Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.3UM0RM Arachis hypogaea HOM05D006525 ORTHO05D007845 2.5e-130 468.8 235 100.0
arahy.Tifrunner.gnm1.ann1.56CREW Arachis hypogaea HOM05D006525 ORTHO05D007845 1.3e-123 446.4 245 93.9
Glyma.08G022100 Glycine max HOM05D006525 ORTHO05D007845 6.0e-100 367.9 233 79.4
Ca_17485_v3 Cicer arietinum L. HOM05D006525 ORTHO05D007845 1.9e-98 362.8 235 79.6
Medtr8g099380 Medicago truncatula HOM05D006525 ORTHO05D007845 2.5e-98 362.5 236 79.2
Phvul.002G297400 Phaseolus vulgaris HOM05D006525 ORTHO05D007845 7.3e-98 360.9 233 77.3
Lj4g0012415 Lotus japonicus HOM05D006525 ORTHO05D007845 2.4e-96 355.9 235 77.9
VMungo0251G1352 Vigna mungo HOM05D006525 ORTHO05D007845 6.9e-96 354.4 229 77.7
Psat7g027440 Pisum sativum HOM05D006525 ORTHO05D007845 2.6e-95 352.4 237 75.5
Lalb_Chr16g0390611 Lupinus albus HOM05D006525 ORTHO05D007845 1.2e-92 343.6 236 75.8
CANSAT21G0126 Cannabis sativa HOM05D006525 ORTHO05D007845 3.8e-86 322.0 243 68.7
THA.LOC104817658 Tarenaya hassleriana HOM05D006525 ORTHO05D007845 1.4e-85 320.1 232 69.8
Potri.001G092800 Populus trichocarpa HOM05D006525 ORTHO05D007845 4.2e-85 318.5 236 68.6
Thecc.03G295800 Theobroma cacao HOM05D006525 ORTHO05D007845 7.9e-84 314.3 240 67.5
Sabra01G0069100 Salix brachista HOM05D006525 ORTHO05D007845 1.0e-83 313.9 236 67.8
Dinv37543 Davidia involucrata HOM05D006525 ORTHO05D007845 1.8e-83 313.2 222 70.7
QL02p030956 Quercus lobata HOM05D006525 ORTHO05D007845 1.1e-82 310.5 205 76.1
TWI15G0402 Tripterygium wilfordii HOM05D006525 ORTHO05D007845 1.1e-82 310.5 228 70.6
Cpa.g.sc79.53 Carica papaya HOM05D006525 ORTHO05D007845 1.5e-82 310.1 237 67.9
FAN18G4350 Fragaria x ananassa HOM05D006525 ORTHO05D007845 1.5e-82 310.1 228 69.7
CiPaw.11G122700 Carya illinoinensis HOM05D006525 ORTHO05D007845 1.9e-82 309.7 230 69.6
FAN13G2324 Fragaria x ananassa HOM05D006525 ORTHO05D007845 1.9e-82 309.7 232 69.4
Duzib068G0461 Durio zibethinus HOM05D006525 ORTHO05D007845 3.3e-82 308.9 233 66.5
Atru.chr9.2016 Acer truncatum HOM05D006525 ORTHO05D007845 4.3e-82 308.5 205 75.1
GSVIVG01019512001 Vitis vinifera HOM05D006525 ORTHO05D007845 5.6e-82 308.1 209 73.7
Prupe.5G117200 Prunus persica HOM05D006525 ORTHO05D007845 9.6e-82 307.4 235 67.7
vmacro11437 Vaccinium macrocarpon HOM05D006525 ORTHO05D007845 1.3e-81 307.0 219 69.9
Ciclev10022095m.g Citrus clementina HOM05D006525 ORTHO05D007845 2.1e-81 306.2 228 68.9
Haze_08630 Corylus avellana HOM05D006525 ORTHO05D007845 3.7e-81 305.4 235 67.2
Rhsim02G0241900 Rhododendron simsii HOM05D006525 ORTHO05D007845 3.7e-81 305.4 206 74.3
Actinidia22144 Actinidia chinensis HOM05D006525 ORTHO05D007845 8.1e-81 304.3 208 73.1
PGR031G0465 Punica granatum HOM05D006525 ORTHO05D007845 8.1e-81 304.3 237 66.7
Gorai.007G025600 Gossypium raimondii HOM05D006525 ORTHO05D007845 1.4e-80 303.5 237 65.0
MD14G1123300 Malus domestica HOM05D006525 ORTHO05D007845 1.4e-80 303.5 239 65.7
Sp7g00260 Schrenkiella parvula HOM05D006525 ORTHO05D007845 1.4e-80 303.5 239 66.1
Cfa022937 Carpinus fangiana HOM05D006525 ORTHO05D007845 4.0e-80 302.0 209 72.7
EL10Ac5g12902 Beta vulgaris HOM05D006525 ORTHO05D007845 1.2e-79 300.4 235 64.3
BraA07t29782Z Brassica rapa HOM05D006525 ORTHO05D007845 1.5e-79 300.1 228 67.5
Gohir.D11G024000 Gossypium hirsutum HOM05D006525 ORTHO05D007845 1.5e-79 300.1 237 64.1
Hma1.2p1_0359F.1_g135310 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 2.0e-79 299.7 205 72.7
CSS0006968 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 2.6e-79 299.3 209 72.2
FAN08G2482 Fragaria x ananassa HOM05D000027 ORTHO05D007845 1.0e-78 297.4 210 71.4
RcHm_v2.0_Chr7g0195151 Rosa chinensis HOM05D006525 ORTHO05D007845 1.3e-78 297.0 211 70.6
Hund11396 Selenicereus undatus HOM05D006525 ORTHO05D007845 1.7e-78 296.6 224 66.5
Aa31LG9G310 Aethionema arabicum HOM05D006525 ORTHO05D007845 2.2e-78 296.2 239 64.0
DCAR_027712 Daucus carota HOM05D006525 ORTHO05D007845 2.2e-78 296.2 238 64.7
C06p20270 Brassica napus HOM05D006525 ORTHO05D007845 2.9e-78 295.8 228 66.7
BolC6t37207H Brassica oleracea HOM05D006525 ORTHO05D007845 2.9e-78 295.8 228 66.7
Carub.0007s3351 Capsella rubella HOM05D006525 ORTHO05D007845 2.9e-78 295.8 230 64.8
BcaB02g07875 Brassica carinata HOM05D006525 ORTHO05D007845 3.8e-78 295.4 228 66.7
Migut.A00669 Erythranthe guttata HOM05D006525 ORTHO05D007845 3.8e-78 295.4 195 73.3
A07p20960 Brassica napus HOM05D006525 ORTHO05D007845 8.4e-78 294.3 228 66.2
Gohir.A11G024300 Gossypium hirsutum HOM05D006525 ORTHO05D007845 1.9e-77 293.1 237 64.1
SalBow1G4596 Salvia bowleyana HOM05D006525 ORTHO05D007845 3.2e-77 292.4 232 64.7
Sopen08g030430 Solanum pennellii HOM05D006525 ORTHO05D007845 4.2e-77 292.0 218 68.8
BcaC08g44560 Brassica carinata HOM05D006525 ORTHO05D007845 5.5e-77 291.6 228 66.2
AT5G41850 Arabidopsis thaliana HOM05D006525 ORTHO05D007845 7.1e-77 291.2 227 65.6
Os05g0214400 Oryza sativa ssp. japonica HOM05D006525 ORTHO05D007845 7.1e-77 291.2 207 68.6
SalBow1G2372 Salvia bowleyana HOM05D006525 ORTHO05D007845 9.3e-77 290.8 232 64.2
MSTRG.11933 Avicennia marina HOM05D006525 ORTHO05D007845 1.2e-76 290.4 213 67.1
AL7G47380 Arabidopsis lyrata HOM05D006525 ORTHO05D007845 2.7e-76 289.3 230 62.6
Manes.01G047000 Manihot esculenta HOM05D006525 ORTHO05D007845 2.7e-76 289.3 206 70.4
ClCG01G001950 Citrullus lanatus HOM05D006525 ORTHO05D007845 6.0e-76 288.1 236 62.7
PGSC0003DMG400012159 Solanum tuberosum HOM05D006525 ORTHO05D007845 7.9e-76 287.7 218 67.9
CARHR212710 Cardamine hirsuta HOM05D006525 ORTHO05D007845 1.0e-75 287.3 206 69.4
AUR62019825 Chenopodium quinoa HOM05D006525 ORTHO05D007845 1.3e-75 287.0 235 62.1
CAN.G532.106 Capsicum annuum HOM05D006525 ORTHO05D007845 1.8e-75 286.6 208 72.1
Aqoxy5G04177 Aquilegia oxysepala HOM05D006525 ORTHO05D007845 2.3e-75 286.2 233 61.8
Cc08_g15920 Coffea canephora HOM05D006525 ORTHO05D007845 2.3e-75 286.2 238 61.3
CsaV3_5G002090 Cucumis sativus L. HOM05D006525 ORTHO05D007845 2.3e-75 286.2 231 62.8
MELO3C005745.2 Cucumis melo HOM05D006525 ORTHO05D007845 3.9e-75 285.4 231 62.8
HPP92_000617 Vanilla planifolia HOM05D006525 ORTHO05D007845 5.1e-75 285.0 232 62.9
Sed0028109 Sechium edule HOM05D006525 ORTHO05D007845 6.7e-75 284.6 234 61.1
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 8.7e-75 284.3 229 60.3
PSO384G4490 Papaver somniferum HOM05D006525 ORTHO05D007845 1.1e-74 283.9 230 64.3
MBI07_g34229_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 2.1e-73 279.6 207 68.1
Eucgr.D01725 Eucalyptus grandis HOM05D006525 ORTHO05D007845 2.8e-73 279.3 208 67.3
Zm00001eb283820 Zea mays HOM05D006525 ORTHO05D007845 1.1e-72 277.3 232 62.1
ECA240G1071 Erigeron canadensis HOM05D006525 ORTHO05D007845 4.1e-72 275.4 228 62.3
Oeu009950.2 Olea europaea HOM05D006525 ORTHO05D007845 1.2e-71 273.9 239 61.5
HanXRQChr17g0535171 Helianthus annuus HOM05D006525 ORTHO05D007845 5.9e-71 271.6 213 63.4
PSO339G1283 Papaver somniferum HOM05D006525 ORTHO05D007845 5.9e-71 271.6 241 61.0
TAR636G1454 Trochodendron aralioides HOM05D006525 ORTHO05D007845 7.6e-71 271.2 192 69.8
HanXRQChr13g0415031 Helianthus annuus HOM05D006525 ORTHO05D007845 3.8e-70 268.9 213 64.3
Thhalv10028271m.g Eutrema salsugineum HOM05D006525 ORTHO05D007845 5.0e-70 268.5 227 61.2
ECA246G0134 Erigeron canadensis HOM05D006525 ORTHO05D007845 6.5e-70 268.1 207 63.3
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 3.2e-69 265.8 251 56.6
MBI07_g34230_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 9.3e-69 264.2 185 71.4
unitig_88.g27636 Utricularia gibba HOM05D006525 ORTHO05D007845 1.6e-68 263.5 206 63.1
SGA_v2.0_scaffold96G28973 Striga asiatica HOM05D006525 ORTHO05D007845 2.3e-67 259.6 283 52.3
AUR62010826 Chenopodium quinoa HOM05D006525 ORTHO05D007845 4.3e-66 255.4 235 57.4
Lsat_1_v5_gn_3_10281 Lactuca sativa HOM05D006525 ORTHO05D007845 5.7e-66 255.0 201 61.7
SMO290G0001 Selaginella moellendorffii HOM05D006525 ORTHO05D007845 1.1e-64 250.8 207 59.9
Nitab4.5_0010144g0010 Nicotiana tabacum HOM05D006525 ORTHO05D007845 9.0e-64 247.7 179 71.5
Nitab4.5_0000223g0360 Nicotiana tabacum HOM05D006525 ORTHO05D007845 5.9e-63 245.0 179 71.5
TPR.G3436 Trifolium pratense HOM05D006525 ORTHO05D007845 1.0e-62 244.2 169 75.1
HanXRQChr06g0166551 Helianthus annuus HOM05D006525 ORTHO05D007845 6.1e-60 235.0 203 59.6
Lsat_1_v5_gn_6_84361 Lactuca sativa HOM05D006525 ORTHO05D007845 1.0e-59 234.2 186 63.4
Lj2A170G33 Lonicera japonica HOM05D006525 ORTHO05D007845 5.1e-59 231.9 163 71.2
CBR_g29721 Chara braunii HOM05D006525 ORTHO05D007845 2.7e-52 209.5 208 48.6
Nn3g19049 Nelumbo nucifera HOM05D006525 ORTHO05D007845 4.4e-50 202.2 160 61.9
MBI07_g27263_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 1.6e-47 193.7 187 55.1
Glyma.05G216200 Glycine max HOM05D006525 ORTHO05D007845 4.5e-47 192.2 118 82.2
FvH4_5g04410 Fragaria vesca HOM05D006525 ORTHO05D007845 5.5e-45 185.3 139 66.2
Pp3c22_1320 Physcomitrium patens HOM05D006525 ORTHO05D007845 1.2e-44 184.1 173 55.5
Hma1.2p1_0359F.1_g135320 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 3.1e-40 169.5 118 72.0
Sc22g0005060 Simmondsia chinensis HOM05D006525 ORTHO05D007845 9.1e-40 167.9 135 63.0
CSS0025848 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 7.7e-39 164.9 111 73.0
CSS0015265 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 2.8e-33 146.4 94 75.5
TPR.G20444 Trifolium pratense HOM05D006525 ORTHO05D007845 1.8e-32 143.7 85 87.1
Solyc08g082150.2 Solanum lycopersicum HOM05D006525 ORTHO05D007845 5.4e-32 142.1 102 66.7
Hma1.2p1_0359F.1_g135300 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 2.2e-30 136.7 88 73.9
ATR0589G090 Amborella trichopoda HOM05D006525 ORTHO05D007845 9.5e-29 131.3 88 70.5
MD06G1104500 Malus domestica HOM05D006525 ORTHO05D007845 9.5e-29 131.3 124 58.1
BcaNung06853 Brassica carinata HOM05D006525 ORTHO05D007845 1.7e-25 120.6 84 71.4
Peaxi162Scf00074g01026 Petunia axillaris HOM05D006525 ORTHO05D007845 2.2e-25 120.2 124 58.1
SEGI_26681 Sequoiadendron giganteum HOM05D006525 ORTHO05D007845 4.9e-25 119.0 89 67.4
Pp3c22_17300 Physcomitrium patens HOM05D006525 ORTHO05D007845 1.0e-22 111.3 133 45.9
AagrBONN_evm.TU.Sc2ySwM_368.643 Anthoceros agrestis HOM05D006525 ORTHO05D007845 1.8e-19 100.5 84 58.3
HanXRQChr03g0061741 Helianthus annuus HOM05D006525 ORTHO05D007845 1.8e-19 100.5 68 69.1
Sc22g0005070 Simmondsia chinensis HOM05D006525 ORTHO05D007845 4.0e-19 99.4 68 69.1
MD06G1104600 Malus domestica HOM05D006525 ORTHO05D007845 1.2e-18 97.8 70 65.7
PGSC0003DMG400026824 Solanum tuberosum HOM05D006525 ORTHO05D007845 7.0e-16 88.6 67 68.7
Lalb_Chr09g0332581 Lupinus albus HOM05D006525 ORTHO05D007845 6.6e-14 82.0 52 78.8


User provided reference genes

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