Ac4g09332 Beta vulgaris HOM05D001055 ORTHO05D000867 1.5e-49 200.3 220 54.1
PSO302G0049 Papaver somniferum HOM05D001055 ORTHO05D000867 9.9e-49 197.6 229 52.0
Ah.06g189160 Amaranthus hybridus HOM05D001055 ORTHO05D000867 2.2e-48 196.4 216 51.4
CSS0049964 Camellia sinensis var. sinensis HOM05D001055 ORTHO05D000867 1.4e-47 193.7 221 52.0
arahy.Tifrunner.gnm1.ann1.A6CNFB Arachis hypogaea HOM05D001055 ORTHO05D000867 5.4e-47 191.8 161 72.0
Sc09g0003270 Simmondsia chinensis HOM05D001055 ORTHO05D000867 6.0e-46 188.3 229 50.7
Actinidia05714 Actinidia chinensis HOM05D001055 ORTHO05D000867 1.1e-44 184.1 216 50.0
CDE11G0388 Ceratophyllum demersum HOM05D000770 ORTHO05D000586 3.6e-43 179.1 213 47.4
vmacro23129 Vaccinium macrocarpon HOM05D001055 ORTHO05D000867 8.1e-43 177.9 211 50.2
Zm00001eb406420 Zea mays HOM05D001055 ORTHO05D000867 7.8e-38 161.4 224 46.4
HPP92_025587 Vanilla planifolia HOM05D001055 ORTHO05D000867 2.3e-37 159.8 222 45.5
arahy.Tifrunner.gnm1.ann1.N4ELLG Arachis hypogaea HOM05D000288 ORTHO05D000867 3.9e-37 159.1 114 78.9
Lj9A684G47 Lonicera japonica HOM05D001055 ORTHO05D000867 3.9e-37 159.1 178 53.4
SMO119G0232 Selaginella moellendorffii HOM05D001055 ORTHO05D000867 3.1e-34 149.4 234 41.5
AUR62005081 Chenopodium quinoa HOM05D001055 ORTHO05D000867 9.0e-34 147.9 213 45.1
Hma1.2p1_1362F.1_g278240 Hydrangea macrophylla HOM05D001055 ORTHO05D000867 1.3e-27 127.5 141 50.4
Os11g0148000 Oryza sativa ssp. japonica HOM05D001055 ORTHO05D000867 2.1e-22 110.2 120 56.7
Pp3c9_2210 Physcomitrium patens HOM05D001055 ORTHO05D000867 5.1e-21 105.5 192 40.6
arahy.Tifrunner.gnm1.ann1.J37FSV Arachis hypogaea HOM05D001055 ORTHO05D026948 9.0e-18 94.7 65 80.0
Lsat_1_v5_gn_3_61900 Lactuca sativa HOM05D001179 ORTHO05D003685 2.5e-15 86.7 70 65.7
CBR_g45377 Chara braunii HOM05D001055 ORTHO05D000867 5.5e-15 85.5 127 41.7
CSS0024397 Camellia sinensis var. sinensis HOM05D001055 ORTHO05D000867 5.1e-13 79.0 60 56.7
CSS0020087 Camellia sinensis var. sinensis HOM05D001055 ORTHO05D000867 1.8e-10 70.5 59 55.9
CSS0035143 Camellia sinensis var. sinensis HOM05D001055 ORTHO05D000867 1.8e-10 70.5 59 55.9
Prupe.7G014900 Prunus persica HOM05D001055 ORTHO05D000867 2.0e-09 67.0 224 27.7
HanXRQChr05g0152171 Helianthus annuus HOM05D001055 ORTHO05D000867 5.9e-09 65.5 50 70.0
HPP92_006130 Vanilla planifolia HOM05D001055 ORTHO05D000867 7.6e-09 65.1 203 28.1
Potri.019G040200 Populus trichocarpa HOM05D001055 ORTHO05D000867 1.0e-08 64.7 215 29.3
PSO063G0834 Papaver somniferum HOM05D001055 ORTHO05D000867 1.7e-08 63.9 210 26.7
Potri.013G065800 Populus trichocarpa HOM05D001055 ORTHO05D000867 5.0e-08 62.4 217 29.5
MD12G1011500 Malus domestica HOM05D001055 ORTHO05D000867 8.5e-08 61.6 215 27.4
PSO339G2989 Papaver somniferum HOM05D001055 ORTHO05D000867 1.4e-07 60.8 210 25.7
Sabra13G0057500 Salix brachista HOM05D001055 ORTHO05D000867 1.9e-07 60.5 217 28.6
Lj2g0009426 Lotus japonicus HOM05D001055 ORTHO05D000867 9.3e-07 58.2 218 26.1
PGR042G3887 Punica granatum HOM05D001055 ORTHO05D000867 1.2e-06 57.8 116 35.3
RcHm_v2.0_Chr3g0496071 Rosa chinensis HOM05D001055 ORTHO05D000867 1.2e-06 57.8 203 26.6
Rhsim03G0049400 Rhododendron simsii HOM05D001055 ORTHO05D000867 2.7e-06 56.6 148 33.8
Haze_20404 Corylus avellana HOM05D001055 ORTHO05D000867 4.6e-06 55.8 204 26.0
HPP92_025574 Vanilla planifolia HOM05D001055 ORTHO05D000867 4.6e-06 55.8 60 41.7
Manes.08G153000 Manihot esculenta HOM05D001055 ORTHO05D000867 7.9e-06 55.1 217 25.8


User provided reference genes

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