Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.3W98EY Arachis hypogaea HOM05D007878 ORTHO05D010022 1.1e-238 829.7 461 100.0
arahy.Tifrunner.gnm1.ann1.QT4JJ4 Arachis hypogaea HOM05D007878 ORTHO05D010022 1.8e-193 679.5 398 96.5
Phvul.003G187300 Phaseolus vulgaris HOM05D007878 ORTHO05D010022 8.4e-106 388.3 530 51.7
Glyma.17G103300 Glycine max HOM05D007878 ORTHO05D010022 4.2e-97 359.4 513 51.3
Medtr4g109150 Medicago truncatula HOM05D007878 ORTHO05D010022 3.9e-95 352.8 505 50.5
Lj4g0012809 Lotus japonicus HOM05D007878 ORTHO05D010022 8.2e-93 345.1 497 50.3
Ca_21797_v3 Cicer arietinum L. HOM05D007878 ORTHO05D010022 1.5e-91 340.9 451 51.7
TPR.G1999 Trifolium pratense HOM05D007878 ORTHO05D010022 2.9e-74 283.5 502 45.2
Psat4g049000 Pisum sativum HOM05D007878 ORTHO05D010022 5.9e-67 259.2 474 42.4
Atru.chr9.783 Acer truncatum HOM05D007878 ORTHO05D010022 2.9e-58 230.3 520 37.9
FAN08G0929 Fragaria x ananassa HOM05D007878 ORTHO05D010022 5.2e-55 219.5 580 35.2
Duzib084G0698 Durio zibethinus HOM05D007878 ORTHO05D010022 3.4e-54 216.9 596 33.7
FAN18G1316 Fragaria x ananassa HOM05D007878 ORTHO05D010022 5.7e-54 216.1 607 34.9
Cfa019282 Carpinus fangiana HOM05D007878 ORTHO05D010022 9.8e-54 215.3 512 36.3
FAN13G2185 Fragaria x ananassa HOM05D007878 ORTHO05D010022 3.1e-52 210.3 607 33.8
RcHm_v2.0_Chr7g0182231 Rosa chinensis HOM05D007878 ORTHO05D010022 4.1e-52 209.9 609 35.0
Ciclev10024608m.g Citrus clementina HOM05D007878 ORTHO05D010022 6.5e-50 202.6 519 35.1
Thecc.03G095300 Theobroma cacao HOM05D007878 ORTHO05D010022 6.5e-50 202.6 592 32.9
Gohir.A03G068300 Gossypium hirsutum HOM05D007878 ORTHO05D010022 8.6e-50 202.2 490 34.7
Actinidia04859 Actinidia chinensis HOM05D007878 ORTHO05D010022 1.9e-49 201.1 572 34.4
Prupe.5G199300 Prunus persica HOM05D007878 ORTHO05D010022 1.2e-48 198.4 615 33.2
Gohir.D03G094900 Gossypium hirsutum HOM05D007878 ORTHO05D010022 2.1e-48 197.6 490 34.7
Dinv38757 Davidia involucrata HOM05D007878 ORTHO05D010022 4.7e-48 196.4 591 33.7
Cc04_g14870 Coffea canephora HOM05D007878 ORTHO05D010022 1.4e-47 194.9 548 34.5
ClCG06G015920 Citrullus lanatus HOM05D007878 ORTHO05D010022 4.0e-47 193.4 516 36.4
FvH4_5g14430 Fragaria vesca HOM05D007878 ORTHO05D010022 4.0e-47 193.4 606 33.3
Potri.015G061500 Populus trichocarpa HOM05D007878 ORTHO05D010022 2.0e-46 191.0 559 33.1
CANSAT80G1712 Cannabis sativa HOM05D007878 ORTHO05D010022 7.5e-46 189.1 526 34.8
MELO3C017199.2 Cucumis melo HOM05D007878 ORTHO05D010022 7.5e-46 189.1 508 35.0
COL.COLO4_38427 Corchorus olitorius HOM05D007878 ORTHO05D010022 1.3e-45 188.3 586 31.7
Nitab4.5_0002756g0040 Nicotiana tabacum HOM05D007878 ORTHO05D010022 6.3e-45 186.0 560 31.6
CAN.G479.49 Capsicum annuum HOM05D007878 ORTHO05D010022 8.3e-45 185.7 548 31.9
Actinidia09234 Actinidia chinensis HOM05D007878 ORTHO05D010022 2.4e-44 184.1 567 33.2
CsaV3_1G002630 Cucumis sativus L. HOM05D007878 ORTHO05D010022 9.2e-44 182.2 500 34.8
Sopen03g034610 Solanum pennellii HOM05D007878 ORTHO05D010022 2.7e-43 180.6 531 33.3
CiPaw.11G048500 Carya illinoinensis HOM05D007878 ORTHO05D010022 7.8e-43 179.1 567 33.0
PGR083G0831 Punica granatum HOM05D007878 ORTHO05D010022 1.3e-42 178.3 596 31.5
PGSC0003DMG400024662 Solanum tuberosum HOM05D007878 ORTHO05D010022 2.9e-42 177.2 549 32.8
Solyc03g115620.2 Solanum lycopersicum HOM05D007878 ORTHO05D010022 6.6e-42 176.0 527 32.4
Gorai.003G099100 Gossypium raimondii HOM05D007878 ORTHO05D010022 5.6e-41 172.9 451 34.1
CiPaw.11G048800 Carya illinoinensis HOM05D007878 ORTHO05D010022 2.8e-40 170.6 575 31.5
Manes.06G088500 Manihot esculenta HOM05D007878 ORTHO05D010022 2.8e-40 170.6 572 31.1
MBI16_g14990_MAGBIO Magnolia biondii HOM05D007878 ORTHO05D010022 4.7e-40 169.9 550 31.8
Manes.14G082500 Manihot esculenta HOM05D007878 ORTHO05D010022 6.1e-40 169.5 599 29.7
Oeu031812.2 Olea europaea HOM05D007878 ORTHO05D010022 8.9e-39 165.6 548 33.0
MD14G1206000 Malus domestica HOM05D007878 ORTHO05D010022 2.2e-37 161.0 586 30.7
Nn4g23313 Nelumbo nucifera HOM05D007878 ORTHO05D010022 1.1e-36 158.7 599 29.9
TWI60G1109 Tripterygium wilfordii HOM05D007878 ORTHO05D010022 1.1e-36 158.7 581 29.9
Nitab4.5_0001211g0090 Nicotiana tabacum HOM05D007878 ORTHO05D010022 4.1e-36 156.8 527 29.8
Haze_07666 Corylus avellana HOM05D007878 ORTHO05D010022 2.7e-35 154.1 447 33.8
TAR374G1173 Trochodendron aralioides HOM05D007878 ORTHO05D010022 1.1e-33 148.7 603 28.5
Aqoxy3G03537 Aquilegia oxysepala HOM05D007878 ORTHO05D010022 1.6e-32 144.8 603 29.2
QL10p018347 Quercus lobata HOM05D007878 ORTHO05D010022 1.8e-31 141.4 279 41.2
DCAR_016585 Daucus carota HOM05D007878 ORTHO05D010022 2.9e-29 134.0 564 28.9
Nn3g17364 Nelumbo nucifera HOM05D007878 ORTHO05D010022 3.2e-28 130.6 372 32.3
ATR0730G174 Amborella trichopoda HOM05D007878 ORTHO05D010022 4.6e-27 126.7 305 38.0
Cpa.g.sc13.307 Carica papaya HOM05D007878 ORTHO05D010022 3.0e-26 124.0 507 29.0
Peaxi162Scf00274g00029 Petunia axillaris HOM05D007878 ORTHO05D010022 3.9e-26 123.6 577 29.6
Migut.I00229 Erythranthe guttata HOM05D007878 ORTHO05D010022 5.0e-26 123.2 478 30.3
Sed0013205 Sechium edule HOM05D007878 ORTHO05D010022 7.3e-25 119.4 575 28.3
Oeu046990.1 Olea europaea HOM05D007878 ORTHO05D010022 3.6e-24 117.1 483 28.8
GSVIVG01007952001 Vitis vinifera HOM05D007878 ORTHO05D010022 2.6e-22 110.9 472 29.4
ECA246G4297 Erigeron canadensis HOM05D007878 ORTHO05D010022 2.4e-20 104.4 427 28.3
Oeu052465.1 Olea europaea HOM05D007878 ORTHO05D010022 2.4e-20 104.4 567 26.8
Oeu052466.1 Olea europaea HOM05D007878 ORTHO05D010022 4.1e-20 103.6 567 26.8
PSO063G3897 Papaver somniferum HOM05D007878 ORTHO05D010022 7.1e-20 102.8 576 25.5
MD06G1198500 Malus domestica HOM05D007878 ORTHO05D010022 2.7e-19 100.9 577 26.9
Atru.chr9.308 Acer truncatum HOM05D007878 ORTHO05D010022 3.9e-18 97.1 207 39.1
CSS0029238 Camellia sinensis var. sinensis HOM05D000957 ORTHO05D000754 1.5e-17 95.1 418 29.7
Oeu047269.3 Olea europaea HOM05D007878 ORTHO05D010022 1.9e-17 94.7 506 27.3
arahy.Tifrunner.gnm1.ann1.0CJ0KN Arachis hypogaea HOM05D007878 ORTHO05D010022 2.8e-16 90.9 203 36.0
arahy.Tifrunner.gnm1.ann1.H3BYSM Arachis hypogaea HOM05D007878 ORTHO05D010022 4.7e-16 90.1 203 36.0
MSTRG.22991 Avicennia marina HOM05D007878 ORTHO05D010022 1.2e-14 85.5 97 55.7
Eucgr.B00555 Eucalyptus grandis HOM05D007878 ORTHO05D010022 5.8e-14 83.2 489 24.5
HanXRQChr05g0157141 Helianthus annuus HOM05D007878 ORTHO05D010022 5.8e-14 83.2 399 28.8
Lsat_1_v5_gn_5_21161 Lactuca sativa HOM05D007878 ORTHO05D010022 2.1e-11 74.7 173 34.7
DCAR_026030 Daucus carota HOM05D000094 ORTHO05D003883 2.8e-08 64.3 213 31.9
Lj6g0015113 Lotus japonicus HOM05D001827 ORTHO05D001790 1.5e-06 58.5 345 25.2


User provided reference genes

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