Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.44XN4P Arachis hypogaea HOM05D006192 ORTHO05D008003 2.8e-282 974.5 477 100.0
arahy.Tifrunner.gnm1.ann1.S5W95P Arachis hypogaea HOM05D006192 ORTHO05D008003 1.9e-278 961.8 477 98.3
Glyma.03G131100 Glycine max HOM05D006192 ORTHO05D008003 1.9e-249 865.5 475 88.8
Glyma.19G133100 Glycine max HOM05D006192 ORTHO05D008003 1.9e-249 865.5 478 88.3
VMungo1383G3565 Vigna mungo HOM05D006192 ORTHO05D008003 3.0e-247 858.2 478 87.9
Lalb_Chr20g0110241 Lupinus albus HOM05D006192 ORTHO05D008003 3.3e-246 854.7 476 87.8
Medtr7g090510 Medicago truncatula HOM05D006192 ORTHO05D008003 8.1e-245 850.1 478 85.6
Phvul.001G127100 Phaseolus vulgaris HOM05D006192 ORTHO05D008003 1.1e-244 849.7 478 86.6
Ca_08416_v3 Cicer arietinum L. HOM05D006192 ORTHO05D008003 4.4e-243 844.3 475 85.3
TPR.G32742 Trifolium pratense HOM05D006192 ORTHO05D008003 5.4e-241 837.4 478 84.5
Lj1g0026013 Lotus japonicus HOM05D006192 ORTHO05D008003 1.2e-240 836.3 478 84.9
Psat3g076360 Pisum sativum HOM05D006192 ORTHO05D008003 1.0e-239 833.2 476 83.8
Duzib187G0943 Durio zibethinus HOM05D006192 ORTHO05D008003 8.4e-234 813.5 481 82.3
QL02p001073 Quercus lobata HOM05D006192 ORTHO05D008003 4.2e-233 811.2 482 82.4
Haze_18173 Corylus avellana HOM05D006192 ORTHO05D008003 7.9e-232 807.0 483 81.2
COL.COLO4_21071 Corchorus olitorius HOM05D006192 ORTHO05D008003 1.7e-231 805.8 482 81.5
Cfa017964 Carpinus fangiana HOM05D006192 ORTHO05D008003 3.0e-231 805.1 483 81.0
ClCG05G017890 Citrullus lanatus HOM05D006192 ORTHO05D008003 3.3e-230 801.6 484 81.8
Potri.006G228000 Populus trichocarpa HOM05D006192 ORTHO05D008003 4.3e-230 801.2 483 80.5
CsaV3_4G035660 Cucumis sativus L. HOM05D006192 ORTHO05D008003 1.3e-229 799.7 484 81.6
CiPaw.15G038100 Carya illinoinensis HOM05D006192 ORTHO05D008003 1.6e-229 799.3 483 80.1
MELO3C016873.2 Cucumis melo HOM05D006192 ORTHO05D008003 2.1e-229 798.9 484 81.4
Prupe.1G411000 Prunus persica HOM05D006192 ORTHO05D008003 2.8e-229 798.5 483 81.0
Manes.03G048700 Manihot esculenta HOM05D006192 ORTHO05D008003 4.8e-229 797.7 485 80.6
Thecc.09G055000 Theobroma cacao HOM05D006192 ORTHO05D008003 1.8e-228 795.8 482 79.9
Dinv27994 Davidia involucrata HOM05D006192 ORTHO05D008003 2.4e-228 795.4 483 81.8
TWI34G1683 Tripterygium wilfordii HOM05D006192 ORTHO05D008003 2.4e-228 795.4 483 81.2
Ciclev10008149m.g Citrus clementina HOM05D006192 ORTHO05D008003 5.3e-228 794.3 480 80.8
MD15G1058400 Malus domestica HOM05D006192 ORTHO05D008003 1.2e-227 793.1 484 80.4
Lj7A269G19 Lonicera japonica HOM05D006192 ORTHO05D008003 1.5e-227 792.7 483 79.9
Oeu009349.1 Olea europaea HOM05D006192 ORTHO05D008003 1.5e-227 792.7 483 80.5
Dinv22891 Davidia involucrata HOM05D006192 ORTHO05D008003 2.0e-227 792.3 483 81.0
Cc08_g10700 Coffea canephora HOM05D006192 ORTHO05D008003 2.6e-227 792.0 485 81.0
Sed0014899 Sechium edule HOM05D006192 ORTHO05D008003 5.8e-227 790.8 484 80.4
FAN15G2167 Fragaria x ananassa HOM05D006192 ORTHO05D008003 9.9e-227 790.0 483 80.1
Nitab4.5_0005436g0010 Nicotiana tabacum HOM05D006192 ORTHO05D008003 1.3e-226 789.6 483 81.0
FvH4_2g31750 Fragaria vesca HOM05D006192 ORTHO05D008003 1.7e-226 789.3 483 80.1
FAN20G2998 Fragaria x ananassa HOM05D006192 ORTHO05D008003 2.9e-226 788.5 483 80.1
FAN24G0058 Fragaria x ananassa HOM05D006192 ORTHO05D008003 2.9e-226 788.5 483 79.9
Gohir.A05G041700 Gossypium hirsutum HOM05D006192 ORTHO05D008003 2.9e-226 788.5 482 79.5
Nitab4.5_0002829g0050 Nicotiana tabacum HOM05D006192 ORTHO05D008003 2.9e-226 788.5 483 80.7
CSS0041370 Camellia sinensis var. sinensis HOM05D006192 ORTHO05D008003 6.4e-226 787.3 483 80.3
FAN27G0797 Fragaria x ananassa HOM05D006192 ORTHO05D008003 6.4e-226 787.3 483 80.1
Oeu003988.1 Olea europaea HOM05D006192 ORTHO05D008003 6.4e-226 787.3 483 80.5
PGSC0003DMG400019063 Solanum tuberosum HOM05D006192 ORTHO05D008003 6.4e-226 787.3 483 80.7
Peaxi162Scf00327g00612 Petunia axillaris HOM05D006192 ORTHO05D008003 8.4e-226 786.9 484 80.8
Nn7g37295 Nelumbo nucifera HOM05D006192 ORTHO05D008003 1.9e-225 785.8 483 78.7
Eucgr.C00658 Eucalyptus grandis HOM05D006192 ORTHO05D008003 5.5e-225 784.3 484 78.9
Actinidia30319 Actinidia chinensis HOM05D006192 ORTHO05D008003 7.1e-225 783.9 483 79.9
RcHm_v2.0_Chr6g0311071 Rosa chinensis HOM05D006192 ORTHO05D008003 7.1e-225 783.9 483 79.9
Gorai.009G044500 Gossypium raimondii HOM05D006192 ORTHO05D008003 9.3e-225 783.5 482 79.3
Sopen08g018650 Solanum pennellii HOM05D006192 ORTHO05D008003 1.6e-224 782.7 483 80.3
Gohir.D05G043400 Gossypium hirsutum HOM05D006192 ORTHO05D008003 1.3e-223 779.6 482 78.4
THA.LOC104818573 Tarenaya hassleriana HOM05D006192 ORTHO05D008003 1.8e-223 779.2 478 79.9
PSO384G1492 Papaver somniferum HOM05D006192 ORTHO05D008003 5.1e-223 777.7 489 78.7
Sabra06G0176500 Salix brachista HOM05D006192 ORTHO05D008003 1.1e-222 776.5 514 74.7
CANSAT25G1130 Cannabis sativa HOM05D006192 ORTHO05D008003 3.3e-222 775.0 477 79.9
Solyc08g063080.3 Solanum lycopersicum HOM05D006192 ORTHO05D008003 4.3e-222 774.6 483 79.9
EL10Ac2g03859 Beta vulgaris HOM05D006192 ORTHO05D008003 5.6e-222 774.2 483 78.7
PSO339G5117 Papaver somniferum HOM05D006192 ORTHO05D008003 1.3e-221 773.1 489 78.5
Migut.A00129 Erythranthe guttata HOM05D006192 ORTHO05D008003 1.6e-221 772.7 486 78.6
PGR031G3391 Punica granatum HOM05D006192 ORTHO05D008003 2.8e-221 771.9 488 79.3
CAN.G9.23 Capsicum annuum HOM05D006192 ORTHO05D008003 3.7e-221 771.5 483 78.9
Rhsim07G0125300 Rhododendron simsii HOM05D006192 ORTHO05D008003 1.1e-220 770.0 483 78.9
Ah.11g044810 Amaranthus hybridus HOM05D006192 ORTHO05D008003 6.9e-220 767.3 483 78.7
AUR62039119 Chenopodium quinoa HOM05D006192 ORTHO05D008003 9.0e-220 766.9 487 78.6
AUR62043945 Chenopodium quinoa HOM05D006192 ORTHO05D008003 9.0e-220 766.9 487 78.6
AUR62009135 Chenopodium quinoa HOM05D006192 ORTHO05D008003 3.4e-219 765.0 483 78.5
Thhalv10025085m.g Eutrema salsugineum HOM05D006192 ORTHO05D008003 2.2e-218 762.3 481 78.2
AL7G18640 Arabidopsis lyrata HOM05D006192 ORTHO05D008003 2.9e-218 761.9 479 78.3
AT4G33030 Arabidopsis thaliana HOM05D006192 ORTHO05D008003 4.9e-218 761.1 481 78.2
Sp7g30790 Schrenkiella parvula HOM05D006192 ORTHO05D008003 1.1e-217 760.0 479 78.5
HanXRQChr06g0173891 Helianthus annuus HOM05D006192 ORTHO05D008003 1.4e-217 759.6 487 77.8
Hund19447 Selenicereus undatus HOM05D006192 ORTHO05D008003 1.9e-217 759.2 483 78.3
Sc01g0008030 Simmondsia chinensis HOM05D006192 ORTHO05D008003 3.2e-217 758.4 481 78.0
MSTRG.25952 Avicennia marina HOM05D006192 ORTHO05D008003 7.1e-217 757.3 421 86.7
CARHR241040 Cardamine hirsuta HOM05D006192 ORTHO05D008003 1.2e-216 756.5 480 77.5
Lsat_1_v5_gn_3_23900 Lactuca sativa HOM05D006192 ORTHO05D008003 1.0e-215 753.4 480 77.9
MBI16_g06012_MAGBIO Magnolia biondii HOM05D006192 ORTHO05D008003 1.0e-215 753.4 485 77.5
Os05g0387200 Oryza sativa ssp. japonica HOM05D006192 ORTHO05D008003 1.0e-215 753.4 477 77.8
SalBow4G2073 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.8e-215 752.7 484 77.7
Carub.0007s0745 Capsella rubella HOM05D006192 ORTHO05D008003 3.0e-215 751.9 474 78.5
C01p05650 Brassica napus HOM05D006192 ORTHO05D008003 8.7e-215 750.4 482 77.0
BolC1t00544H Brassica oleracea HOM05D006192 ORTHO05D008003 8.7e-215 750.4 482 77.0
SalBow5G1678 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.1e-214 750.0 484 77.7
DCAR_000802 Daucus carota HOM05D006192 ORTHO05D008003 3.3e-214 748.4 484 76.4
Zm00001eb347070 Zea mays HOM05D006192 ORTHO05D008003 3.3e-214 748.4 481 76.9
BraA03t15213Z Brassica rapa HOM05D006192 ORTHO05D008003 2.8e-213 745.3 479 77.0
ECA246G2418 Erigeron canadensis HOM05D006192 ORTHO05D008003 4.8e-213 744.6 484 75.8
SGA_v2.0_scaffold20G09220 Striga asiatica HOM05D006192 ORTHO05D008003 6.3e-213 744.2 479 77.7
A03p61760 Brassica napus HOM05D006192 ORTHO05D008003 3.4e-211 738.4 479 76.6
C07p59470 Brassica napus HOM05D006192 ORTHO05D008003 2.2e-210 735.7 480 75.6
BcaC09g52100 Brassica carinata HOM05D006192 ORTHO05D008003 1.1e-209 733.4 479 76.2
BraA01t00499Z Brassica rapa HOM05D006192 ORTHO05D008003 4.2e-209 731.5 478 76.2
BolC7t46390H Brassica oleracea HOM05D006192 ORTHO05D008003 9.3e-209 730.3 479 76.0
A01p05160 Brassica napus HOM05D006192 ORTHO05D008003 1.2e-208 729.9 481 75.7
Aa31LG4G11110 Aethionema arabicum HOM05D006192 ORTHO05D008003 1.9e-206 722.6 393 87.3
ATR0307G063 Amborella trichopoda HOM05D006192 ORTHO05D008003 4.8e-205 718.0 477 75.3
GSVIVG01035394001 Vitis vinifera HOM05D006192 ORTHO05D008003 3.4e-203 711.8 486 74.3
Pp3c10_9630 Physcomitrium patens HOM05D006192 ORTHO05D008003 2.6e-195 685.6 422 75.6
HPP92_006663 Vanilla planifolia HOM05D006192 ORTHO05D008003 5.9e-195 684.5 414 79.0
Mapoly0010s0049 Marchantia polymorpha HOM05D006192 ORTHO05D008003 4.7e-192 674.9 409 78.5
CBR_g23789 Chara braunii HOM05D006192 ORTHO05D008003 2.3e-191 672.5 426 75.4
BcaNung02151 Brassica carinata HOM05D006192 ORTHO05D008003 3.0e-191 672.2 480 70.8
AagrBONN_evm.TU.Sc2ySwM_368.1072 Anthoceros agrestis HOM05D006192 ORTHO05D008003 4.8e-189 664.8 389 79.2
SMO239G0161 Selaginella moellendorffii HOM05D006192 ORTHO05D008003 9.1e-188 660.6 400 78.0
TAR369G0638 Trochodendron aralioides HOM05D006192 ORTHO05D008003 3.2e-177 625.5 383 78.1
Cre16.g656400 Chlamydomonas reinhardtii HOM05D006192 ORTHO05D008003 2.1e-176 622.9 392 75.0
unitig_748.g7527 Utricularia gibba HOM05D006192 ORTHO05D008003 1.9e-169 599.7 483 66.0
PRCOL_00003517 Prasinoderma coloniale HOM05D006192 ORTHO05D008003 1.7e-165 586.6 395 67.6
SalBow5G5187 Salvia bowleyana HOM05D006192 ORTHO05D008003 2.2e-165 586.3 431 70.1
MCO15G376 Micromonas commoda HOM05D006192 ORTHO05D008003 3.1e-164 582.4 388 67.3
Atru.chr7.1090 Acer truncatum HOM05D006192 ORTHO05D008003 1.6e-155 553.5 289 91.7
Lj7A268T22 Lonicera japonica HOM05D006192 ORTHO05D008003 5.0e-154 548.5 289 90.3
CDE02G3162 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 5.6e-137 491.9 340 72.1
SEGI_22284 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 7.3e-137 491.5 273 83.2
CDE04G0209 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 2.5e-100 370.2 260 70.0
SalBow8G2204 Salvia bowleyana HOM05D006192 ORTHO05D008003 2.5e-100 370.2 237 75.9
CDE04G3367 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 6.1e-83 312.4 171 85.4
SalBow8G3463 Salvia bowleyana HOM05D006192 ORTHO05D008003 5.0e-61 239.6 196 61.7
MD08G1063500 Malus domestica HOM05D006192 ORTHO05D008003 1.9e-60 237.7 130 85.4
SalBow8G1594 Salvia bowleyana HOM05D006192 ORTHO05D008003 2.7e-59 233.8 135 83.7
SEGI_03729 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 8.0e-59 232.3 136 81.6
SalBow5G3520 Salvia bowleyana HOM05D000200 ORTHO05D000262 7.0e-47 192.6 140 70.7
Atru.chr7.1089 Acer truncatum HOM05D006192 ORTHO05D008003 2.5e-36 157.5 157 54.8
SalBow4G3004 Salvia bowleyana HOM05D006192 ORTHO05D001699 2.5e-36 157.5 94 81.9
SalBow8G4783 Salvia bowleyana HOM05D006192 ORTHO05D358531 3.5e-30 137.1 105 63.8
BcaC01g05298 Brassica carinata HOM05D006192 ORTHO05D091607 1.5e-12 78.6 59 64.4
HPP92_013398 Vanilla planifolia HOM05D000776 ORTHO05D001624 4.3e-12 77.0 284 26.8
Migut.E01129 Erythranthe guttata HOM05D000776 ORTHO05D001624 1.3e-08 65.5 161 28.6
BraA06t24084Z Brassica rapa HOM05D000776 ORTHO05D008161 6.4e-08 63.2 161 26.7
Ciclev10020907m.g Citrus clementina HOM05D000776 ORTHO05D001624 6.4e-08 63.2 156 29.5
Mapoly0068s0034 Marchantia polymorpha HOM05D000776 ORTHO05D001624 1.1e-07 62.4 128 34.4
Mapoly0065s0029 Marchantia polymorpha HOM05D000776 ORTHO05D001624 1.9e-07 61.6 125 32.0
CSS0022914 Camellia sinensis var. sinensis HOM05D000776 ORTHO05D001624 2.4e-07 61.2 172 29.1
BraA01t02620Z Brassica rapa HOM05D000776 ORTHO05D001624 3.2e-07 60.8 161 26.1
Pp3c14_11550 Physcomitrium patens HOM05D000776 ORTHO05D002281 2.1e-06 58.2 151 31.8
HanXRQChr17g0534881 Helianthus annuus HOM05D000776 ORTHO05D001624 2.7e-06 57.8 128 31.2
Medtr1g067530 Medicago truncatula HOM05D000739 ORTHO05D001171 2.7e-06 57.8 299 23.4
FAN08G0150 Fragaria x ananassa HOM05D000776 ORTHO05D001624 3.5e-06 57.4 130 29.2
Sc01g0008640 Simmondsia chinensis HOM05D000776 ORTHO05D001624 3.5e-06 57.4 154 27.9
Haze_27503 Corylus avellana HOM05D000776 ORTHO05D002281 4.6e-06 57.0 159 29.6
Pp3c10_11740 Physcomitrium patens HOM05D000739 ORTHO05D001171 7.8e-06 56.2 311 23.5


User provided reference genes

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