Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.41BJXF Arachis hypogaea HOM05D005785 ORTHO05D007962 8.4e-55 216.9 116 100.0
arahy.Tifrunner.gnm1.ann1.IG85PU Arachis hypogaea HOM05D005785 ORTHO05D007962 2.0e-48 195.7 112 92.9
arahy.Tifrunner.gnm1.ann1.WWU0A6 Arachis hypogaea HOM05D005785 ORTHO05D007962 1.0e-47 193.4 112 92.9
arahy.Tifrunner.gnm1.ann1.DDX2YA Arachis hypogaea HOM05D005785 ORTHO05D007962 3.8e-47 191.4 112 91.1
arahy.Tifrunner.gnm1.ann1.D5Y0EF Arachis hypogaea HOM05D005785 ORTHO05D007962 8.5e-47 190.3 112 92.0
arahy.Tifrunner.gnm1.ann1.T05FEK Arachis hypogaea HOM05D005785 ORTHO05D007962 2.1e-37 159.1 91 92.3
Ca_20841_v3 Cicer arietinum L. HOM05D005785 ORTHO05D007962 2.1e-29 132.5 91 75.8
TPR.G28051 Trifolium pratense HOM05D005785 ORTHO05D007962 2.1e-29 132.5 97 74.2
arahy.Tifrunner.gnm1.ann1.V0VBM3 Arachis hypogaea HOM05D005785 ORTHO05D007962 4.7e-29 131.3 73 93.2
Medtr4g068970 Medicago truncatula HOM05D005785 ORTHO05D007962 8.0e-29 130.6 89 77.5
Phvul.011G048000 Phaseolus vulgaris HOM05D005785 ORTHO05D007962 1.4e-28 129.8 89 77.5
Psat7g185400 Pisum sativum HOM05D005785 ORTHO05D007962 1.4e-28 129.8 94 71.3
Glyma.12G046200 Glycine max HOM05D005785 ORTHO05D007962 2.3e-28 129.0 89 76.4
Lj3g0001588 Lotus japonicus HOM05D005785 ORTHO05D007962 2.3e-28 129.0 91 71.4
Lalb_Chr03g0025851 Lupinus albus HOM05D005785 ORTHO05D007962 4.4e-27 124.8 89 76.4
VMungo1127G1831 Vigna mungo HOM05D005785 ORTHO05D007962 4.4e-27 124.8 76 82.9
Glyma.12G046132 Glycine max HOM05D005785 ORTHO05D007962 5.7e-27 124.4 91 72.5
Glyma.11G121100 Glycine max HOM05D005785 ORTHO05D007962 2.2e-26 122.5 91 69.2
QL11p040109 Quercus lobata HOM05D005785 ORTHO05D007962 8.2e-26 120.6 87 74.7
FvH4_2g07870 Fragaria vesca HOM05D005785 ORTHO05D007962 1.8e-25 119.4 92 73.9
FAN20G1723 Fragaria x ananassa HOM05D005785 ORTHO05D007962 2.4e-25 119.0 92 73.9
FAN24G2550 Fragaria x ananassa HOM05D005785 ORTHO05D007962 9.1e-25 117.1 92 72.8
Gohir.A03G180301 Gossypium hirsutum HOM05D005785 ORTHO05D007962 9.1e-25 117.1 90 70.0
Gohir.D02G203047 Gossypium hirsutum HOM05D005785 ORTHO05D007962 9.1e-25 117.1 90 70.0
CiPaw.06G138100 Carya illinoinensis HOM05D005785 ORTHO05D007962 1.2e-24 116.7 86 72.1
COL.COLO4_32470 Corchorus olitorius HOM05D005785 ORTHO05D007962 1.2e-24 116.7 90 72.2
Thecc.02G121200 Theobroma cacao HOM05D005785 ORTHO05D007962 1.6e-24 116.3 90 72.2
Gorai.005G229200 Gossypium raimondii HOM05D005785 ORTHO05D007962 2.6e-24 115.5 90 68.9
arahy.Tifrunner.gnm1.ann1.6T7UPN Arachis hypogaea HOM05D003636 ORTHO05D005832 3.5e-24 115.2 71 85.9
AT3G18890 Arabidopsis thaliana HOM05D005785 ORTHO05D007962 1.0e-23 113.6 88 68.2
RcHm_v2.0_Chr6g0262291 Rosa chinensis HOM05D005785 ORTHO05D007962 1.0e-23 113.6 92 71.7
FAN15G0249 Fragaria x ananassa HOM05D005785 ORTHO05D007962 1.3e-23 113.2 92 71.7
FAN27G0274 Fragaria x ananassa HOM05D005785 ORTHO05D007962 1.3e-23 113.2 76 78.9
THA.LOC104800353 Tarenaya hassleriana HOM05D005785 ORTHO05D007962 1.3e-23 113.2 87 64.4
Haze_02424 Corylus avellana HOM05D005785 ORTHO05D007962 1.7e-23 112.8 87 72.4
Peaxi162Scf00003g01433 Petunia axillaris HOM05D005785 ORTHO05D007962 1.7e-23 112.8 75 76.0
MD10G1083200 Malus domestica HOM05D005785 ORTHO05D007962 2.2e-23 112.5 89 69.7
PGR042G3650 Punica granatum HOM05D005785 ORTHO05D007962 2.9e-23 112.1 86 70.9
Ciclev10028081m.g Citrus clementina HOM05D005785 ORTHO05D007962 3.8e-23 111.7 91 69.2
Potri.009G111323 Populus trichocarpa HOM05D005785 ORTHO05D007962 3.8e-23 111.7 87 70.1
Potri.T124404 Populus trichocarpa HOM05D005785 ORTHO05D007962 3.8e-23 111.7 87 70.1
Cpa.g.sc62.103 Carica papaya HOM05D005785 ORTHO05D007962 6.5e-23 110.9 91 65.9
Carub.0003s1872 Capsella rubella HOM05D005785 ORTHO05D007962 8.5e-23 110.5 88 68.2
Eucgr.G00478 Eucalyptus grandis HOM05D005785 ORTHO05D007962 8.5e-23 110.5 96 63.5
Dinv23561 Davidia involucrata HOM05D005785 ORTHO05D007962 1.1e-22 110.2 93 64.5
TAR628G1306 Trochodendron aralioides HOM05D005785 ORTHO05D007962 1.1e-22 110.2 93 64.5
Aa31LG8G5730 Aethionema arabicum HOM05D005785 ORTHO05D007962 1.5e-22 109.8 88 67.0
AL3G32280 Arabidopsis lyrata HOM05D005785 ORTHO05D007962 1.5e-22 109.8 88 67.0
Thhalv10020309m.g Eutrema salsugineum HOM05D005785 ORTHO05D007962 1.5e-22 109.8 89 66.3
Sopen10g022810 Solanum pennellii HOM05D005785 ORTHO05D007962 3.2e-22 108.6 86 69.8
Solyc10g051110.1 Solanum lycopersicum HOM05D005785 ORTHO05D007962 4.2e-22 108.2 75 74.7
TWI79G0480 Tripterygium wilfordii HOM05D005785 ORTHO05D007962 5.5e-22 107.8 91 64.8
PGSC0003DMG400008269 Solanum tuberosum HOM05D005785 ORTHO05D007962 7.2e-22 107.5 75 73.3
C05p46540 Brassica napus HOM05D005785 ORTHO05D007962 9.4e-22 107.1 75 73.3
BolC5t33383H Brassica oleracea HOM05D005785 ORTHO05D007962 9.4e-22 107.1 75 73.3
BraA05t21908Z Brassica rapa HOM05D005785 ORTHO05D007962 9.4e-22 107.1 75 73.3
DCAR_022090 Daucus carota HOM05D005785 ORTHO05D009166 9.4e-22 107.1 93 61.3
Migut.B00273 Erythranthe guttata HOM05D005785 ORTHO05D007962 9.4e-22 107.1 81 69.1
Nitab4.5_0012694g0010 Nicotiana tabacum HOM05D005785 ORTHO05D007962 1.6e-21 106.3 75 72.0
BcaB06g25943 Brassica carinata HOM05D005785 ORTHO05D007962 2.1e-21 105.9 86 66.3
A05p30660 Brassica napus HOM05D005785 ORTHO05D007962 2.1e-21 105.9 89 66.3
CARHR094330 Cardamine hirsuta HOM05D005785 ORTHO05D007962 2.1e-21 105.9 87 66.7
arahy.Tifrunner.gnm1.ann1.W4KKVA Arachis hypogaea HOM05D005785 ORTHO05D007962 3.6e-21 105.1 112 57.1
CANSAT80G1909 Cannabis sativa HOM05D005785 ORTHO05D007962 3.6e-21 105.1 87 66.7
Cc02_g17970 Coffea canephora HOM05D005785 ORTHO05D007962 3.6e-21 105.1 76 72.4
Nitab4.5_0001361g0190 Nicotiana tabacum HOM05D005785 ORTHO05D007962 3.6e-21 105.1 75 72.0
Rhsim11G0172800 Rhododendron simsii HOM05D005785 ORTHO05D007962 3.6e-21 105.1 93 60.2
Sabra09G0085100 Salix brachista HOM05D005785 ORTHO05D007962 3.6e-21 105.1 87 67.8
Lsat_1_v5_gn_7_89860 Lactuca sativa HOM05D005785 ORTHO05D007962 4.7e-21 104.8 86 64.0
GSVIVG01031907001 Vitis vinifera HOM05D005785 ORTHO05D007962 4.7e-21 104.8 95 64.2
Sp3g16990 Schrenkiella parvula HOM05D005785 ORTHO05D007962 6.1e-21 104.4 88 64.8
Atru.chr5.2923 Acer truncatum HOM05D005785 ORTHO05D007962 8.0e-21 104.0 91 62.6
Duzib132G1036 Durio zibethinus HOM05D005785 ORTHO05D007962 8.0e-21 104.0 90 65.6
vmacro02148 Vaccinium macrocarpon HOM05D005785 ORTHO05D007962 8.0e-21 104.0 93 60.2
CSS0035207 Camellia sinensis var. sinensis HOM05D005785 ORTHO05D007962 1.0e-20 103.6 86 65.1
Sc14g0001770 Simmondsia chinensis HOM05D005785 ORTHO05D007962 1.0e-20 103.6 86 65.1
Actinidia00495 Actinidia chinensis HOM05D005785 ORTHO05D007962 1.4e-20 103.2 91 60.4
SalBow6G0785 Salvia bowleyana HOM05D005785 ORTHO05D007962 1.4e-20 103.2 93 61.3
CAN.G1.48 Capsicum annuum HOM05D005785 ORTHO05D007962 2.3e-20 102.4 75 70.7
Hma1.2p1_1353F.1_g277650 Hydrangea macrophylla HOM05D005785 ORTHO05D007962 2.3e-20 102.4 66 78.8
Hma1.2p1_2724F.1_g327500 Hydrangea macrophylla HOM05D005785 ORTHO05D007962 2.3e-20 102.4 66 78.8
Hma1.2p1_2724F.1_g327510 Hydrangea macrophylla HOM05D005785 ORTHO05D007962 2.3e-20 102.4 66 78.8
Potri.004G150300 Populus trichocarpa HOM05D005785 ORTHO05D007962 4.0e-20 101.7 76 69.7
Manes.15G147600 Manihot esculenta HOM05D005785 ORTHO05D007962 5.2e-20 101.3 77 70.1
HanXRQChr16g0505051 Helianthus annuus HOM05D005785 ORTHO05D007962 6.8e-20 100.9 73 71.2
MSTRG.5387 Avicennia marina HOM05D005785 ORTHO05D007962 8.8e-20 100.5 81 70.4
CSS0030803 Camellia sinensis var. sinensis HOM05D005785 ORTHO05D007962 8.8e-20 100.5 86 64.0
ECA236G5032 Erigeron canadensis HOM05D005785 ORTHO05D007962 1.2e-19 100.1 74 70.3
EL10Ac9g21765 Beta vulgaris HOM05D005785 ORTHO05D007962 2.0e-19 99.4 73 69.9
MBI16_g10972_MAGBIO Magnolia biondii HOM05D005785 ORTHO05D007962 2.0e-19 99.4 87 63.2
AUR62016697 Chenopodium quinoa HOM05D005785 ORTHO05D007962 2.6e-19 99.0 93 58.1
PSO675G5886 Papaver somniferum HOM05D005785 ORTHO05D007962 2.6e-19 99.0 88 62.5
PSO541G4825 Papaver somniferum HOM05D005785 ORTHO05D007962 3.4e-19 98.6 88 63.6
Ah.01g006150 Amaranthus hybridus HOM05D005785 ORTHO05D007962 4.4e-19 98.2 96 59.4
Nn5g29471 Nelumbo nucifera HOM05D005785 ORTHO05D007962 4.4e-19 98.2 89 60.7
AUR62011364 Chenopodium quinoa HOM05D005785 ORTHO05D007962 5.7e-19 97.8 93 57.0
Prupe.8G106300 Prunus persica HOM05D005785 ORTHO05D007962 5.7e-19 97.8 89 61.8
AUR62011362 Chenopodium quinoa HOM05D000048 ORTHO05D000445 1.3e-18 96.7 81 63.0
arahy.Tifrunner.gnm1.ann1.64QJ3Y Arachis hypogaea HOM05D005785 ORTHO05D007962 2.8e-18 95.5 53 94.3
MELO3C018409.2 Cucumis melo HOM05D005785 ORTHO05D007962 2.8e-18 95.5 91 59.3
Nn5g31359 Nelumbo nucifera HOM05D005785 ORTHO05D007962 2.8e-18 95.5 83 62.7
CsaV3_7G010200 Cucumis sativus L. HOM05D005785 ORTHO05D007962 6.3e-18 94.4 91 57.1
Aqoxy6G00992 Aquilegia oxysepala HOM05D005785 ORTHO05D007962 8.3e-18 94.0 93 61.3
Sed0026918 Sechium edule HOM05D005785 ORTHO05D007962 1.1e-17 93.6 68 70.6
Lj6g0019018 Lotus japonicus HOM05D005785 ORTHO05D007962 3.1e-17 92.0 67 68.7
unitig_0.g71 Utricularia gibba HOM05D005785 ORTHO05D007962 4.5e-16 88.2 65 67.7
ATR0733G035 Amborella trichopoda HOM05D005785 ORTHO05D007962 8.5e-15 84.0 65 66.2
Psat6g044560 Pisum sativum HOM05D005785 ORTHO05D007962 8.5e-15 84.0 67 64.2
arahy.Tifrunner.gnm1.ann1.FX1CEN Arachis hypogaea HOM05D005785 ORTHO05D007962 1.1e-14 83.6 44 93.2
Os10g0100300 Oryza sativa ssp. japonica HOM05D005785 ORTHO05D007962 4.2e-14 81.6 88 52.3
SEGI_40956 Sequoiadendron giganteum HOM05D005785 ORTHO05D007962 5.5e-14 81.3 88 52.3
Actinidia12988 Actinidia chinensis HOM05D005785 ORTHO05D007962 7.2e-14 80.9 75 61.3
Mapoly0002s0130 Marchantia polymorpha HOM05D005785 ORTHO05D007962 9.4e-14 80.5 87 55.2
Zm00001eb118450 Zea mays HOM05D005785 ORTHO05D007962 1.2e-13 80.1 66 63.6
SMO146G0207 Selaginella moellendorffii HOM05D005785 ORTHO05D007962 8.8e-12 73.9 87 50.6
CBR_g23490 Chara braunii HOM05D000019 ORTHO05D000048 2.6e-11 72.4 62 58.1
Pp3c10_3330 Physcomitrium patens HOM05D005785 ORTHO05D000513 9.8e-11 70.5 66 54.5
Hund06147 Selenicereus undatus HOM05D005785 ORTHO05D007962 9.8e-11 70.5 73 54.8
ClCG02G005360 Citrullus lanatus HOM05D005785 ORTHO05D009166 4.1e-09 65.1 74 50.0
Cre06.g269050 Chlamydomonas reinhardtii HOM05D005785 ORTHO05D007962 1.2e-08 63.5 80 46.2
Hund06152 Selenicereus undatus HOM05D005785 ORTHO05D007962 4.5e-08 61.6 48 64.6


User provided reference genes

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