Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.4B7523 Arachis hypogaea HOM05D003412 ORTHO05D003962 2.8e-46 188.3 101 100.0
arahy.Tifrunner.gnm1.ann1.LCTE14 Arachis hypogaea HOM05D003412 ORTHO05D003962 1.0e-24 116.7 106 68.9
arahy.Tifrunner.gnm1.ann1.WSUD3I Arachis hypogaea HOM05D003412 ORTHO05D003962 1.8e-24 115.9 106 67.9
arahy.Tifrunner.gnm1.ann1.US2PL9 Arachis hypogaea HOM05D003412 ORTHO05D003962 3.4e-20 101.7 109 58.7
arahy.Tifrunner.gnm1.ann1.7ZMX5M Arachis hypogaea HOM05D003412 ORTHO05D003962 3.8e-19 98.2 96 64.6
Lalb_Chr21g0310081 Lupinus albus HOM05D003412 ORTHO05D003962 1.4e-16 89.7 107 56.1
Lalb_Chr06g0167331 Lupinus albus HOM05D003412 ORTHO05D003962 6.7e-16 87.4 108 55.6
Glyma.10G144000 Glycine max HOM05D003412 ORTHO05D003962 2.0e-15 85.9 102 57.8
Manes.09G180600 Manihot esculenta HOM05D003412 ORTHO05D003962 2.4e-13 79.0 115 48.7
Manes.08G107900 Manihot esculenta HOM05D003412 ORTHO05D003962 1.2e-12 76.6 106 49.1
Glyma.20G092900 Glycine max HOM05D003412 ORTHO05D003962 2.6e-12 75.5 102 51.0
Lj5g0005042 Lotus japonicus HOM05D003412 ORTHO05D003962 2.6e-12 75.5 106 51.9
VMungo0720G0630 Vigna mungo HOM05D003412 ORTHO05D003962 4.5e-12 74.7 102 49.0
QL03p010471 Quercus lobata HOM05D003412 ORTHO05D003962 5.9e-12 74.3 119 47.1
AUR62000468 Chenopodium quinoa HOM05D003412 ORTHO05D003962 7.7e-12 73.9 85 58.8
Lj5A319T47 Lonicera japonica HOM05D003412 ORTHO05D003962 1.3e-11 73.2 86 59.3
Hund07277 Selenicereus undatus HOM05D003412 ORTHO05D003962 1.3e-11 73.2 82 56.1
QL03p010236 Quercus lobata HOM05D003412 ORTHO05D003962 1.7e-11 72.8 123 45.5
CiPaw.08G150800 Carya illinoinensis HOM05D003412 ORTHO05D003962 2.9e-11 72.0 106 50.0
Ca_10195_v3 Cicer arietinum L. HOM05D003412 ORTHO05D003962 3.8e-11 71.6 97 49.5
Hund07273 Selenicereus undatus HOM05D003412 ORTHO05D003962 3.8e-11 71.6 82 54.9
Oeu036644.1 Olea europaea HOM05D003412 ORTHO05D003962 5.0e-11 71.2 105 46.7
RcHm_v2.0_Chr3g0458381 Rosa chinensis HOM05D003412 ORTHO05D003962 5.0e-11 71.2 106 46.2
Medtr1g484830 Medicago truncatula HOM05D003412 ORTHO05D003962 6.5e-11 70.9 84 52.4
Prupe.6G305600 Prunus persica HOM05D003412 ORTHO05D003962 6.5e-11 70.9 100 48.0
TPR.G2623 Trifolium pratense HOM05D003412 ORTHO05D003962 8.5e-11 70.5 106 47.2
Haze_03996 Corylus avellana HOM05D003412 ORTHO05D003962 1.1e-10 70.1 113 46.9
FAN09G0161 Fragaria x ananassa HOM05D003412 ORTHO05D003962 1.1e-10 70.1 103 47.6
FAN14G3569 Fragaria x ananassa HOM05D003412 ORTHO05D003962 1.1e-10 70.1 103 47.6
Psat6g155400 Pisum sativum HOM05D003412 ORTHO05D003962 1.1e-10 70.1 106 45.3
Thecc.05G329000 Theobroma cacao HOM05D003412 ORTHO05D003962 1.1e-10 70.1 98 50.0
CANSAT54G2189 Cannabis sativa HOM05D003412 ORTHO05D003962 2.5e-10 68.9 111 45.9
SGA_v2.0_scaffold279G46784 Striga asiatica HOM05D003412 ORTHO05D003962 2.5e-10 68.9 85 51.8
Actinidia01664 Actinidia chinensis HOM05D003412 ORTHO05D003962 3.2e-10 68.6 84 53.6
EL10Ac4g09549 Beta vulgaris HOM05D003412 ORTHO05D003962 3.2e-10 68.6 91 51.6
CiPaw.07G035400 Carya illinoinensis HOM05D003412 ORTHO05D003962 3.2e-10 68.6 84 52.4
MBI19_g32732_MAGBIO Magnolia biondii HOM05D003412 ORTHO05D003962 3.2e-10 68.6 102 51.0
FAN05G5683 Fragaria x ananassa HOM05D003412 ORTHO05D003962 5.5e-10 67.8 103 46.6
Oeu061921.1 Olea europaea HOM05D003412 ORTHO05D003962 5.5e-10 67.8 71 54.9
Potri.013G003400 Populus trichocarpa HOM05D003412 ORTHO05D003962 5.5e-10 67.8 106 46.2
Hma1.2p1_3841F.1_g337660 Hydrangea macrophylla HOM05D003412 ORTHO05D003962 7.2e-10 67.4 66 63.6
TWI56G0029 Tripterygium wilfordii HOM05D003412 ORTHO05D003962 1.2e-09 66.6 87 50.6
CSS0037128 Camellia sinensis var. sinensis HOM05D003412 ORTHO05D003962 1.6e-09 66.2 106 47.2
Duzib177G0752 Durio zibethinus HOM05D003412 ORTHO05D003962 1.6e-09 66.2 98 46.9
Eucgr.H01317 Eucalyptus grandis HOM05D003412 ORTHO05D003962 1.6e-09 66.2 84 51.2
arahy.Tifrunner.gnm1.ann1.36CNLM Arachis hypogaea HOM05D003412 ORTHO05D003962 2.1e-09 65.9 104 47.1
arahy.Tifrunner.gnm1.ann1.D23GS1 Arachis hypogaea HOM05D003412 ORTHO05D003962 2.1e-09 65.9 104 47.1
MSTRG.5167 Avicennia marina HOM05D003412 ORTHO05D003962 6.1e-09 64.3 98 46.9
COL.COLO4_05512 Corchorus olitorius HOM05D003412 ORTHO05D003962 6.1e-09 64.3 98 46.9
MELO3C004154.2 Cucumis melo HOM05D003412 ORTHO05D003962 6.1e-09 64.3 106 46.2
Migut.N00969 Erythranthe guttata HOM05D003412 ORTHO05D003962 6.1e-09 64.3 88 48.9
ClCG02G014670 Citrullus lanatus HOM05D003412 ORTHO05D003962 8.0e-09 63.9 87 48.3
Ciclev10012076m.g Citrus clementina HOM05D003412 ORTHO05D003962 8.0e-09 63.9 87 50.6
Gohir.D13G116700 Gossypium hirsutum HOM05D003412 ORTHO05D003962 8.0e-09 63.9 98 46.9
Gorai.013G131200 Gossypium raimondii HOM05D003412 ORTHO05D003962 8.0e-09 63.9 98 46.9
TAR365G0256 Trochodendron aralioides HOM05D003412 ORTHO05D003962 8.0e-09 63.9 116 43.1
MSTRG.16423 Avicennia marina HOM05D003412 ORTHO05D003962 1.0e-08 63.5 98 44.9
BcaC05g29778 Brassica carinata HOM05D003412 ORTHO05D003962 1.0e-08 63.5 97 46.4
BcaB04g19713 Brassica carinata HOM05D003412 ORTHO05D003962 1.4e-08 63.2 84 48.8
AUR62006809 Chenopodium quinoa HOM05D003412 ORTHO05D003962 1.4e-08 63.2 109 43.1
Duzib128G1566 Durio zibethinus HOM05D003412 ORTHO05D003962 1.4e-08 63.2 106 45.3
Sed0023403 Sechium edule HOM05D003412 ORTHO05D003962 1.4e-08 63.2 87 49.4
TAR636G2549 Trochodendron aralioides HOM05D003412 ORTHO05D003962 1.4e-08 63.2 110 44.5
MD04G1187100 Malus domestica HOM05D003412 ORTHO05D003962 1.8e-08 62.8 108 42.6
Actinidia16911 Actinidia chinensis HOM05D003412 ORTHO05D003962 2.3e-08 62.4 86 47.7
Ah.06g190650 Amaranthus hybridus HOM05D003412 ORTHO05D003962 3.0e-08 62.0 105 44.8
BraA09t36208Z Brassica rapa HOM05D003412 ORTHO05D003962 3.0e-08 62.0 87 44.8
CARHR186800 Cardamine hirsuta HOM05D003412 ORTHO05D003962 3.0e-08 62.0 84 47.6
DCAR_029287 Daucus carota HOM05D003412 ORTHO05D003962 3.0e-08 62.0 90 45.6
Sabra05G0000900 Salix brachista HOM05D003412 ORTHO05D003962 3.0e-08 62.0 106 46.2
Sabra13G0002900 Salix brachista HOM05D003412 ORTHO05D003962 3.0e-08 62.0 106 45.3
Sc16g0009380 Simmondsia chinensis HOM05D003412 ORTHO05D003962 3.0e-08 62.0 105 42.9
C09p06270 Brassica napus HOM05D003412 ORTHO05D003962 4.0e-08 61.6 64 59.4
Hma1.2p1_0052F.1_g030415 Hydrangea macrophylla HOM05D003412 ORTHO05D003962 4.0e-08 61.6 98 45.9
Rhsim05G0121800 Rhododendron simsii HOM05D003412 ORTHO05D003962 4.0e-08 61.6 86 47.7
TAR365G0905 Trochodendron aralioides HOM05D003412 ORTHO05D003962 4.0e-08 61.6 116 42.2
BcaC05g30086 Brassica carinata HOM05D003412 ORTHO05D003962 5.2e-08 61.2 84 46.4
C05p61450 Brassica napus HOM05D003412 ORTHO05D003962 5.2e-08 61.2 84 46.4
BolC5t34803H Brassica oleracea HOM05D003412 ORTHO05D003962 5.2e-08 61.2 84 46.4
Thhalv10004552m.g Eutrema salsugineum HOM05D003412 ORTHO05D003962 5.2e-08 61.2 84 46.4
Potri.005G003600 Populus trichocarpa HOM05D003412 ORTHO05D003962 5.2e-08 61.2 106 46.2
Aqoxy2G02528 Aquilegia oxysepala HOM05D003412 ORTHO05D003962 6.7e-08 60.8 106 44.3
Dinv30941 Davidia involucrata HOM05D003412 ORTHO05D003962 6.7e-08 60.8 95 47.4
vmacro01603 Vaccinium macrocarpon HOM05D003412 ORTHO05D003962 6.7e-08 60.8 91 46.2
Aa31LG5G16210 Aethionema arabicum HOM05D003412 ORTHO05D003962 8.8e-08 60.5 84 45.2
arahy.Tifrunner.gnm1.ann1.B9BAGZ Arachis hypogaea HOM05D003412 ORTHO05D003962 8.8e-08 60.5 39 84.6
ECA236G3082 Erigeron canadensis HOM05D003412 ORTHO05D003962 1.1e-07 60.1 84 46.4
SalBow1G0001 Salvia bowleyana HOM05D003412 ORTHO05D003962 1.1e-07 60.1 77 49.4
SGA_v2.0_scaffold117G32404 Striga asiatica HOM05D003412 ORTHO05D003962 1.1e-07 60.1 77 51.9
A05p42230 Brassica napus HOM05D003412 ORTHO05D003962 1.5e-07 59.7 97 43.3
A09p05660 Brassica napus HOM05D003412 ORTHO05D003962 1.5e-07 59.7 84 46.4
BraA05t22941Z Brassica rapa HOM05D003412 ORTHO05D003962 1.5e-07 59.7 97 43.3
Sp3g04690 Schrenkiella parvula HOM05D003412 ORTHO05D003962 1.5e-07 59.7 84 45.2
THA.LOC104821745 Tarenaya hassleriana HOM05D003412 ORTHO05D003962 1.5e-07 59.7 84 45.2
unitig_22.g5801 Utricularia gibba HOM05D003412 ORTHO05D003962 1.5e-07 59.7 97 45.4
Cpa.g.sc48.220 Carica papaya HOM05D003412 ORTHO05D003962 2.0e-07 59.3 83 49.4
Sabra05G0015000 Salix brachista HOM05D003412 ORTHO05D003962 2.6e-07 58.9 105 41.9
AT3G05830 Arabidopsis thaliana HOM05D003412 ORTHO05D003962 3.3e-07 58.5 84 44.0
Sp2g21210 Schrenkiella parvula HOM05D003412 ORTHO05D003962 3.3e-07 58.5 102 43.1
AL6G38640 Arabidopsis lyrata HOM05D003412 ORTHO05D003962 4.4e-07 58.2 84 45.2
Thhalv10021934m.g Eutrema salsugineum HOM05D003412 ORTHO05D003962 4.4e-07 58.2 97 42.3
Aa31LG11G9870 Aethionema arabicum HOM05D003412 ORTHO05D003962 5.7e-07 57.8 84 44.0
Carub.0006s2442 Capsella rubella HOM05D003412 ORTHO05D003962 5.7e-07 57.8 84 45.2
CARHR080290 Cardamine hirsuta HOM05D003412 ORTHO05D003962 5.7e-07 57.8 97 43.3
TAR362G0077 Trochodendron aralioides HOM05D003412 ORTHO05D003962 5.7e-07 57.8 106 41.5
AL3G16570 Arabidopsis lyrata HOM05D003412 ORTHO05D003962 7.5e-07 57.4 84 42.9
Hma1.2p1_3304F.1_g335080 Hydrangea macrophylla HOM05D003412 ORTHO05D003962 7.5e-07 57.4 84 47.6
MBI18_g09639_MAGBIO Magnolia biondii HOM05D003412 ORTHO05D003962 7.5e-07 57.4 71 50.7
PGR083G2508 Punica granatum HOM05D003412 ORTHO05D003962 7.5e-07 57.4 83 47.0
THA.LOC104818749 Tarenaya hassleriana HOM05D003412 ORTHO05D003962 7.5e-07 57.4 84 44.0
AT5G26770 Arabidopsis thaliana HOM05D003412 ORTHO05D003962 1.3e-06 56.6 84 45.2
Nn4g25397 Nelumbo nucifera HOM05D003412 ORTHO05D003962 1.3e-06 56.6 87 46.0
Solyc01g101130.3 Solanum lycopersicum HOM05D003412 ORTHO05D003962 1.3e-06 56.6 107 39.3
CsaV3_2G007300 Cucumis sativus L. HOM05D003412 ORTHO05D003962 2.2e-06 55.8 124 39.5
MSTRG.27914 Avicennia marina HOM05D003412 ORTHO05D003962 3.7e-06 55.1 90 42.2
Carub.0003s0519 Capsella rubella HOM05D003412 ORTHO05D003962 3.7e-06 55.1 86 40.7
Lj9C230G11 Lonicera japonica HOM05D003412 ORTHO05D003962 3.7e-06 55.1 78 48.7
Rhsim11G0101900 Rhododendron simsii HOM05D003412 ORTHO05D003962 3.7e-06 55.1 97 42.3
Sopen01g044580 Solanum pennellii HOM05D003412 ORTHO05D003962 3.7e-06 55.1 106 38.7
Zm00001eb354610 Zea mays HOM05D003412 ORTHO05D003962 3.7e-06 55.1 106 38.7
A06p37010 Brassica napus HOM05D003412 ORTHO05D003962 4.8e-06 54.7 84 44.0
BraA06t26626Z Brassica rapa HOM05D003412 ORTHO05D003962 4.8e-06 54.7 84 44.0
Dinv24506 Davidia involucrata HOM05D003412 ORTHO05D003962 4.8e-06 54.7 67 55.2
PSO210G2054 Papaver somniferum HOM05D003412 ORTHO05D003962 4.8e-06 54.7 96 41.7
PGR031G1608 Punica granatum HOM05D003412 ORTHO05D003962 4.8e-06 54.7 67 52.2
Lalb_Chr04g0260311 Lupinus albus HOM05D003412 ORTHO05D003962 6.3e-06 54.3 95 41.1
BcaNung03675 Brassica carinata HOM05D003412 ORTHO05D003962 8.2e-06 53.9 84 42.9
C07p41480 Brassica napus HOM05D003412 ORTHO05D003962 8.2e-06 53.9 84 42.9
BolC7t44681H Brassica oleracea HOM05D003412 ORTHO05D003962 8.2e-06 53.9 84 42.9
PSO761G0645 Papaver somniferum HOM05D003412 ORTHO05D003962 8.2e-06 53.9 96 41.7
vmacro19768 Vaccinium macrocarpon HOM05D003412 ORTHO05D003962 8.2e-06 53.9 115 36.5


User provided reference genes

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