Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 1.0e-53 214.2 212 100.0
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 1.8e-50 203.4 224 83.0
TPR.G22164 Trifolium pratense HOM05D002879 ORTHO05D002930 4.1e-23 112.5 260 61.2
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 2.2e-21 106.7 96 86.5
Medtr1g098680 Medicago truncatula HOM05D002879 ORTHO05D002930 7.2e-20 101.7 256 64.5
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 1.2e-19 100.9 96 85.4
Lj5g0010855 Lotus japonicus HOM05D002879 ORTHO05D002930 1.8e-18 97.1 204 60.8
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 3.0e-18 96.3 93 76.3
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 6.8e-18 95.1 89 59.6
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 4.4e-17 92.4 106 71.7
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 5.7e-17 92.0 89 61.8
Ciclev10002644m.g Citrus clementina HOM05D002879 ORTHO05D002930 9.8e-17 91.3 94 80.9
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 1.3e-16 90.9 93 62.4
CAN.G264.3 Capsicum annuum HOM05D002879 ORTHO05D002930 1.8e-15 87.0 57 75.4
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.8e-15 87.0 100 69.0
arahy.Tifrunner.gnm1.ann1.HS8YG8 Arachis hypogaea HOM05D002879 ORTHO05D002930 4.1e-15 85.9 92 68.5
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 5.4e-15 85.5 56 75.0
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 7.0e-15 85.1 88 70.5
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 2.7e-14 83.2 95 64.2
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 2.7e-14 83.2 92 68.5
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 4.5e-14 82.4 92 67.4
Sc02g0003910 Simmondsia chinensis HOM05D002879 ORTHO05D002930 5.9e-14 82.0 210 54.3
TWI34G0242 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 7.7e-14 81.6 44 88.6
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 1.0e-13 81.3 55 70.9
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 1.0e-13 81.3 55 70.9
Nitab4.5_0001187g0070 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.3e-13 80.9 48 79.2
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 1.7e-13 80.5 222 51.8
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.7e-13 80.5 92 60.9
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 2.9e-13 79.7 92 57.6
Nitab4.5_0002764g0050 Nicotiana tabacum HOM05D002879 ORTHO05D002930 3.8e-13 79.3 47 78.7
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 5.0e-13 79.0 56 73.2
SEGI_08871 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 6.6e-13 78.6 54 75.9
SEGI_40905 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 6.6e-13 78.6 46 82.6
TPR.G31183 Trifolium pratense HOM05D002879 ORTHO05D002930 6.6e-13 78.6 93 61.3
Potri.005G193800 Populus trichocarpa HOM05D002879 ORTHO05D002930 1.1e-12 77.8 51 68.6
SEGI_09931 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.5e-12 77.4 57 70.2
Ciclev10002749m.g Citrus clementina HOM05D002879 ORTHO05D002930 2.5e-12 76.6 104 71.2
Potri.005G193901 Populus trichocarpa HOM05D002879 ORTHO05D002930 2.5e-12 76.6 56 64.3
PGSC0003DMG400006662 Solanum tuberosum HOM05D002879 ORTHO05D002930 2.5e-12 76.6 52 69.2
HPP92_009298 Vanilla planifolia HOM05D002879 ORTHO05D002930 2.5e-12 76.6 87 71.3
Ciclev10002747m.g Citrus clementina HOM05D002879 ORTHO05D002930 3.3e-12 76.3 104 63.5
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 3.3e-12 76.3 92 58.7
CAN.G264.2 Capsicum annuum HOM05D002879 ORTHO05D002930 4.3e-12 75.9 52 69.2
Rhsim11G0084200 Rhododendron simsii HOM05D002879 ORTHO05D002930 4.3e-12 75.9 92 67.4
Ca_23081_v3 Cicer arietinum L. HOM05D002879 ORTHO05D002930 5.6e-12 75.5 94 71.3
Duzib116G0596 Durio zibethinus HOM05D002879 ORTHO05D002930 5.6e-12 75.5 103 53.4
GSVIVG01034550001 Vitis vinifera HOM05D002879 ORTHO05D002930 5.6e-12 75.5 84 77.4
Aqoxy5G02058 Aquilegia oxysepala HOM05D002879 ORTHO05D002930 7.3e-12 75.1 49 69.4
Sc26g0002530 Simmondsia chinensis HOM05D002879 ORTHO05D002930 7.3e-12 75.1 48 70.8
vmacro02690 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 7.3e-12 75.1 95 72.6
Prupe.8G034100 Prunus persica HOM05D002879 ORTHO05D002930 9.5e-12 74.7 210 57.6
Sc26g0002520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 9.5e-12 74.7 48 70.8
PGSC0003DMG400024093 Solanum tuberosum HOM05D002879 ORTHO05D002930 9.5e-12 74.7 48 72.9
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 9.5e-12 74.7 91 53.8
Actinidia17783 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.6e-11 73.9 53 64.2
CSS0043717 Camellia sinensis var. sinensis HOM05D002879 ORTHO05D002930 1.6e-11 73.9 95 64.2
vmacro12406 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.6e-11 73.9 71 57.7
Haze_17769 Corylus avellana HOM05D002879 ORTHO05D002930 2.1e-11 73.6 92 59.8
Oeu046047.1 Olea europaea HOM05D002879 ORTHO05D002930 2.1e-11 73.6 86 69.8
Hund26690 Selenicereus undatus HOM05D002879 ORTHO05D002930 2.1e-11 73.6 52 69.2
PGSC0003DMG400006661 Solanum tuberosum HOM05D002879 ORTHO05D002930 2.1e-11 73.6 114 58.8
CAN.G264.1 Capsicum annuum HOM05D002879 ORTHO05D002930 2.8e-11 73.2 54 64.8
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 2.8e-11 73.2 50 68.0
Sopen04g027560 Solanum pennellii HOM05D002879 ORTHO05D002930 3.6e-11 72.8 54 68.5
Actinidia29536 Actinidia chinensis HOM05D002879 ORTHO05D002930 4.7e-11 72.4 43 76.7
Eucgr.F04219 Eucalyptus grandis HOM05D002879 ORTHO05D002930 6.1e-11 72.0 92 68.5
Solyc04g071590.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 8.0e-11 71.6 48 68.8
Sopen04g027570 Solanum pennellii HOM05D002879 ORTHO05D002930 8.0e-11 71.6 48 68.8
EL10Ac1g01570 Beta vulgaris HOM05D002879 ORTHO05D002930 1.0e-10 71.2 60 61.7
EL10Ac1g01576 Beta vulgaris HOM05D002879 ORTHO05D002930 1.4e-10 70.9 54 64.8
Eucgr.E02063 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.4e-10 70.9 53 67.9
vmacro01468 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.4e-10 70.9 51 64.7
arahy.Tifrunner.gnm1.ann1.4FY7U3 Arachis hypogaea HOM05D002879 ORTHO05D002930 1.8e-10 70.5 90 65.6
AUR62026685 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.8e-10 70.5 53 67.9
AUR62040595 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.8e-10 70.5 44 72.7
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 1.8e-10 70.5 89 66.3
Migut.C00982 Erythranthe guttata HOM05D002879 ORTHO05D002930 2.3e-10 70.1 49 65.3
Dinv41066 Davidia involucrata HOM05D002879 ORTHO05D002930 3.0e-10 69.7 91 60.4
Migut.N01983 Erythranthe guttata HOM05D002879 ORTHO05D002930 3.0e-10 69.7 52 65.4
Rhsim11G0085000 Rhododendron simsii HOM05D002879 ORTHO05D002930 3.0e-10 69.7 44 75.0
vmacro23421 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 3.0e-10 69.7 44 72.7
Actinidia04759 Actinidia chinensis HOM05D002879 ORTHO05D002930 5.2e-10 68.9 45 73.3
Migut.I00192 Erythranthe guttata HOM05D002879 ORTHO05D002930 5.2e-10 68.9 47 68.1
Psat1g101880 Pisum sativum HOM05D002879 ORTHO05D002930 5.2e-10 68.9 52 65.4
Rhsim11G0084500 Rhododendron simsii HOM05D002879 ORTHO05D002930 6.8e-10 68.6 50 64.0
Lj2g0004069 Lotus japonicus HOM05D002879 ORTHO05D002930 8.9e-10 68.2 98 62.2
Sed0017062 Sechium edule HOM05D002879 ORTHO05D002930 8.9e-10 68.2 64 54.7
Ah.05g168050 Amaranthus hybridus HOM05D002879 ORTHO05D002930 1.2e-09 67.8 44 70.5
Eucgr.E02058 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.0e-09 67.0 89 60.7
Os02g0543000 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 2.0e-09 67.0 45 73.3
vmacro02689 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.0e-09 67.0 47 68.1
COL.COLO4_29859 Corchorus olitorius HOM05D002879 ORTHO05D002930 2.6e-09 66.6 104 58.7
Nitab4.5_0001187g0080 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.6e-09 66.6 88 76.1
vmacro01469 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 3.4e-09 66.2 92 69.6
Ah.05g168060 Amaranthus hybridus HOM05D002879 ORTHO05D002930 4.4e-09 65.9 48 64.6
Cpa.g.sc21.214 Carica papaya HOM05D002879 ORTHO05D002930 4.4e-09 65.9 94 60.6
Lsat_1_v5_gn_9_41200 Lactuca sativa HOM05D002879 ORTHO05D002930 4.4e-09 65.9 43 74.4
Manes.02G180800 Manihot esculenta HOM05D002879 ORTHO05D002930 4.4e-09 65.9 50 64.0
Migut.N02014 Erythranthe guttata HOM05D002879 ORTHO05D002930 5.7e-09 65.5 45 68.9
MD05G1028100 Malus domestica HOM05D002879 ORTHO05D002930 5.7e-09 65.5 171 65.5
AUR62026684 Chenopodium quinoa HOM05D002879 ORTHO05D002930 9.8e-09 64.7 47 63.8
Eucgr.E02068 Eucalyptus grandis HOM05D002879 ORTHO05D002930 9.8e-09 64.7 53 64.2
MD10G1029000 Malus domestica HOM05D002879 ORTHO05D002930 9.8e-09 64.7 53 60.4
Hund17173 Selenicereus undatus HOM05D002879 ORTHO05D002930 9.8e-09 64.7 57 61.4
EL10Ac1g01577 Beta vulgaris HOM05D002879 ORTHO05D002930 1.3e-08 64.3 47 61.7
Eucgr.D00723 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.3e-08 64.3 92 69.6
Migut.C00983 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.7e-08 63.9 43 72.1
Medtr0583s0010 Medicago truncatula HOM05D002879 ORTHO05D002930 1.7e-08 63.9 52 65.4
Rhsim11G0084400 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.7e-08 63.9 44 70.5
FAN24G2761 Fragaria x ananassa HOM05D002879 ORTHO05D002930 2.2e-08 63.5 222 48.6
Rhsim11G0084300 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.2e-08 63.5 44 68.2
Rhsim11G0085100 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.2e-08 63.5 48 62.5
Zm00001eb263060 Zea mays HOM05D002879 ORTHO05D002930 3.7e-08 62.8 52 69.2
AUR62026686 Chenopodium quinoa HOM05D002879 ORTHO05D002930 4.9e-08 62.4 58 58.6
Solyc04g071600.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 4.9e-08 62.4 53 58.5
PGSC0003DMG400006663 Solanum tuberosum HOM05D002879 ORTHO05D002930 4.9e-08 62.4 53 58.5
CiPaw.16G010900 Carya illinoinensis HOM05D002879 ORTHO05D002930 6.4e-08 62.0 92 60.9
Eucgr.E02071 Eucalyptus grandis HOM05D002879 ORTHO05D002930 6.4e-08 62.0 53 60.4
Rhsim11G0084700 Rhododendron simsii HOM05D002879 ORTHO05D002930 6.4e-08 62.0 44 65.9
vmacro01464 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 6.4e-08 62.0 91 60.4
vmacro23419 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 6.4e-08 62.0 91 60.4
Zm00001eb362480 Zea mays HOM05D002879 ORTHO05D002930 6.4e-08 62.0 50 62.0
arahy.Tifrunner.gnm1.ann1.BF4CMP Arachis hypogaea HOM05D002879 ORTHO05D002930 8.3e-08 61.6 51 62.7
Migut.N01982 Erythranthe guttata HOM05D002879 ORTHO05D002930 8.3e-08 61.6 44 65.9
Migut.N02015 Erythranthe guttata HOM05D002879 ORTHO05D002930 8.3e-08 61.6 44 65.9
vmacro02691 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 8.3e-08 61.6 58 55.2
Ca_12311_v3 Cicer arietinum L. HOM05D002879 ORTHO05D002930 1.1e-07 61.2 93 62.4
Rhsim11G0084100 Rhododendron simsii HOM05D000132 ORTHO05D000058 1.1e-07 61.2 48 60.4
CiPaw.15G015000 Carya illinoinensis HOM05D002879 ORTHO05D002930 1.4e-07 60.8 98 60.2
Os01g0963600 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 1.8e-07 60.5 46 60.9
SMO351G0439 Selaginella moellendorffii HOM05D002879 ORTHO05D002930 2.4e-07 60.1 48 64.6
MELO3C025026.2 Cucumis melo HOM05D002879 ORTHO05D002930 3.2e-07 59.7 89 48.3
Sc26g0003520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 4.1e-07 59.3 43 67.4
Zm00001eb091920 Zea mays HOM05D002879 ORTHO05D002930 4.1e-07 59.3 79 75.9
Rhsim11G0084800 Rhododendron simsii HOM05D002879 ORTHO05D002930 5.4e-07 58.9 50 58.0
Eucgr.E02064 Eucalyptus grandis HOM05D002879 ORTHO05D002930 7.0e-07 58.5 53 58.5
Eucgr.E02069 Eucalyptus grandis HOM05D002879 ORTHO05D002930 7.0e-07 58.5 53 58.5
Rhsim13G0037600 Rhododendron simsii HOM05D002879 ORTHO05D002930 7.0e-07 58.5 52 61.5
AUR62040599 Chenopodium quinoa HOM05D002879 ORTHO05D002930 9.2e-07 58.2 65 53.8
Hund26910 Selenicereus undatus HOM05D002879 ORTHO05D002930 9.2e-07 58.2 49 63.3
Sc26g0002500 Simmondsia chinensis HOM05D002879 ORTHO05D002930 9.2e-07 58.2 51 62.7
Glyma.16G166600 Glycine max HOM05D002879 ORTHO05D002930 1.2e-06 57.8 92 58.7
Manes.02G181000 Manihot esculenta HOM05D002879 ORTHO05D002930 1.2e-06 57.8 54 55.6
Eucgr.L02884 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.6e-06 57.4 53 56.6
QL02p029925 Quercus lobata HOM05D002879 ORTHO05D002930 1.6e-06 57.4 63 73.0
Rhsim11G0084600 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.6e-06 57.4 50 56.0
Sopen04g027580 Solanum pennellii HOM05D002879 ORTHO05D002930 1.6e-06 57.4 51 56.9
unitig_747.g21665 Utricularia gibba HOM05D002879 ORTHO05D002930 1.6e-06 57.4 44 61.4
Eucgr.E02065 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.0e-06 57.0 53 56.6
Eucgr.E02070 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.7e-06 56.6 53 56.6
Oeu046050.1 Olea europaea HOM05D002879 ORTHO05D002930 2.7e-06 56.6 74 71.6
Os11g0167800 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 2.7e-06 56.6 95 66.3
Phvul.004G094600 Phaseolus vulgaris HOM05D002879 ORTHO05D002930 2.7e-06 56.6 92 67.4
Os01g0959100 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 4.6e-06 55.8 40 60.0
Sc26g0002490 Simmondsia chinensis HOM05D002879 ORTHO05D002930 4.6e-06 55.8 61 52.5
Zm00001eb083180 Zea mays HOM05D002879 ORTHO05D002930 4.6e-06 55.8 82 53.7
Dinv25878 Davidia involucrata HOM05D002879 ORTHO05D002930 5.9e-06 55.5 108 55.6
Eucgr.E02066 Eucalyptus grandis HOM05D002879 ORTHO05D002930 5.9e-06 55.5 53 54.7
SEGI_23588 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 5.9e-06 55.5 69 49.3
CAN.G264.4 Capsicum annuum HOM05D002879 ORTHO05D002930 7.8e-06 55.1 88 55.7
MBI09_g20569_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 7.8e-06 55.1 89 60.7
MBI09_g23867_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 7.8e-06 55.1 89 60.7


User provided reference genes

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