Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.3Y20MY Arachis hypogaea HOM05D006824 ORTHO05D008779 4.3e-150 534.6 270 100.0
arahy.Tifrunner.gnm1.ann1.8HY0WZ Arachis hypogaea HOM05D006824 ORTHO05D008779 2.6e-147 525.4 270 98.9
Glyma.09G252100 Glycine max HOM05D006824 ORTHO05D008779 1.7e-98 363.2 243 74.1
Ca_07965_v3 Cicer arietinum L. HOM05D006824 ORTHO05D008779 4.9e-98 361.7 236 74.6
Phvul.008G055700 Phaseolus vulgaris HOM05D006824 ORTHO05D008779 1.4e-97 360.1 218 78.4
VMungo1383G3541 Vigna mungo HOM05D006824 ORTHO05D008779 1.4e-97 360.1 218 78.0
Glyma.18G240500 Glycine max HOM05D006824 ORTHO05D008779 2.5e-97 359.4 218 78.9
TPR.G28449 Trifolium pratense HOM05D006824 ORTHO05D008779 4.2e-97 358.6 218 78.0
Psat3g104840 Pisum sativum HOM05D006824 ORTHO05D008779 1.2e-96 357.1 223 74.9
Lalb_Chr19g0126751 Lupinus albus HOM05D006824 ORTHO05D008779 4.6e-96 355.1 198 83.8
Medtr7g079530 Medicago truncatula HOM05D006824 ORTHO05D008779 2.3e-95 352.8 258 67.8
RcHm_v2.0_Chr3g0448181 Rosa chinensis HOM05D006824 ORTHO05D008779 2.5e-89 332.8 198 76.8
FAN05G0802 Fragaria x ananassa HOM05D006824 ORTHO05D008779 7.9e-88 327.8 192 77.6
CsaV3_2G009540 Cucumis sativus L. HOM05D006824 ORTHO05D008779 3.9e-87 325.5 198 74.2
Atru.chr12.2132 Acer truncatum HOM05D006824 ORTHO05D008779 1.5e-86 323.6 228 66.2
ClCG11G010940 Citrullus lanatus HOM05D006824 ORTHO05D008779 2.5e-86 322.8 198 72.2
CSS0012922 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 5.7e-86 321.6 201 71.1
CSS0029100 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 5.7e-86 321.6 201 71.1
Haze_04530 Corylus avellana HOM05D006824 ORTHO05D008779 7.4e-86 321.2 202 71.8
Dinv04348 Davidia involucrata HOM05D006824 ORTHO05D008779 7.4e-86 321.2 207 69.6
CANSAT54G2581 Cannabis sativa HOM05D006824 ORTHO05D008779 1.3e-85 320.5 206 69.4
Thecc.05G206500 Theobroma cacao HOM05D006824 ORTHO05D008779 3.7e-85 318.9 203 70.4
Gorai.003G050700 Gossypium raimondii HOM05D006824 ORTHO05D008779 6.3e-85 318.2 222 66.7
MD12G1258900 Malus domestica HOM05D006824 ORTHO05D008779 1.1e-84 317.4 196 73.0
GSVIVG01019144001 Vitis vinifera HOM05D006824 ORTHO05D008779 1.8e-84 316.6 195 73.3
Duzib128G1599 Durio zibethinus HOM05D006824 ORTHO05D008779 2.4e-84 316.2 200 70.0
Prupe.6G359400 Prunus persica HOM05D006824 ORTHO05D008779 2.4e-84 316.2 198 73.2
Lj8A196G47 Lonicera japonica HOM05D006824 ORTHO05D008779 4.1e-84 315.5 202 70.8
Actinidia38928 Actinidia chinensis HOM05D006824 ORTHO05D008779 6.9e-84 314.7 198 71.2
Gohir.A02G138800 Gossypium hirsutum HOM05D006824 ORTHO05D008779 6.9e-84 314.7 205 69.3
PGSC0003DMG400023472 Solanum tuberosum HOM05D006824 ORTHO05D008779 6.9e-84 314.7 228 63.6
Oeu010150.1 Olea europaea HOM05D006824 ORTHO05D008779 1.2e-83 313.9 219 66.2
Potri.010G143000 Populus trichocarpa HOM05D006824 ORTHO05D008779 1.5e-83 313.5 203 69.5
Cc09_g03430 Coffea canephora HOM05D006824 ORTHO05D008779 2.0e-83 313.2 236 61.4
HanXRQChr11g0323941 Helianthus annuus HOM05D006824 ORTHO05D008779 2.0e-83 313.2 214 67.8
Sed0011929 Sechium edule HOM05D006824 ORTHO05D008779 2.6e-83 312.8 198 70.7
CAN.G694.18 Capsicum annuum HOM05D006824 ORTHO05D008779 4.5e-83 312.0 230 63.0
Nitab4.5_0005183g0030 Nicotiana tabacum HOM05D006824 ORTHO05D008779 1.7e-82 310.1 225 63.6
Sopen05g034220 Solanum pennellii HOM05D006824 ORTHO05D008779 1.7e-82 310.1 220 66.4
FAN02G3690 Fragaria x ananassa HOM05D006824 ORTHO05D008779 2.9e-82 309.3 198 72.7
DCAR_005505 Daucus carota HOM05D006824 ORTHO05D008779 3.8e-82 308.9 221 63.3
Lj1g0017863 Lotus japonicus HOM05D006824 ORTHO05D008779 3.8e-82 308.9 226 70.4
ECA232G2571 Erigeron canadensis HOM05D006824 ORTHO05D008779 5.0e-82 308.5 217 66.4
PGR031G0982 Punica granatum HOM05D006824 ORTHO05D008779 5.0e-82 308.5 246 60.6
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 8.5e-82 307.8 198 70.7
Manes.14G158930 Manihot esculenta HOM05D006824 ORTHO05D008779 8.5e-82 307.8 198 68.7
Sabra10G0110900 Salix brachista HOM05D006824 ORTHO05D008779 8.5e-82 307.8 213 67.1
CiPaw.08G117600 Carya illinoinensis HOM05D006824 ORTHO05D008779 1.1e-81 307.4 202 67.8
Rhsim03G0265800 Rhododendron simsii HOM05D006824 ORTHO05D008779 2.5e-81 306.2 214 63.6
TWI14G0776 Tripterygium wilfordii HOM05D006824 ORTHO05D008779 2.5e-81 306.2 215 67.0
Eucgr.H01379 Eucalyptus grandis HOM05D006824 ORTHO05D008779 4.2e-81 305.4 213 64.8
vmacro06000 Vaccinium macrocarpon HOM05D006824 ORTHO05D008779 5.5e-81 305.1 205 66.3
Lsat_1_v5_gn_9_48761 Lactuca sativa HOM05D006824 ORTHO05D008779 7.2e-81 304.7 211 65.9
TAR362G0347 Trochodendron aralioides HOM05D006824 ORTHO05D008779 7.2e-81 304.7 221 64.7
FAN14G1847 Fragaria x ananassa HOM05D006824 ORTHO05D008779 9.4e-81 304.3 187 74.9
EL10Ac4g09985 Beta vulgaris HOM05D006824 ORTHO05D008779 1.2e-80 303.9 244 60.2
AUR62006674 Chenopodium quinoa HOM05D006824 ORTHO05D008779 1.2e-80 303.9 200 69.0
AUR62000332 Chenopodium quinoa HOM05D006824 ORTHO05D008779 2.1e-80 303.1 241 60.2
SGA_v2.0_scaffold13G06472 Striga asiatica HOM05D006824 ORTHO05D008779 1.1e-78 297.4 247 57.9
A07p26320 Brassica napus HOM05D006824 ORTHO05D008779 5.7e-78 295.0 198 63.6
BraA07t30276Z Brassica rapa HOM05D006824 ORTHO05D008779 5.7e-78 295.0 198 64.1
Aqoxy5G00154 Aquilegia oxysepala HOM05D006824 ORTHO05D008779 1.7e-77 293.5 224 60.7
PSO170G6807 Papaver somniferum HOM05D006824 ORTHO05D008779 2.2e-77 293.1 202 64.4
THA.LOC104813550 Tarenaya hassleriana HOM05D006824 ORTHO05D008779 3.7e-77 292.4 198 63.6
C06p28710 Brassica napus HOM05D006824 ORTHO05D008779 1.1e-76 290.8 198 63.6
Thhalv10019052m.g Eutrema salsugineum HOM05D006824 ORTHO05D008779 1.1e-76 290.8 198 65.7
CDE09G0666 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 9.1e-76 287.7 200 67.0
Sp5g35980 Schrenkiella parvula HOM05D006824 ORTHO05D008779 9.1e-76 287.7 198 63.1
CARHR049030 Cardamine hirsuta HOM05D006824 ORTHO05D008779 2.0e-75 286.6 197 66.0
Aa31LG4G40 Aethionema arabicum HOM05D006824 ORTHO05D008779 3.4e-75 285.8 203 63.5
AL2G41760 Arabidopsis lyrata HOM05D006824 ORTHO05D008779 4.5e-75 285.4 199 64.3
SalBow3G1586 Salvia bowleyana HOM05D006824 ORTHO05D008779 1.0e-74 284.3 229 58.5
CDE02G0053 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 1.7e-74 283.5 210 65.2
Carub.0002s2772 Capsella rubella HOM05D006824 ORTHO05D008779 2.2e-74 283.1 199 64.8
BolC6t38040H Brassica oleracea HOM05D006824 ORTHO05D008779 3.8e-74 282.3 221 57.9
MELO3C008753.2 Cucumis melo HOM05D006824 ORTHO05D008779 1.2e-72 277.3 181 70.7
Migut.F01795 Erythranthe guttata HOM05D006824 ORTHO05D008779 1.2e-72 277.3 220 59.1
MELO3C025302.2 Cucumis melo HOM05D006824 ORTHO05D008779 2.7e-72 276.2 160 75.6
Ciclev10012732m.g Citrus clementina HOM05D006824 ORTHO05D008779 7.9e-72 274.6 176 70.5
AT1G79790 Arabidopsis thaliana HOM05D006824 ORTHO05D008779 1.4e-71 273.9 224 57.6
HPP92_009935 Vanilla planifolia HOM05D006824 ORTHO05D008779 3.0e-71 272.7 172 69.8
Cpa.g.sc123.9 Carica papaya HOM05D006824 ORTHO05D008779 2.8e-69 266.2 177 70.1
Nn1g09799 Nelumbo nucifera HOM05D006824 ORTHO05D008779 2.8e-69 266.2 172 68.6
SMO361G0474 Selaginella moellendorffii HOM05D006824 ORTHO05D008779 4.1e-68 262.3 189 61.4
Ah.06g195550 Amaranthus hybridus HOM05D006824 ORTHO05D008779 2.6e-67 259.6 212 60.4
Pp3c3_9990 Physcomitrium patens HOM05D006824 ORTHO05D008779 1.3e-66 257.3 194 59.3
MBI08_g02107_MAGBIO Magnolia biondii HOM05D006824 ORTHO05D008779 4.2e-65 252.3 168 66.1
CBR_g54655 Chara braunii HOM05D006824 ORTHO05D008779 9.7e-62 241.1 194 57.2
Hma1.2p1_0171F.1_g075760 Hydrangea macrophylla HOM05D006824 ORTHO05D008779 3.7e-61 239.2 134 79.1
Mapoly0002s0020 Marchantia polymorpha HOM05D006824 ORTHO05D008779 8.2e-61 238.0 193 54.4
FvH4_6g00710 Fragaria vesca HOM05D006824 ORTHO05D008779 3.1e-60 236.1 132 80.3
AagrBONN_evm.TU.Sc2ySwM_344.3559 Anthoceros agrestis HOM05D006824 ORTHO05D008779 3.5e-59 232.6 193 54.9
Gohir.D03G049300 Gossypium hirsutum HOM05D006824 ORTHO05D008779 1.0e-58 231.1 158 68.4
Nitab4.5_0009285g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 2.2e-58 229.9 160 66.2
Zm00001eb169290 Zea mays HOM05D006824 ORTHO05D008779 9.4e-57 224.6 154 68.2
arahy.Tifrunner.gnm1.ann1.EIZA4A Arachis hypogaea HOM05D006824 ORTHO05D008779 4.7e-56 222.2 104 98.1
SalBow3G1143 Salvia bowleyana HOM05D006824 ORTHO05D008779 1.4e-55 220.7 166 61.4
arahy.Tifrunner.gnm1.ann1.JEI8NT Arachis hypogaea HOM05D006824 ORTHO05D008779 2.0e-51 206.8 145 71.7
Cre13.g563200 Chlamydomonas reinhardtii HOM05D006824 ORTHO05D008779 1.0e-47 194.5 197 49.7
QL01p046721 Quercus lobata HOM05D006824 ORTHO05D008779 1.7e-45 187.2 124 67.7
MD04G1242100 Malus domestica HOM05D006824 ORTHO05D008779 3.5e-43 179.5 107 74.8
Nitab4.5_0008294g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 4.2e-41 172.6 220 44.1
PRCOL_00006210 Prasinoderma coloniale HOM05D006824 ORTHO05D008779 1.6e-40 170.6 187 44.4
Hund07329 Selenicereus undatus HOM05D006824 ORTHO05D008779 3.4e-38 162.9 218 39.0
FAN09G4644 Fragaria x ananassa HOM05D006824 ORTHO05D008779 8.9e-31 138.3 81 76.5
Solyc05g055820.3 Solanum lycopersicum HOM05D006824 ORTHO05D008779 1.9e-28 130.6 90 60.0
arahy.Tifrunner.gnm1.ann1.X7EDXL Arachis hypogaea HOM05D006824 ORTHO05D021501 1.8e-23 114.0 55 96.4
CARHR074720 Cardamine hirsuta HOM05D006824 ORTHO05D008779 4.4e-22 109.4 88 52.3
Psat3g104160 Pisum sativum HOM05D006824 ORTHO05D008779 2.1e-19 100.5 60 75.0
arahy.Tifrunner.gnm1.ann1.0X0W56 Arachis hypogaea HOM05D006824 ORTHO05D021501 2.3e-18 97.1 92 58.7
arahy.Tifrunner.gnm1.ann1.2JVF5K Arachis hypogaea HOM05D001175 ORTHO05D021501 2.3e-18 97.1 92 58.7
arahy.Tifrunner.gnm1.ann1.96LZZJ Arachis hypogaea HOM05D006824 ORTHO05D021501 2.3e-18 97.1 92 58.7
arahy.Tifrunner.gnm1.ann1.DM3ST4 Arachis hypogaea HOM05D006824 ORTHO05D021501 2.3e-18 97.1 92 58.7
arahy.Tifrunner.gnm1.ann1.LN2II4 Arachis hypogaea HOM05D006661 ORTHO05D021501 6.6e-18 95.5 91 58.2
MD04G1242000 Malus domestica HOM05D006824 ORTHO05D008779 1.5e-17 94.4 65 64.6
ATR0824G111 Amborella trichopoda HOM05D006824 ORTHO05D008779 2.8e-16 90.1 52 75.0
SEGI_14412 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 2.8e-16 90.1 56 69.6
ATR0263G001 Amborella trichopoda HOM05D006824 ORTHO05D008779 1.2e-14 84.7 68 52.9
FAN09G1422 Fragaria x ananassa HOM05D001170 ORTHO05D002759 9.9e-14 81.6 54 66.7
arahy.Tifrunner.gnm1.ann1.LK4K8I Arachis hypogaea HOM05D006688 ORTHO05D008550 1.5e-09 67.8 34 88.2
SEGI_33071 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 9.6e-09 65.1 65 44.6


User provided reference genes

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