Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.4G5N71 Arachis hypogaea HOM05D006193 ORTHO05D007808 2.4e-66 255.4 129 100.0
arahy.Tifrunner.gnm1.ann1.889ECD Arachis hypogaea HOM05D006193 ORTHO05D007808 1.3e-64 249.6 129 98.4
arahy.Tifrunner.gnm1.ann1.N5AHK9 Arachis hypogaea HOM05D006193 ORTHO05D007808 1.4e-50 203.0 105 97.1
Lalb_Chr01g0009491 Lupinus albus HOM05D006193 ORTHO05D007808 6.5e-48 194.1 128 77.3
arahy.Tifrunner.gnm1.ann1.D81QGL Arachis hypogaea HOM05D006193 ORTHO05D007808 6.1e-46 187.6 105 90.5
Atru.chr12.797 Acer truncatum HOM05D006193 ORTHO05D007808 8.0e-46 187.2 132 72.7
SalBow4G2149 Salvia bowleyana HOM05D006193 ORTHO05D007808 3.0e-45 185.3 127 73.2
Gohir.A06G167900 Gossypium hirsutum HOM05D006193 ORTHO05D007808 4.0e-45 184.9 123 74.0
Gohir.D06G175300 Gossypium hirsutum HOM05D006193 ORTHO05D007808 5.2e-45 184.5 123 73.2
Gorai.010G205700 Gossypium raimondii HOM05D006193 ORTHO05D007808 5.2e-45 184.5 123 73.2
Lj5g0007819 Lotus japonicus HOM05D006193 ORTHO05D007808 6.7e-45 184.1 107 85.0
Migut.D01650 Erythranthe guttata HOM05D006193 ORTHO05D007808 8.8e-45 183.7 133 72.2
Migut.F01979 Erythranthe guttata HOM05D006193 ORTHO05D007808 8.8e-45 183.7 120 77.5
Thecc.10G076000 Theobroma cacao HOM05D006193 ORTHO05D007808 2.0e-44 182.6 119 73.9
Manes.10G047101 Manihot esculenta HOM05D006193 ORTHO05D007808 2.6e-44 182.2 129 72.1
Duzib114G0385 Durio zibethinus HOM05D006193 ORTHO05D007808 3.3e-44 181.8 110 77.3
MSTRG.27474 Avicennia marina HOM05D006193 ORTHO05D007808 5.7e-44 181.0 120 75.8
Cfa001656 Carpinus fangiana HOM05D006193 ORTHO05D007808 7.5e-44 180.6 125 70.4
CSS0007064 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 9.7e-44 180.3 118 75.4
Ciclev10033053m.g Citrus clementina HOM05D006193 ORTHO05D007808 9.7e-44 180.3 126 71.4
CiPaw.02G173400 Carya illinoinensis HOM05D006193 ORTHO05D007808 1.3e-43 179.9 105 80.0
SGA_v2.0_scaffold355G49780 Striga asiatica HOM05D006193 ORTHO05D007808 1.3e-43 179.9 118 73.7
Cfa001990 Carpinus fangiana HOM05D006193 ORTHO05D007808 1.7e-43 179.5 123 69.9
Haze_16878 Corylus avellana HOM05D006193 ORTHO05D007808 1.7e-43 179.5 112 75.9
BcaB04g18121 Brassica carinata HOM05D006193 ORTHO05D007808 2.2e-43 179.1 126 72.2
TPR.G1973 Trifolium pratense HOM05D006193 ORTHO05D007808 2.8e-43 178.7 119 74.8
HanXRQChr01g0023971 Helianthus annuus HOM05D006193 ORTHO05D007808 3.7e-43 178.3 111 75.7
Actinidia38857 Actinidia chinensis HOM05D006193 ORTHO05D007808 1.1e-42 176.8 128 68.8
VMungo0720G0734 Vigna mungo HOM05D006193 ORTHO05D007808 1.1e-42 176.8 100 85.0
COL.COLO4_28414 Corchorus olitorius HOM05D006193 ORTHO05D007808 1.4e-42 176.4 110 76.4
TAR623G1160 Trochodendron aralioides HOM05D006193 ORTHO05D007808 1.4e-42 176.4 127 68.5
Lsat_1_v5_gn_1_77620 Lactuca sativa HOM05D006193 ORTHO05D007808 1.8e-42 176.0 131 66.4
Prupe.2G212200 Prunus persica HOM05D006193 ORTHO05D007808 1.8e-42 176.0 107 74.8
CAN.G108.21 Capsicum annuum HOM05D006193 ORTHO05D007808 2.4e-42 175.6 129 68.2
HanXRQChr08g0229761 Helianthus annuus HOM05D006193 ORTHO05D007808 2.4e-42 175.6 122 71.3
Sopen03g003450 Solanum pennellii HOM05D006193 ORTHO05D007808 3.1e-42 175.3 132 68.9
PGSC0003DMG400009070 Solanum tuberosum HOM05D006193 ORTHO05D007808 3.1e-42 175.3 122 73.0
PSO210G4078 Papaver somniferum HOM05D006193 ORTHO05D007808 4.1e-42 174.9 114 73.7
Solyc03g007490.3 Solanum lycopersicum HOM05D006193 ORTHO05D007808 4.1e-42 174.9 132 68.9
PSO832G3015 Papaver somniferum HOM05D006193 ORTHO05D007808 5.3e-42 174.5 114 72.8
AL7G42250 Arabidopsis lyrata HOM05D006193 ORTHO05D007808 7.0e-42 174.1 132 68.2
Glyma.10G210100 Glycine max HOM05D006193 ORTHO05D007808 7.0e-42 174.1 100 82.0
ECA248G2014 Erigeron canadensis HOM05D006193 ORTHO05D007808 9.1e-42 173.7 129 68.2
THA.LOC104808680 Tarenaya hassleriana HOM05D006193 ORTHO05D007808 1.2e-41 173.3 128 68.0
Eucgr.J01081 Eucalyptus grandis HOM05D006193 ORTHO05D007808 1.6e-41 172.9 119 69.7
Phvul.007G095900 Phaseolus vulgaris HOM05D006193 ORTHO05D007808 1.6e-41 172.9 122 73.0
Sed0026653 Sechium edule HOM05D006193 ORTHO05D007808 1.6e-41 172.9 107 75.7
Sp7g11980 Schrenkiella parvula HOM05D006193 ORTHO05D007808 2.0e-41 172.6 131 68.7
TWI63G1140 Tripterygium wilfordii HOM05D006193 ORTHO05D007808 2.7e-41 172.2 114 73.7
TAR369G0988 Trochodendron aralioides HOM05D006193 ORTHO05D007808 2.7e-41 172.2 112 73.2
PGR044G2737 Punica granatum HOM05D006193 ORTHO05D007808 3.5e-41 171.8 129 66.7
AT4G14145 Arabidopsis thaliana HOM05D006193 ORTHO05D007808 4.5e-41 171.4 123 70.7
Peaxi162Scf00370g00117 Petunia axillaris HOM05D006193 ORTHO05D007808 4.5e-41 171.4 132 67.4
Glyma.20G180500 Glycine max HOM05D006193 ORTHO05D007808 5.9e-41 171.0 100 81.0
Peaxi162Scf00011g01839 Petunia axillaris HOM05D006193 ORTHO05D007808 7.7e-41 170.6 134 67.9
Carub.0007s2828 Capsella rubella HOM05D006193 ORTHO05D007808 1.0e-40 170.2 123 69.1
Nitab4.5_0006507g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 1.0e-40 170.2 127 69.3
QL08p055470 Quercus lobata HOM05D006193 ORTHO05D007808 1.0e-40 170.2 125 68.0
BcaC07g37722 Brassica carinata HOM05D006193 ORTHO05D007808 1.3e-40 169.9 128 68.8
A08p10360 Brassica napus HOM05D006193 ORTHO05D007808 1.3e-40 169.9 128 68.8
BolC8t48104H Brassica oleracea HOM05D006193 ORTHO05D007808 1.3e-40 169.9 128 68.8
BraA08t33036Z Brassica rapa HOM05D006193 ORTHO05D007808 1.3e-40 169.9 128 68.8
MD01G1107500 Malus domestica HOM05D006193 ORTHO05D007808 1.7e-40 169.5 104 76.0
Nitab4.5_0000071g0090 Nicotiana tabacum HOM05D006193 ORTHO05D007808 2.9e-40 168.7 119 72.3
Nn2g10831 Nelumbo nucifera HOM05D006193 ORTHO05D007808 3.8e-40 168.3 127 70.1
Sed0026413 Sechium edule HOM05D006193 ORTHO05D007808 5.0e-40 167.9 128 65.6
SGA_v2.0_scaffold24G10658 Striga asiatica HOM05D006193 ORTHO05D007808 5.0e-40 167.9 108 75.9
CARHR220160 Cardamine hirsuta HOM05D006193 ORTHO05D007808 6.5e-40 167.5 135 66.7
Cc02_g11260 Coffea canephora HOM05D006193 ORTHO05D007808 6.5e-40 167.5 111 75.7
Duzib128G0799 Durio zibethinus HOM05D006193 ORTHO05D007808 6.5e-40 167.5 123 67.5
FvH4_7g19210 Fragaria vesca HOM05D006193 ORTHO05D007808 6.5e-40 167.5 101 76.2
unitig_37.g12308 Utricularia gibba HOM05D006193 ORTHO05D007808 6.5e-40 167.5 105 78.1
Aa31LG9G3240 Aethionema arabicum HOM05D006193 ORTHO05D007808 8.5e-40 167.2 119 72.3
GSVIVG01016260001 Vitis vinifera HOM05D006193 ORTHO05D007808 1.1e-39 166.8 117 67.5
DCAR_016552 Daucus carota HOM05D006193 ORTHO05D007808 1.5e-39 166.4 108 72.2
RcHm_v2.0_Chr1g0363061 Rosa chinensis HOM05D006193 ORTHO05D007808 1.5e-39 166.4 109 71.6
Thhalv10026557m.g Eutrema salsugineum HOM05D006193 ORTHO05D007808 2.5e-39 165.6 128 67.2
BcaC01g00219 Brassica carinata HOM05D006193 ORTHO05D007808 5.5e-39 164.5 101 78.2
Oeu042739.1 Olea europaea HOM05D006193 ORTHO05D007808 7.2e-39 164.1 138 63.0
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.2e-38 163.3 101 74.3
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 1.2e-38 163.3 101 74.3
Oeu014384.2 Olea europaea HOM05D006193 ORTHO05D007808 4.7e-38 161.4 160 56.9
A08p24240 Brassica napus HOM05D006193 ORTHO05D007808 8.0e-38 160.6 107 73.8
MBI07_g44648_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 8.0e-38 160.6 128 65.6
Potri.010G223700 Populus trichocarpa HOM05D006193 ORTHO05D007808 2.3e-37 159.1 128 62.5
ATR0329G030 Amborella trichopoda HOM05D006193 ORTHO05D007808 4.0e-37 158.3 127 61.4
SGA_v2.0_scaffold250G44987 Striga asiatica HOM05D006193 ORTHO05D007808 4.0e-37 158.3 129 62.0
BraA08t34379Z Brassica rapa HOM05D006193 ORTHO05D007808 5.2e-37 157.9 106 73.6
CANSAT54G0886 Cannabis sativa HOM05D006193 ORTHO05D007808 1.5e-36 156.4 127 65.4
Aqoxy1G03645 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 2.0e-36 156.0 112 66.1
ClCG05G021080 Citrullus lanatus HOM05D006193 ORTHO05D007808 2.0e-36 156.0 146 58.2
CiPaw.16G031600 Carya illinoinensis HOM05D006193 ORTHO05D007808 2.6e-36 155.6 101 75.2
Hund05693 Selenicereus undatus HOM05D006193 ORTHO05D007808 2.2e-35 152.5 123 63.4
HPP92_011207 Vanilla planifolia HOM05D006193 ORTHO05D007808 3.7e-35 151.8 105 67.6
Os03g0288400 Oryza sativa ssp. japonica HOM05D006193 ORTHO05D007808 4.8e-35 151.4 127 60.6
Sc20g0001780 Simmondsia chinensis HOM05D006193 ORTHO05D007808 4.8e-35 151.4 128 60.2
MELO3C012421.2 Cucumis melo HOM05D006193 ORTHO05D007808 1.4e-34 149.8 160 50.6
FAN03G1544 Fragaria x ananassa HOM05D006193 ORTHO05D007808 1.4e-34 149.8 96 71.9
Zm00001eb062340 Zea mays HOM05D006193 ORTHO05D007808 4.1e-34 148.3 127 59.1
Rhsim03G0119300 Rhododendron simsii HOM05D006193 ORTHO05D007808 1.6e-33 146.4 202 46.0
CDE03G0070 Ceratophyllum demersum HOM05D006193 ORTHO05D007808 7.7e-33 144.1 110 60.0
Psat6g182760 Pisum sativum HOM05D006193 ORTHO05D007808 1.7e-32 142.9 96 74.0
Ca_10561_v3 Cicer arietinum L. HOM05D006193 ORTHO05D007808 3.8e-32 141.7 84 83.3
Aqoxy1G03181 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 5.0e-32 141.4 103 65.0
Sabra10G0173000 Salix brachista HOM05D006193 ORTHO05D007808 1.5e-31 139.8 167 47.3
EL10Ac7g18239 Beta vulgaris HOM05D006193 ORTHO05D007808 1.8e-29 132.9 121 57.9
Ah.08g217480 Amaranthus hybridus HOM05D006193 ORTHO05D007808 9.8e-28 127.1 115 56.5
AUR62001381 Chenopodium quinoa HOM05D006193 ORTHO05D007808 2.2e-27 125.9 88 71.6
Mapoly0038s0090 Marchantia polymorpha HOM05D006193 ORTHO05D007808 1.3e-24 116.7 104 52.9
FAN19G2294 Fragaria x ananassa HOM05D006193 ORTHO05D007808 3.8e-24 115.2 84 67.9
vmacro07063 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 8.6e-24 114.0 65 83.1
Medtr1g094840 Medicago truncatula HOM05D006193 ORTHO05D007808 1.1e-23 113.6 71 76.1
CsaV3_5G036210 Cucumis sativus L. HOM05D006193 ORTHO05D007808 3.6e-22 108.6 64 78.1
MBI07_g30981_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 1.2e-20 103.6 103 52.4
BolC3t19959H Brassica oleracea HOM05D006193 ORTHO05D007808 4.4e-20 101.7 60 80.0
AagrBONN_evm.TU.Sc2ySwM_228.264 Anthoceros agrestis HOM05D006193 ORTHO05D007808 3.7e-19 98.6 104 49.0
FAN06G3393 Fragaria x ananassa HOM05D006193 ORTHO05D007808 4.9e-19 98.2 65 67.7
Pp3c5_20880 Physcomitrium patens HOM05D006193 ORTHO05D007808 7.0e-18 94.4 103 46.6
Lsat_1_v5_gn_2_8120 Lactuca sativa HOM05D006193 ORTHO05D007808 1.3e-16 90.1 84 54.8
EL10Ac7g17093 Beta vulgaris HOM05D006193 ORTHO05D007808 1.5e-15 86.7 65 64.6
Nitab4.5_0005501g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 1.4e-13 80.1 111 46.8
SMO232G0066 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 1.8e-13 79.7 98 35.7
Potri.008G038500 Populus trichocarpa HOM05D006193 ORTHO05D007808 9.8e-12 73.9 57 63.2
vmacro07064 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 1.7e-11 73.2 65 63.1
SMO241G0021 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 2.9e-11 72.4 90 33.3


User provided reference genes

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