Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.43HIPW Arachis hypogaea HOM05D003993 ORTHO05D005336 6.0e-35 150.2 72 100.0
arahy.Tifrunner.gnm1.ann1.9VYU83 Arachis hypogaea HOM05D003993 ORTHO05D005336 5.5e-20 100.5 92 63.0
arahy.Tifrunner.gnm1.ann1.M0TH05 Arachis hypogaea HOM05D003993 ORTHO05D005336 1.0e-18 96.3 53 86.8
CANSAT11G1844 Cannabis sativa HOM05D003993 ORTHO05D005336 3.7e-16 87.8 53 77.4
Lalb_Chr19g0134741 Lupinus albus HOM05D003993 ORTHO05D005336 3.7e-16 87.8 53 77.4
Duzib170G0292 Durio zibethinus HOM05D003993 ORTHO05D005336 6.3e-16 87.0 53 75.5
Lj3g0021702 Lotus japonicus HOM05D003993 ORTHO05D005336 6.3e-16 87.0 153 37.3
Manes.15G076600 Manihot esculenta HOM05D003993 ORTHO05D005336 8.2e-16 86.7 53 77.4
Eucgr.F03424 Eucalyptus grandis HOM05D003993 ORTHO05D005336 1.1e-15 86.3 53 77.4
Gohir.A04G022400 Gossypium hirsutum HOM05D003993 ORTHO05D005336 1.4e-15 85.9 53 73.6
Gorai.009G427300 Gossypium raimondii HOM05D003993 ORTHO05D005336 1.4e-15 85.9 53 73.6
Psat5g251760 Pisum sativum HOM05D003993 ORTHO05D005336 1.8e-15 85.5 53 75.5
Thecc.07G054200 Theobroma cacao HOM05D003993 ORTHO05D005336 1.8e-15 85.5 53 73.6
TPR.G36724 Trifolium pratense HOM05D003993 ORTHO05D005336 2.4e-15 85.1 53 75.5
CiPaw.11G183500 Carya illinoinensis HOM05D003993 ORTHO05D005336 3.1e-15 84.7 53 75.5
Dinv22306 Davidia involucrata HOM05D003993 ORTHO05D005336 3.1e-15 84.7 53 75.5
Lsat_1_v5_gn_5_5700 Lactuca sativa HOM05D003993 ORTHO05D005336 3.1e-15 84.7 109 43.1
Sed0012816 Sechium edule HOM05D003993 ORTHO05D005336 3.1e-15 84.7 57 70.2
TWI39G1096 Tripterygium wilfordii HOM05D003993 ORTHO05D005336 3.1e-15 84.7 53 73.6
GSVIVG01014604001 Vitis vinifera HOM05D003993 ORTHO05D005336 3.1e-15 84.7 53 75.5
arahy.Tifrunner.gnm1.ann1.C7DQ5B Arachis hypogaea HOM05D003993 ORTHO05D005336 4.1e-15 84.3 52 76.9
Cfa020417 Carpinus fangiana HOM05D003993 ORTHO05D005336 4.1e-15 84.3 53 73.6
Potri.001G417200 Populus trichocarpa HOM05D003993 ORTHO05D005336 4.1e-15 84.3 53 75.5
Migut.H01858 Erythranthe guttata HOM05D003993 ORTHO05D005336 5.3e-15 84.0 53 75.5
Gohir.A01G074400 Gossypium hirsutum HOM05D003993 ORTHO05D005336 5.3e-15 84.0 53 71.7
Gohir.D05G365000 Gossypium hirsutum HOM05D003993 ORTHO05D005336 5.3e-15 84.0 52 73.1
Gorai.002G082300 Gossypium raimondii HOM05D003993 ORTHO05D005336 5.3e-15 84.0 53 71.7
Medtr4g081300 Medicago truncatula HOM05D003993 ORTHO05D005336 5.3e-15 84.0 53 71.7
MELO3C025431.2 Cucumis melo HOM05D003993 ORTHO05D005336 6.9e-15 83.6 57 68.4
HanXRQChr11g0332991 Helianthus annuus HOM05D003993 ORTHO05D005336 6.9e-15 83.6 50 78.0
Os04g0628600 Oryza sativa ssp. japonica HOM05D003993 ORTHO05D005336 6.9e-15 83.6 57 70.2
TWI38G0109 Tripterygium wilfordii HOM05D003993 ORTHO05D005336 6.9e-15 83.6 53 71.7
arahy.Tifrunner.gnm1.ann1.D8T6NU Arachis hypogaea HOM05D003993 ORTHO05D005336 9.0e-15 83.2 52 75.0
Ca_01754_v3 Cicer arietinum L. HOM05D003993 ORTHO05D005336 9.0e-15 83.2 53 73.6
ECA236G0263 Erigeron canadensis HOM05D003993 ORTHO05D005336 9.0e-15 83.2 53 73.6
Medtr2g082910 Medicago truncatula HOM05D003993 ORTHO05D005336 9.0e-15 83.2 53 73.6
Potri.011G132800 Populus trichocarpa HOM05D003993 ORTHO05D005336 9.0e-15 83.2 53 73.6
PGR031G1242 Punica granatum HOM05D003993 ORTHO05D005336 9.0e-15 83.2 53 75.5
QL04p049176 Quercus lobata HOM05D003993 ORTHO05D005336 9.0e-15 83.2 53 73.6
QL05p071299 Quercus lobata HOM05D003993 ORTHO05D005336 9.0e-15 83.2 53 73.6
QL08p013350 Quercus lobata HOM05D003993 ORTHO05D005336 9.0e-15 83.2 53 73.6
QL11p046973 Quercus lobata HOM05D003993 ORTHO05D005336 9.0e-15 83.2 53 73.6
Glyma.12G135700 Glycine max HOM05D003993 ORTHO05D005336 1.2e-14 82.8 153 35.9
MD03G1211800 Malus domestica HOM05D003993 ORTHO05D005336 1.2e-14 82.8 50 76.0
MD11G1227200 Malus domestica HOM05D003993 ORTHO05D005336 1.2e-14 82.8 50 76.0
RcHm_v2.0_Chr5g0037331 Rosa chinensis HOM05D003993 ORTHO05D005336 1.2e-14 82.8 50 76.0
arahy.Tifrunner.gnm1.ann1.YETR49 Arachis hypogaea HOM05D003993 ORTHO05D005336 1.5e-14 82.4 152 36.8
Haze_09608 Corylus avellana HOM05D003993 ORTHO05D005336 1.5e-14 82.4 131 38.2
FAN16G1112 Fragaria x ananassa HOM05D003993 ORTHO05D005336 1.5e-14 82.4 50 74.0
FAN25G1663 Fragaria x ananassa HOM05D003993 ORTHO05D005336 1.5e-14 82.4 50 74.0
Lalb_Chr14g0366101 Lupinus albus HOM05D003993 ORTHO05D005336 1.5e-14 82.4 53 73.6
ATR0073G006 Amborella trichopoda HOM05D003993 ORTHO05D005336 2.0e-14 82.0 53 73.6
arahy.Tifrunner.gnm1.ann1.P0I1SB Arachis hypogaea HOM05D003993 ORTHO05D005336 2.0e-14 82.0 52 75.0
Prupe.4G202100 Prunus persica HOM05D003993 ORTHO05D005336 2.0e-14 82.0 50 74.0
Sabra11G0119600 Salix brachista HOM05D003993 ORTHO05D005336 2.0e-14 82.0 53 71.7
Lsat_1_v5_gn_7_108360 Lactuca sativa HOM05D003993 ORTHO05D005336 2.6e-14 81.6 53 73.6
TAR624G0674 Trochodendron aralioides HOM05D003993 ORTHO05D005336 2.6e-14 81.6 54 75.9
CsaV3_3G005470 Cucumis sativus L. HOM05D003993 ORTHO05D005336 3.4e-14 81.3 57 66.7
Glyma.13G287100 Glycine max HOM05D003993 ORTHO05D005336 3.4e-14 81.3 52 73.1
MBI18_g30688_MAGBIO Magnolia biondii HOM05D003993 ORTHO05D005336 3.4e-14 81.3 53 71.7
Nn1g06997 Nelumbo nucifera HOM05D003993 ORTHO05D005336 3.4e-14 81.3 53 73.6
Phvul.005G091400 Phaseolus vulgaris HOM05D003993 ORTHO05D005336 3.4e-14 81.3 52 73.1
SalBow7G3755 Salvia bowleyana HOM05D003993 ORTHO05D005336 3.4e-14 81.3 50 76.0
VMungo1080G1710 Vigna mungo HOM05D003993 ORTHO05D005336 3.4e-14 81.3 52 73.1
AL3G34640 Arabidopsis lyrata HOM05D003993 ORTHO05D005336 4.5e-14 80.9 53 69.8
AT3G20720 Arabidopsis thaliana HOM05D003993 ORTHO05D005336 4.5e-14 80.9 53 69.8
BcaB04g20636 Brassica carinata HOM05D003993 ORTHO05D005336 4.5e-14 80.9 53 69.8
BcaC09g49013 Brassica carinata HOM05D003993 ORTHO05D005336 4.5e-14 80.9 53 69.8
A01p34110 Brassica napus HOM05D003993 ORTHO05D005336 4.5e-14 80.9 53 69.8
C01p43520 Brassica napus HOM05D003993 ORTHO05D005336 4.5e-14 80.9 53 69.8
BolC1t04312H Brassica oleracea HOM05D003993 ORTHO05D005336 4.5e-14 80.9 53 69.8
BraA01t03515Z Brassica rapa HOM05D003993 ORTHO05D005336 4.5e-14 80.9 53 69.8
CSS0003157 Camellia sinensis var. sinensis HOM05D003993 ORTHO05D005336 4.5e-14 80.9 53 71.7
CSS0014856 Camellia sinensis var. sinensis HOM05D003993 ORTHO05D005336 4.5e-14 80.9 53 71.7
Carub.0003s2068 Capsella rubella HOM05D003993 ORTHO05D005336 4.5e-14 80.9 53 69.8
CARHR096540 Cardamine hirsuta HOM05D003993 ORTHO05D005336 4.5e-14 80.9 53 69.8
Thhalv10019934m.g Eutrema salsugineum HOM05D003993 ORTHO05D005336 4.5e-14 80.9 53 69.8
Gohir.D01G060900 Gossypium hirsutum HOM05D003993 ORTHO05D005336 4.5e-14 80.9 53 69.8
Phvul.011G140701 Phaseolus vulgaris HOM05D003993 ORTHO05D005336 4.5e-14 80.9 53 69.8
Sp3g18740 Schrenkiella parvula HOM05D003993 ORTHO05D005336 4.5e-14 80.9 53 69.8
THA.LOC104817894 Tarenaya hassleriana HOM05D003993 ORTHO05D005336 4.5e-14 80.9 50 74.0
ClCG10G005790 Citrullus lanatus HOM05D003993 ORTHO05D005336 5.9e-14 80.5 56 67.9
FvH4_3g21780 Fragaria vesca HOM05D003993 ORTHO05D005336 5.9e-14 80.5 50 72.0
FAN11G2565 Fragaria x ananassa HOM05D003993 ORTHO05D005336 5.9e-14 80.5 50 72.0
Solyc07g064080.4 Solanum lycopersicum HOM05D003993 ORTHO05D005336 5.9e-14 80.5 53 71.7
VMungo1127G0362 Vigna mungo HOM05D003993 ORTHO05D005336 5.9e-14 80.5 132 37.1
AUR62015640 Chenopodium quinoa HOM05D003993 ORTHO05D005336 7.7e-14 80.1 53 69.8
Actinidia09963 Actinidia chinensis HOM05D003993 ORTHO05D005336 1.0e-13 79.7 53 69.8
Ah.06g183050 Amaranthus hybridus HOM05D003993 ORTHO05D005336 1.0e-13 79.7 53 69.8
Aqoxy4G02086 Aquilegia oxysepala HOM05D003993 ORTHO05D005336 1.0e-13 79.7 50 74.0
A05p28100 Brassica napus HOM05D003993 ORTHO05D005336 1.0e-13 79.7 53 67.9
BraA05t21692Z Brassica rapa HOM05D003993 ORTHO05D005336 1.0e-13 79.7 53 67.9
Oeu032440.1 Olea europaea HOM05D003993 ORTHO05D005336 1.0e-13 79.7 50 74.0
Sopen07g032220 Solanum pennellii HOM05D003993 ORTHO05D005336 1.0e-13 79.7 149 36.2
Lj3g0011163 Lotus japonicus HOM05D003993 ORTHO05D005336 1.3e-13 79.3 53 69.8
SEGI_25073 Sequoiadendron giganteum HOM05D003993 ORTHO05D005336 1.3e-13 79.3 52 73.1
AagrBONN_evm.TU.Sc2ySwM_344.1679 Anthoceros agrestis HOM05D003993 ORTHO05D005336 1.7e-13 79.0 56 66.1
Glyma.12G214500 Glycine max HOM05D003993 ORTHO05D005336 1.7e-13 79.0 52 69.2
HPP92_011131 Vanilla planifolia HOM05D003993 ORTHO05D005336 1.7e-13 79.0 53 69.8
Ciclev10007272m.g Citrus clementina HOM05D003993 ORTHO05D005336 2.2e-13 78.6 51 70.6
Sc16g0006470 Simmondsia chinensis HOM05D003993 ORTHO05D005336 2.2e-13 78.6 50 70.0
Psat7g122440 Pisum sativum HOM05D003993 ORTHO05D005336 2.9e-13 78.2 50 70.0
EL10Ac4g07982 Beta vulgaris HOM05D003993 ORTHO05D005336 3.8e-13 77.8 53 66.0
Aa31LG8G7470 Aethionema arabicum HOM05D003993 ORTHO05D005336 1.1e-12 76.3 59 64.4
Atru.chr2.3206 Acer truncatum HOM05D003993 ORTHO05D005336 2.5e-12 75.1 53 67.9
CAN.G337.149 Capsicum annuum HOM05D003993 ORTHO05D005336 9.4e-12 73.2 150 35.3
Mapoly0007s0002 Marchantia polymorpha HOM05D003993 ORTHO05D005336 1.2e-11 72.8 51 64.7
HanXRQChr08g0234101 Helianthus annuus HOM05D003993 ORTHO05D005336 2.1e-11 72.0 50 66.0
SMO143G0035 Selaginella moellendorffii HOM05D003993 ORTHO05D005336 2.1e-11 72.0 49 71.4
Nn1g03663 Nelumbo nucifera HOM05D003993 ORTHO05D005336 2.7e-11 71.6 46 71.7
Lj8C165T11 Lonicera japonica HOM05D003993 ORTHO05D005336 3.6e-11 71.2 53 67.9
Nitab4.5_0000397g0110 Nicotiana tabacum HOM05D003993 ORTHO05D005336 4.6e-11 70.9 54 66.7
vmacro11768 Vaccinium macrocarpon HOM05D003993 ORTHO05D005336 4.6e-11 70.9 50 68.0
PSO541G2178 Papaver somniferum HOM05D003993 ORTHO05D005336 1.0e-10 69.7 46 69.6
Peaxi162Scf01086g00149 Petunia axillaris HOM05D003993 ORTHO05D005336 1.4e-10 69.3 50 66.0
Pp3c10_1850 Physcomitrium patens HOM05D003993 ORTHO05D005336 1.4e-10 69.3 52 61.5
Cc05_g13220 Coffea canephora HOM05D003993 ORTHO05D005336 1.8e-10 68.9 53 66.0
Nitab4.5_0009192g0040 Nicotiana tabacum HOM05D003993 ORTHO05D005336 1.8e-10 68.9 50 68.0
ECA246G2094 Erigeron canadensis HOM05D003993 ORTHO05D005336 2.3e-10 68.6 50 62.0
PSO675G0751 Papaver somniferum HOM05D003993 ORTHO05D005336 3.9e-10 67.8 46 67.4
DCAR_010016 Daucus carota HOM05D003993 ORTHO05D005336 4.3e-09 64.3 50 62.0
Cpa.g.sc97.71 Carica papaya HOM05D003993 ORTHO05D005336 5.7e-09 63.9 48 60.4
unitig_26.g9969 Utricularia gibba HOM05D003993 ORTHO05D005336 4.1e-07 57.8 68 47.1
Pp3c15_5100 Physcomitrium patens HOM05D003993 ORTHO05D005336 1.5e-06 55.8 53 45.3
TAR626G1606 Trochodendron aralioides HOM05D003993 ORTHO05D005336 5.9e-06 53.9 29 82.8


User provided reference genes

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