Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.4A1F8H Arachis hypogaea HOM05D006946 ORTHO05D008634 8.9e-204 713.4 360 100.0
arahy.Tifrunner.gnm1.ann1.GB8G30 Arachis hypogaea HOM05D006946 ORTHO05D008634 2.7e-200 701.8 360 98.1
Phvul.010G049700 Phaseolus vulgaris HOM05D006946 ORTHO05D008634 1.0e-143 513.8 359 73.5
VMungo0331G1797 Vigna mungo HOM05D006946 ORTHO05D008634 6.7e-143 511.1 359 73.0
Glyma.03G110700 Glycine max HOM05D006946 ORTHO05D008634 2.0e-142 509.6 360 73.3
Ca_25802_v3 Cicer arietinum L. HOM05D006946 ORTHO05D008634 4.5e-139 498.4 356 69.9
Medtr8g006950 Medicago truncatula HOM05D006946 ORTHO05D008634 3.2e-137 492.3 360 69.7
Lj3g0014310 Lotus japonicus HOM05D006946 ORTHO05D008634 5.2e-135 485.0 334 73.1
TPR.G33124 Trifolium pratense HOM05D006946 ORTHO05D008634 1.5e-134 483.4 359 68.8
Lalb_Chr07g0195411 Lupinus albus HOM05D006946 ORTHO05D008634 2.2e-130 469.5 361 68.7
Psat4g224200 Pisum sativum HOM05D006946 ORTHO05D008634 8.6e-114 414.5 412 56.3
QL04p030124 Quercus lobata HOM05D006946 ORTHO05D008634 9.5e-113 411.0 358 61.2
Atru.chr5.122 Acer truncatum HOM05D006946 ORTHO05D008634 5.4e-108 395.2 358 56.1
Thecc.01G395400 Theobroma cacao HOM05D006946 ORTHO05D008634 1.0e-106 391.0 352 57.1
GSVIVG01018284001 Vitis vinifera HOM05D006946 ORTHO05D008634 6.6e-106 388.3 357 56.0
FAN06G0853 Fragaria x ananassa HOM05D006946 ORTHO05D008634 5.6e-105 385.2 365 55.1
FvH4_7g10220 Fragaria vesca HOM05D006946 ORTHO05D008634 1.2e-104 384.0 365 54.8
Haze_02851 Corylus avellana HOM05D006946 ORTHO05D008634 4.7e-104 382.1 421 51.1
FAN10G0617 Fragaria x ananassa HOM05D006946 ORTHO05D008634 6.1e-104 381.7 361 54.3
FAN06G0591 Fragaria x ananassa HOM05D006946 ORTHO05D008634 8.0e-104 381.3 365 54.8
Cfa011066 Carpinus fangiana HOM05D006946 ORTHO05D008634 1.8e-103 380.2 426 51.2
Ciclev10020918m.g Citrus clementina HOM05D006946 ORTHO05D008634 2.3e-103 379.8 356 55.3
FAN10G1802 Fragaria x ananassa HOM05D006946 ORTHO05D008634 5.2e-103 378.6 361 54.0
FAN03G2893 Fragaria x ananassa HOM05D006946 ORTHO05D008634 2.0e-102 376.7 365 54.0
Duzib133G0968 Durio zibethinus HOM05D006946 ORTHO05D008634 9.8e-102 374.4 356 54.5
CANSAT25G1232 Cannabis sativa HOM05D006946 ORTHO05D008634 4.1e-100 369.0 364 53.8
RcHm_v2.0_Chr1g0347961 Rosa chinensis HOM05D006946 ORTHO05D008634 4.6e-99 365.5 358 53.1
THA.LOC104817188 Tarenaya hassleriana HOM05D006946 ORTHO05D008634 1.0e-98 364.4 357 54.6
PGR042G0965 Punica granatum HOM05D006946 ORTHO05D008634 6.6e-98 361.7 362 51.7
Actinidia32506 Actinidia chinensis HOM05D006946 ORTHO05D008634 2.5e-97 359.8 354 54.2
CSS0010598 Camellia sinensis var. sinensis HOM05D006946 ORTHO05D008634 1.2e-96 357.5 358 53.6
TAR629G0179 Trochodendron aralioides HOM05D006946 ORTHO05D008634 1.6e-96 357.1 364 51.6
COL.COLO4_12403 Corchorus olitorius HOM05D006946 ORTHO05D008634 6.2e-96 355.1 359 54.3
Potri.002G138000 Populus trichocarpa HOM05D006946 ORTHO05D008634 1.5e-94 350.5 359 52.6
Rhsim07G0036200 Rhododendron simsii HOM05D006946 ORTHO05D008634 1.5e-94 350.5 357 50.4
vmacro13499 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 3.4e-94 349.4 358 50.8
Gorai.008G109100 Gossypium raimondii HOM05D006946 ORTHO05D008634 2.9e-93 346.3 355 53.2
Hma1.2p1_0072F.1_g038310 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 3.2e-92 342.8 359 52.6
Aqoxy1G01627 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 4.1e-92 342.4 359 50.7
Nitab4.5_0007027g0020 Nicotiana tabacum HOM05D006946 ORTHO05D008634 4.1e-92 342.4 351 52.7
Aqoxy5G04137 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 5.4e-92 342.0 357 51.3
TWI14G0580 Tripterygium wilfordii HOM05D006946 ORTHO05D008634 9.2e-92 341.3 341 55.7
Cc02_g25140 Coffea canephora HOM05D006946 ORTHO05D008634 3.5e-91 339.3 359 53.5
Gohir.D12G100200 Gossypium hirsutum HOM05D006946 ORTHO05D008634 1.3e-90 337.4 355 51.8
Medtr5g027110 Medicago truncatula HOM05D006946 ORTHO05D008634 2.5e-89 333.2 250 69.6
Sp5g02920 Schrenkiella parvula HOM05D006946 ORTHO05D008634 4.3e-89 332.4 278 57.2
PGSC0003DMG400025996 Solanum tuberosum HOM05D006946 ORTHO05D008634 2.1e-88 330.1 353 50.4
HanXRQChr13g0423251 Helianthus annuus HOM05D006946 ORTHO05D008634 2.8e-88 329.7 326 52.5
Solyc01g090220.4 Solanum lycopersicum HOM05D006946 ORTHO05D008634 3.6e-88 329.3 353 50.4
MSTRG.20688 Avicennia marina HOM05D006946 ORTHO05D008634 6.2e-88 328.6 354 49.7
CAN.G1473.5 Capsicum annuum HOM05D006946 ORTHO05D008634 1.4e-87 327.4 319 55.2
Sc02g0003120 Simmondsia chinensis HOM05D006946 ORTHO05D008634 1.4e-87 327.4 365 48.2
CARHR170620 Cardamine hirsuta HOM05D006946 ORTHO05D008634 2.3e-87 326.6 274 56.6
Migut.B01532 Erythranthe guttata HOM05D006946 ORTHO05D008634 1.2e-86 324.3 352 50.9
ECA240G0199 Erigeron canadensis HOM05D006946 ORTHO05D008634 1.3e-85 320.9 358 50.3
PSO675G1257 Papaver somniferum HOM05D006946 ORTHO05D008634 2.2e-85 320.1 360 48.9
PSO717G0092 Papaver somniferum HOM05D006946 ORTHO05D008634 2.2e-85 320.1 360 48.6
vmacro13524 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 2.2e-85 320.1 418 43.3
Thhalv10006060m.g Eutrema salsugineum HOM05D006946 ORTHO05D008634 2.9e-85 319.7 282 55.7
AT3G60300 Arabidopsis thaliana HOM05D006946 ORTHO05D008634 3.7e-85 319.3 288 54.9
Sopen01g036020 Solanum pennellii HOM05D006946 ORTHO05D008634 8.4e-85 318.2 353 48.2
Carub.0005s2704 Capsella rubella HOM05D006946 ORTHO05D008634 1.4e-84 317.4 278 54.7
Gohir.A12G097300 Gossypium hirsutum HOM05D006946 ORTHO05D008634 1.9e-84 317.0 249 61.8
Eucgr.E01546 Eucalyptus grandis HOM05D006946 ORTHO05D008634 3.2e-84 316.2 364 47.3
SalBow5G3575 Salvia bowleyana HOM05D006946 ORTHO05D008634 5.6e-81 305.4 351 49.0
Aa31LG10G14420 Aethionema arabicum HOM05D006946 ORTHO05D008634 7.3e-81 305.1 355 48.7
Lsat_1_v5_gn_3_126900 Lactuca sativa HOM05D006946 ORTHO05D008634 1.2e-80 304.3 361 47.9
Nn1g00836 Nelumbo nucifera HOM05D006946 ORTHO05D008634 6.2e-80 302.0 356 47.8
Sabra02G0106500 Salix brachista HOM05D006946 ORTHO05D008634 1.1e-79 301.2 438 42.7
C04p32350 Brassica napus HOM05D006946 ORTHO05D008634 3.4e-78 296.2 279 53.0
AL5G42520 Arabidopsis lyrata HOM05D006946 ORTHO05D008634 9.9e-78 294.7 274 53.3
Zm00001eb200010 Zea mays HOM05D006946 ORTHO05D008634 1.3e-77 294.3 362 48.1
A04p01710 Brassica napus HOM05D006946 ORTHO05D008634 2.4e-76 290.0 274 51.5
EL10Ac1g00757 Beta vulgaris HOM05D006946 ORTHO05D008634 7.1e-76 288.5 325 47.7
Nitab4.5_0000920g0010 Nicotiana tabacum HOM05D006946 ORTHO05D008634 2.7e-75 286.6 369 46.9
CiPaw.14G020200 Carya illinoinensis HOM05D006946 ORTHO05D008634 3.9e-74 282.7 216 62.0
BraA04t15895Z Brassica rapa HOM05D006946 ORTHO05D008634 5.6e-73 278.9 292 48.3
BolC4t24784H Brassica oleracea HOM05D006946 ORTHO05D008634 1.6e-72 277.3 381 43.6
ATR0057G021 Amborella trichopoda HOM05D006946 ORTHO05D008634 6.2e-72 275.4 329 45.9
SGA_v2.0_scaffold340G49324 Striga asiatica HOM05D006946 ORTHO05D008634 4.0e-71 272.7 380 42.4
Manes.05G055200 Manihot esculenta HOM05D006946 ORTHO05D008634 7.1e-68 261.9 259 54.4
AUR62023403 Chenopodium quinoa HOM05D006946 ORTHO05D008634 1.2e-67 261.2 339 43.1
HPP92_022105 Vanilla planifolia HOM05D006946 ORTHO05D008634 1.6e-67 260.8 364 41.5
unitig_750.g28410 Utricularia gibba HOM05D006946 ORTHO05D008634 4.6e-67 259.2 370 44.1
HPP92_022132 Vanilla planifolia HOM05D006946 ORTHO05D008634 1.0e-66 258.1 364 41.8
Ah.05g177890 Amaranthus hybridus HOM05D006946 ORTHO05D008634 1.3e-66 257.7 312 44.6
Dinv43613 Davidia involucrata HOM05D006946 ORTHO05D008634 8.4e-61 238.4 247 53.8
Actinidia18349 Actinidia chinensis HOM05D006946 ORTHO05D008634 1.4e-60 237.7 258 51.6
Prupe.2G132200 Prunus persica HOM05D006946 ORTHO05D008634 2.4e-60 236.9 260 48.1
Peaxi162Scf00475g00422 Petunia axillaris HOM05D000253 ORTHO05D000149 9.3e-60 235.0 417 38.6
AUR62013748 Chenopodium quinoa HOM05D006946 ORTHO05D008634 3.7e-56 223.0 334 40.4
Mapoly0040s0025 Marchantia polymorpha HOM05D006946 ORTHO05D008634 5.3e-55 219.2 333 39.0
Hma1.2p1_0072F.1_g038320 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 1.6e-51 207.6 171 58.5
Hund27407 Selenicereus undatus HOM05D006946 ORTHO05D008634 3.9e-50 203.0 563 29.7
Lj9A556T13 Lonicera japonica HOM05D006946 ORTHO05D008634 1.4e-47 194.5 260 43.8
AagrBONN_evm.TU.Sc2ySwM_117.2461 Anthoceros agrestis HOM05D006946 ORTHO05D008634 3.1e-47 193.4 300 38.7
PSO017G5203 Papaver somniferum HOM05D006946 ORTHO05D008634 8.7e-42 175.3 182 48.9
SMO352G0084 Selaginella moellendorffii HOM05D006946 ORTHO05D008634 5.9e-38 162.5 167 48.5
Potri.014G048000 Populus trichocarpa HOM05D006946 ORTHO05D008634 1.9e-36 157.5 210 43.8
CBR_g38735 Chara braunii HOM05D000019 ORTHO05D000353 1.4e-34 151.4 347 29.4
Psat1g142640 Pisum sativum HOM05D006946 ORTHO05D008634 1.7e-32 144.4 120 64.2
Psat2g026240 Pisum sativum HOM05D006946 ORTHO05D008634 2.2e-29 134.0 128 59.4
Cpa.g.sc22.64 Carica papaya HOM05D006946 ORTHO05D008634 2.9e-29 133.7 104 58.7
Psat1g142600 Pisum sativum HOM05D006946 ORTHO05D008634 1.1e-28 131.7 102 67.6
Cpa.g.sc22.65 Carica papaya HOM05D006946 ORTHO05D008634 1.8e-23 114.4 234 36.8
MCO13G420 Micromonas commoda HOM05D006946 ORTHO05D008634 3.8e-21 106.7 173 33.5
Psat6g138360 Pisum sativum HOM05D000346 ORTHO05D008634 5.2e-18 96.3 85 61.2
MD02G1213400 Malus domestica HOM05D006946 ORTHO05D008634 6.7e-18 95.9 111 45.9
Psat0s4856g0040 Pisum sativum HOM05D006946 ORTHO05D008634 2.0e-17 94.4 70 70.0
Cre13.g581801 Chlamydomonas reinhardtii HOM05D006946 ORTHO05D008634 8.5e-13 79.0 254 27.2
AUR62044571 Chenopodium quinoa HOM05D006946 ORTHO05D008634 2.5e-12 77.4 344 24.4
Psat5g300840 Pisum sativum HOM05D006946 ORTHO05D008634 7.2e-12 75.9 62 58.1
SEGI_22555 Sequoiadendron giganteum HOM05D006946 ORTHO05D000002 1.0e-10 72.0 140 38.6
PRCOL_00003801 Prasinoderma coloniale HOM05D013257 ORTHO05D015313 3.7e-08 63.5 221 23.5
Hma1.2p1_0072F.1_g038330 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 1.1e-07 62.0 44 61.4
QL04p089514 Quercus lobata HOM05D006946 ORTHO05D008634 1.2e-06 58.5 37 67.6
Sabra07G0104700 Salix brachista HOM05D003486 ORTHO05D004600 3.5e-06 57.0 114 29.8
Duzib151G0706 Durio zibethinus HOM05D003486 ORTHO05D004600 5.9e-06 56.2 114 31.6
Potri.007G128300 Populus trichocarpa HOM05D003486 ORTHO05D004600 7.7e-06 55.8 117 29.9


User provided reference genes

Program Settings