Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.42HTUN Arachis hypogaea HOM05D000117 ORTHO05D004016 2.8e-70 268.5 131 100.0
Lj1g0003344 Lotus japonicus HOM05D000117 ORTHO05D004016 3.0e-08 62.4 63 60.3
Glyma.06G067700 Glycine max HOM05D000117 ORTHO05D004016 6.7e-08 61.2 63 57.1
Glyma.04G066300 Glycine max HOM05D000117 ORTHO05D004016 2.5e-07 59.3 63 52.4
VMungo1309G1431 Vigna mungo HOM05D000117 ORTHO05D004016 3.3e-07 58.9 63 52.4
arahy.Tifrunner.gnm1.ann1.2A4XC9 Arachis hypogaea HOM05D000117 ORTHO05D004016 5.7e-07 58.2 50 62.0
Psat5g029240 Pisum sativum HOM05D000117 ORTHO05D004016 5.7e-07 58.2 57 54.4
Sabra18G0029400 Salix brachista HOM05D000117 ORTHO05D017707 9.7e-07 57.4 62 51.6
Cfa013139 Carpinus fangiana HOM05D000117 ORTHO05D004016 1.6e-06 56.6 68 47.1
Potri.006G255200 Populus trichocarpa HOM05D000117 ORTHO05D004016 1.6e-06 56.6 99 42.4
Prupe.1G481700 Prunus persica HOM05D000117 ORTHO05D004016 1.6e-06 56.6 31 74.2
CiPaw.07G223700 Carya illinoinensis HOM05D000117 ORTHO05D004016 2.2e-06 56.2 67 43.3
Lj3g0016907 Lotus japonicus HOM05D004813 ORTHO05D005889 2.2e-06 56.2 93 43.0
LjContig00485g0025035 Lotus japonicus HOM05D000117 ORTHO05D004016 3.7e-06 55.5 93 43.0
TPR.G3144 Trifolium pratense HOM05D000117 ORTHO05D004016 3.7e-06 55.5 70 50.0
Sabra06G0199500 Salix brachista HOM05D000117 ORTHO05D004016 6.3e-06 54.7 68 45.6
Medtr3g106850 Medicago truncatula HOM05D000117 ORTHO05D004016 8.2e-06 54.3 69 49.3


User provided reference genes

Program Settings