Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.4CX26M Arachis hypogaea HOM05D000816 ORTHO05D084344 2.3e-14 81.6 37 100.0
arahy.Tifrunner.gnm1.ann1.10U64H Arachis hypogaea HOM05D000816 ORTHO05D005265 5.6e-13 77.0 37 94.6
arahy.Tifrunner.gnm1.ann1.5B6C8S Arachis hypogaea HOM05D000816 ORTHO05D082878 5.6e-13 77.0 37 94.6
arahy.Tifrunner.gnm1.ann1.9QU84Y Arachis hypogaea HOM05D000816 ORTHO05D084696 7.3e-13 76.6 37 91.9
arahy.Tifrunner.gnm1.ann1.DS2WG6 Arachis hypogaea HOM05D000001 ORTHO05D009373 1.4e-11 72.4 40 87.5
arahy.Tifrunner.gnm1.ann1.SM2P8D Arachis hypogaea HOM05D000001 ORTHO05D018420 1.8e-11 72.0 37 86.5
arahy.Tifrunner.gnm1.ann1.2ES05R Arachis hypogaea HOM05D000173 ORTHO05D000106 5.2e-11 70.5 41 80.5
arahy.Tifrunner.gnm1.ann1.TK9G7V Arachis hypogaea HOM05D000001 ORTHO05D010702 1.5e-10 68.9 37 86.5
arahy.Tifrunner.gnm1.ann1.MZB5SE Arachis hypogaea HOM05D000816 ORTHO05D085049 4.4e-10 67.4 36 86.1
arahy.Tifrunner.gnm1.ann1.D1XR3E Arachis hypogaea HOM05D000001 ORTHO05D009373 5.8e-10 67.0 31 93.5
arahy.Tifrunner.gnm1.ann1.Q4N9S1 Arachis hypogaea HOM05D000001 ORTHO05D009373 5.8e-10 67.0 31 93.5
arahy.Tifrunner.gnm1.ann1.ULF2Q7 Arachis hypogaea HOM05D001600 ORTHO05D001502 1.9e-08 62.0 32 87.5
Lj1g0021128 Lotus japonicus HOM05D000001 ORTHO05D009373 7.1e-08 60.1 41 70.7
TPR.G23357 Trifolium pratense HOM05D002319 ORTHO05D002374 1.2e-07 59.3 41 65.9
Lalb_Chr24g0400651 Lupinus albus HOM05D000001 ORTHO05D010702 2.7e-07 58.2 40 65.0
arahy.Tifrunner.gnm1.ann1.SCIL2E Arachis hypogaea HOM05D000816 ORTHO05D005265 3.5e-07 57.8 28 89.3
Atru.chr8.1428 Acer truncatum HOM05D000001 ORTHO05D009373 4.6e-07 57.4 41 68.3
AagrBONN_evm.TU.Sc2ySwM_228.5860 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.0e-07 57.0 31 74.2
AagrBONN_evm.TU.Sc2ySwM_368.76 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.0e-06 56.2 41 61.0
Glyma.03G184300 Glycine max HOM05D000001 ORTHO05D009373 1.0e-06 56.2 31 71.0
AagrBONN_evm.TU.Sc2ySwM_228.2750 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.3e-06 55.8 41 58.5
Medtr7g105440 Medicago truncatula HOM05D000001 ORTHO05D009373 1.3e-06 55.8 31 74.2
AagrBONN_evm.TU.Sc2ySwM_344.116 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.7e-06 55.5 41 56.1
Dinv18077 Davidia involucrata HOM05D000001 ORTHO05D009340 1.7e-06 55.5 31 74.2
AagrBONN_evm.TU.Sc2ySwM_228.2894 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.3e-06 55.1 41 58.5
AagrBONN_evm.TU.Sc2ySwM_228.3650 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.3e-06 55.1 41 61.0
AagrBONN_evm.TU.Sc2ySwM_344.1977 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.3e-06 55.1 41 61.0
AagrBONN_evm.TU.Sc2ySwM_344.5643 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.3e-06 55.1 41 58.5
Aqoxy2G01570 Aquilegia oxysepala HOM05D000001 ORTHO05D018420 2.3e-06 55.1 40 65.0
AagrBONN_evm.TU.Sc2ySwM_117.1341 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.0e-06 54.7 41 58.5
AagrBONN_evm.TU.Sc2ySwM_117.3489 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.0e-06 54.7 41 58.5
AagrBONN_evm.TU.Sc2ySwM_228.5856 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.0e-06 54.7 41 58.5
AagrBONN_evm.TU.Sc2ySwM_344.3500 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.0e-06 54.7 31 74.2
AagrBONN_evm.TU.Sc2ySwM_344.5479 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.0e-06 54.7 29 75.9
AagrBONN_evm.TU.Sc2ySwM_362.40 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.0e-06 54.7 41 58.5
AagrBONN_evm.TU.Sc2ySwM_362.76 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.0e-06 54.7 31 71.0
AagrBONN_evm.TU.Sc2ySwM_228.324 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.9e-06 54.3 41 56.1
AagrBONN_evm.TU.Sc2ySwM_344.2621 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.9e-06 54.3 41 56.1
AagrBONN_evm.TU.Sc2ySwM_344.5624 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.9e-06 54.3 41 56.1
AagrBONN_evm.TU.Sc2ySwM_368.107 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.9e-06 54.3 41 56.1
AagrBONN_evm.TU.Sc2ySwM_368.110 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.9e-06 54.3 41 56.1
AagrBONN_evm.TU.Sc2ySwM_368.59 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.9e-06 54.3 39 61.5
AagrBONN_evm.TU.Sc2ySwM_199.28 Anthoceros agrestis HOM05D000001 ORTHO05D000003 5.1e-06 53.9 39 61.5
AagrBONN_evm.TU.Sc2ySwM_228.1099 Anthoceros agrestis HOM05D000001 ORTHO05D000003 5.1e-06 53.9 39 61.5
AagrBONN_evm.TU.Sc2ySwM_228.1117 Anthoceros agrestis HOM05D000001 ORTHO05D000003 5.1e-06 53.9 39 61.5
AagrBONN_evm.TU.Sc2ySwM_340.562 Anthoceros agrestis HOM05D000001 ORTHO05D000003 5.1e-06 53.9 39 59.0
AagrBONN_evm.TU.Sc2ySwM_344.3286 Anthoceros agrestis HOM05D000001 ORTHO05D000003 5.1e-06 53.9 41 56.1
AagrBONN_evm.TU.Sc2ySwM_344.3820 Anthoceros agrestis HOM05D000001 ORTHO05D000003 5.1e-06 53.9 41 58.5
AagrBONN_evm.TU.Sc2ySwM_344.5640 Anthoceros agrestis HOM05D000001 ORTHO05D000003 5.1e-06 53.9 31 74.2
AagrBONN_evm.TU.Sc2ySwM_368.3261 Anthoceros agrestis HOM05D000001 ORTHO05D000003 5.1e-06 53.9 39 61.5
AagrBONN_evm.TU.Sc2ySwM_369.30 Anthoceros agrestis HOM05D000001 ORTHO05D000003 5.1e-06 53.9 39 59.0
AL7G35760 Arabidopsis lyrata HOM05D000001 ORTHO05D000003 5.1e-06 53.9 32 68.8
AT4G18520 Arabidopsis thaliana HOM05D000001 ORTHO05D000003 5.1e-06 53.9 32 68.8
BcaC06g30577 Brassica carinata HOM05D000001 ORTHO05D000003 5.1e-06 53.9 32 68.8
A03p51370 Brassica napus HOM05D000001 ORTHO05D000003 5.1e-06 53.9 32 68.8
Carub.0007s2271 Capsella rubella HOM05D000001 ORTHO05D000003 5.1e-06 53.9 32 68.8
Phvul.001G179800 Phaseolus vulgaris HOM05D000001 ORTHO05D009373 5.1e-06 53.9 41 58.5
Sc16g0003860 Simmondsia chinensis HOM05D000001 ORTHO05D009083 5.1e-06 53.9 31 74.2
AagrBONN_evm.TU.Sc2ySwM_117.2529 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.6e-06 53.5 41 56.1
AagrBONN_evm.TU.Sc2ySwM_228.1335__1336 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.6e-06 53.5 39 61.5
AagrBONN_evm.TU.Sc2ySwM_228.4406 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.6e-06 53.5 34 61.8
AagrBONN_evm.TU.Sc2ySwM_228.5874 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.6e-06 53.5 41 58.5
AagrBONN_evm.TU.Sc2ySwM_340.528 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.6e-06 53.5 41 58.5
AagrBONN_evm.TU.Sc2ySwM_344.428 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.6e-06 53.5 31 71.0
AagrBONN_evm.TU.Sc2ySwM_344.5118 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.6e-06 53.5 41 53.7
AagrBONN_evm.TU.Sc2ySwM_344.62 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.6e-06 53.5 41 58.5
AagrBONN_evm.TU.Sc2ySwM_362.92 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.6e-06 53.5 41 56.1
AagrBONN_evm.TU.Sc2ySwM_368.2333 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.6e-06 53.5 41 56.1
AagrBONN_evm.TU.Sc2ySwM_368.3439 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.6e-06 53.5 41 58.5
AagrBONN_evm.TU.Sc2ySwM_368.674 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.6e-06 53.5 41 58.5
CSS0029530 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D000003 6.6e-06 53.5 41 63.4
CSS0033007 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D000003 6.6e-06 53.5 41 63.4
Medtr7g105540 Medicago truncatula HOM05D000001 ORTHO05D009373 6.6e-06 53.5 40 60.0
Nn1g02216 Nelumbo nucifera HOM05D000001 ORTHO05D009837 6.6e-06 53.5 31 71.0
AagrBONN_evm.TU.Sc2ySwM_117.341 Anthoceros agrestis HOM05D000001 ORTHO05D000003 8.6e-06 53.1 34 61.8
AagrBONN_evm.TU.Sc2ySwM_117.3663 Anthoceros agrestis HOM05D000001 ORTHO05D000003 8.6e-06 53.1 31 67.7
AagrBONN_evm.TU.Sc2ySwM_117.3842 Anthoceros agrestis HOM05D000001 ORTHO05D000003 8.6e-06 53.1 41 56.1
AagrBONN_evm.TU.Sc2ySwM_117.3995 Anthoceros agrestis HOM05D000001 ORTHO05D000003 8.6e-06 53.1 39 59.0
AagrBONN_evm.TU.Sc2ySwM_117.4176 Anthoceros agrestis HOM05D000001 ORTHO05D000003 8.6e-06 53.1 39 61.5
AagrBONN_evm.TU.Sc2ySwM_117.4187 Anthoceros agrestis HOM05D000001 ORTHO05D000003 8.6e-06 53.1 39 61.5
AagrBONN_evm.TU.Sc2ySwM_228.18 Anthoceros agrestis HOM05D000001 ORTHO05D000003 8.6e-06 53.1 41 56.1
AagrBONN_evm.TU.Sc2ySwM_340.2015 Anthoceros agrestis HOM05D000001 ORTHO05D000003 8.6e-06 53.1 41 61.0
AagrBONN_evm.TU.Sc2ySwM_368.2387 Anthoceros agrestis HOM05D000001 ORTHO05D000003 8.6e-06 53.1 41 58.5
Ca_09034_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009373 8.6e-06 53.1 31 71.0
Migut.B00429 Erythranthe guttata HOM05D005520 ORTHO05D009373 8.6e-06 53.1 41 61.0
Migut.B00430 Erythranthe guttata HOM05D000001 ORTHO05D009373 8.6e-06 53.1 41 61.0
Hma1.2p1_2760F.1_g328070 Hydrangea macrophylla HOM05D000001 ORTHO05D000003 8.6e-06 53.1 41 53.7
Lalb_Chr25g0288151 Lupinus albus HOM05D000001 ORTHO05D009373 8.6e-06 53.1 31 71.0
QL02p069888 Quercus lobata HOM05D000001 ORTHO05D000003 8.6e-06 53.1 41 61.0
THA.LOC104806150 Tarenaya hassleriana HOM05D000001 ORTHO05D000003 8.6e-06 53.1 32 68.8


User provided reference genes

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