Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.3U1GZ3 Arachis hypogaea HOM05D005344 ORTHO05D006444 3.3e-53 211.5 107 100.0
arahy.Tifrunner.gnm1.ann1.Y8FRL8 Arachis hypogaea HOM05D005344 ORTHO05D006444 2.3e-51 205.3 107 97.2
arahy.Tifrunner.gnm1.ann1.IGJ8TG Arachis hypogaea HOM05D005344 ORTHO05D006444 2.9e-49 198.4 105 96.2
arahy.Tifrunner.gnm1.ann1.ZTTZ43 Arachis hypogaea HOM05D005344 ORTHO05D006444 1.3e-46 189.5 96 100.0
arahy.Tifrunner.gnm1.ann1.0YI8WX Arachis hypogaea HOM05D005344 ORTHO05D006444 2.3e-46 188.7 96 96.9
arahy.Tifrunner.gnm1.ann1.Y1NSFR Arachis hypogaea HOM05D005344 ORTHO05D006444 1.9e-45 185.7 96 97.9
arahy.Tifrunner.gnm1.ann1.2J2T1L Arachis hypogaea HOM05D005344 ORTHO05D006444 3.3e-45 184.9 100 92.0
arahy.Tifrunner.gnm1.ann1.2QY3VR Arachis hypogaea HOM05D005344 ORTHO05D006444 9.5e-45 183.3 97 95.9
Gohir.D05G218100 Gossypium hirsutum HOM05D005344 ORTHO05D006444 9.5e-45 183.3 107 84.1
arahy.Tifrunner.gnm1.ann1.H9RICG Arachis hypogaea HOM05D005344 ORTHO05D006444 1.6e-44 182.6 95 96.8
Gohir.A05G214800 Gossypium hirsutum HOM05D005344 ORTHO05D006444 2.1e-44 182.2 107 83.2
TWI75G1031 Tripterygium wilfordii HOM05D005344 ORTHO05D006444 2.8e-44 181.8 107 83.2
PGR083G0019 Punica granatum HOM05D005344 ORTHO05D006444 8.1e-44 180.3 107 84.1
CSS0046173 Camellia sinensis var. sinensis HOM05D005344 ORTHO05D006444 1.1e-43 179.9 107 81.3
Duzib093G0333 Durio zibethinus HOM05D005344 ORTHO05D006444 1.1e-43 179.9 107 82.2
TWI31G0971 Tripterygium wilfordii HOM05D005344 ORTHO05D006444 1.1e-43 179.9 107 81.3
arahy.Tifrunner.gnm1.ann1.NGB00B Arachis hypogaea HOM05D005344 ORTHO05D006444 1.4e-43 179.5 96 93.8
Cpa.g.sc116.53 Carica papaya HOM05D005344 ORTHO05D006444 1.4e-43 179.5 105 82.9
CiPaw.08G064300 Carya illinoinensis HOM05D005344 ORTHO05D006444 1.4e-43 179.5 107 81.3
Cc10_g01930 Coffea canephora HOM05D005344 ORTHO05D006444 1.4e-43 179.5 107 81.3
Cfa013923 Carpinus fangiana HOM05D005344 ORTHO05D006444 1.8e-43 179.1 107 81.3
Potri.004G228566 Populus trichocarpa HOM05D005344 ORTHO05D006444 1.8e-43 179.1 107 84.1
Nn6g32300 Nelumbo nucifera HOM05D005344 ORTHO05D006444 2.4e-43 178.7 107 83.2
QL02p011006 Quercus lobata HOM05D005344 ORTHO05D006444 2.4e-43 178.7 106 80.2
PGR102G3231 Punica granatum HOM05D005344 ORTHO05D006444 3.1e-43 178.3 105 84.8
Lalb_Chr11g0061991 Lupinus albus HOM05D005344 ORTHO05D006444 5.2e-43 177.6 107 84.1
Thecc.08G040900 Theobroma cacao HOM05D005344 ORTHO05D006444 6.8e-43 177.2 107 81.3
Nitab4.5_0001988g0010 Nicotiana tabacum HOM05D005344 ORTHO05D006444 8.9e-43 176.8 107 80.4
GSVIVG01009861001 Vitis vinifera HOM05D005344 ORTHO05D006444 8.9e-43 176.8 107 81.3
Sed0018322 Sechium edule HOM05D005344 ORTHO05D006444 1.5e-42 176.0 105 80.0
Dinv39499 Davidia involucrata HOM05D005344 ORTHO05D006444 2.0e-42 175.6 107 81.3
Psat5g014400 Pisum sativum HOM05D005344 ORTHO05D006444 2.0e-42 175.6 107 83.2
CSS0034614 Camellia sinensis var. sinensis HOM05D005344 ORTHO05D006444 2.6e-42 175.3 107 80.4
Solyc04g081220.3 Solanum lycopersicum HOM05D005344 ORTHO05D006444 3.4e-42 174.9 107 79.4
Sopen04g034830 Solanum pennellii HOM05D005344 ORTHO05D006444 3.4e-42 174.9 107 79.4
Medtr3g113260 Medicago truncatula HOM05D005344 ORTHO05D006444 5.8e-42 174.1 107 81.3
PGSC0003DMG400003723 Solanum tuberosum HOM05D005344 ORTHO05D006444 5.8e-42 174.1 107 79.4
QL03p018250 Quercus lobata HOM05D005344 ORTHO05D006444 7.6e-42 173.7 106 78.3
Lj1g0020845 Lotus japonicus HOM05D005344 ORTHO05D006444 9.9e-42 173.3 107 80.4
MD02G1241500 Malus domestica HOM05D005344 ORTHO05D006444 9.9e-42 173.3 107 77.6
Prupe.1G182400 Prunus persica HOM05D005344 ORTHO05D006444 9.9e-42 173.3 107 77.6
Manes.18G015800 Manihot esculenta HOM05D005344 ORTHO05D006444 1.3e-41 172.9 107 79.4
Medtr1g013440 Medicago truncatula HOM05D005344 ORTHO05D006444 1.3e-41 172.9 107 82.2
Atru.chr12.1135 Acer truncatum HOM05D005344 ORTHO05D006444 1.7e-41 172.6 105 79.0
Nitab4.5_0006992g0020 Nicotiana tabacum HOM05D005344 ORTHO05D006444 1.7e-41 172.6 107 79.4
Prupe.1G368800 Prunus persica HOM05D005344 ORTHO05D006444 1.7e-41 172.6 107 77.6
TAR381G0484 Trochodendron aralioides HOM05D005344 ORTHO05D006444 1.7e-41 172.6 107 79.4
FAN15G2308 Fragaria x ananassa HOM05D005344 ORTHO05D006444 2.2e-41 172.2 107 77.6
MD07G1075400 Malus domestica HOM05D005344 ORTHO05D006444 2.2e-41 172.2 107 77.6
RcHm_v2.0_Chr6g0302491 Rosa chinensis HOM05D005344 ORTHO05D006444 2.2e-41 172.2 107 76.6
CANSAT56G2098 Cannabis sativa HOM05D005344 ORTHO05D006444 2.9e-41 171.8 107 79.4
TPR.G5807 Trifolium pratense HOM05D005344 ORTHO05D006444 4.9e-41 171.0 108 81.5
CsaV3_3G045650 Cucumis sativus L. HOM05D005344 ORTHO05D006444 6.4e-41 170.6 105 78.1
Eucgr.F01631 Eucalyptus grandis HOM05D005344 ORTHO05D006444 6.4e-41 170.6 102 80.4
Peaxi162Scf00287g01714 Petunia axillaris HOM05D005344 ORTHO05D006444 8.4e-41 170.2 107 76.6
CANSAT56G2754 Cannabis sativa HOM05D005344 ORTHO05D006444 1.1e-40 169.9 107 78.5
FvH4_2g38800 Fragaria vesca HOM05D005344 ORTHO05D006444 1.1e-40 169.9 107 75.7
SGA_v2.0_scaffold47G17494 Striga asiatica HOM05D005344 ORTHO05D006444 1.1e-40 169.9 107 76.6
TPR.G38895 Trifolium pratense HOM05D005344 ORTHO05D006444 1.1e-40 169.9 107 81.3
Migut.N03145 Erythranthe guttata HOM05D005344 ORTHO05D006444 2.4e-40 168.7 107 74.8
MSTRG.24255 Avicennia marina HOM05D005344 ORTHO05D006444 3.2e-40 168.3 107 75.7
HanXRQChr15g0480961 Helianthus annuus HOM05D005344 ORTHO05D006444 3.2e-40 168.3 107 78.5
Lsat_1_v5_gn_7_29421 Lactuca sativa HOM05D005344 ORTHO05D006444 3.2e-40 168.3 107 77.6
ECA236G2959 Erigeron canadensis HOM05D005344 ORTHO05D006444 4.1e-40 167.9 107 75.7
HanXRQChr04g0119171 Helianthus annuus HOM05D005344 ORTHO05D006444 4.1e-40 167.9 107 77.6
Gorai.009G225000 Gossypium raimondii HOM05D005344 ORTHO05D006444 9.2e-40 166.8 95 84.2
Aa31LG9G16480 Aethionema arabicum HOM05D005344 ORTHO05D006444 1.6e-39 166.0 105 78.1
AT5G39600 Arabidopsis thaliana HOM05D005344 ORTHO05D006444 1.6e-39 166.0 105 79.0
Sc02g0008440 Simmondsia chinensis HOM05D005344 ORTHO05D006444 1.6e-39 166.0 107 72.9
BcaB06g27347 Brassica carinata HOM05D005344 ORTHO05D006444 2.1e-39 165.6 107 76.6
BolC4t26183H Brassica oleracea HOM05D005344 ORTHO05D006444 2.1e-39 165.6 107 76.6
BraA04t16898Z Brassica rapa HOM05D005344 ORTHO05D006444 2.1e-39 165.6 107 76.6
MBI05_g26505_MAGBIO Magnolia biondii HOM05D005344 ORTHO05D006444 2.1e-39 165.6 107 75.7
Carub.0007s3634 Capsella rubella HOM05D005344 ORTHO05D006444 2.7e-39 165.2 105 78.1
Glyma.06G025600 Glycine max HOM05D005344 ORTHO05D006444 3.5e-39 164.9 107 77.6
Phvul.009G015400 Phaseolus vulgaris HOM05D005344 ORTHO05D006444 3.5e-39 164.9 107 79.4
Sabra01G0173600 Salix brachista HOM05D005344 ORTHO05D006444 3.5e-39 164.9 98 82.7
Actinidia15404 Actinidia chinensis HOM05D005344 ORTHO05D006444 4.6e-39 164.5 101 75.2
CSS0046670 Camellia sinensis var. sinensis HOM05D005344 ORTHO05D006444 6.0e-39 164.1 99 78.8
Potri.012G106900 Populus trichocarpa HOM05D005344 ORTHO05D006444 7.8e-39 163.7 95 85.3
Sp7g02390 Schrenkiella parvula HOM05D005344 ORTHO05D006444 7.8e-39 163.7 105 75.2
CARHR262690 Cardamine hirsuta HOM05D005344 ORTHO05D006444 1.0e-38 163.3 105 78.1
Thhalv10027992m.g Eutrema salsugineum HOM05D005344 ORTHO05D006444 1.7e-38 162.5 105 76.2
Haze_22604 Corylus avellana HOM05D005344 ORTHO05D006444 2.3e-38 162.2 95 82.1
AL7G50710 Arabidopsis lyrata HOM05D005344 ORTHO05D006444 3.0e-38 161.8 105 78.1
COL.COLO4_32025 Corchorus olitorius HOM05D005344 ORTHO05D006444 3.0e-38 161.8 95 81.1
PSO541G4852 Papaver somniferum HOM05D005344 ORTHO05D006444 3.9e-38 161.4 107 72.9
PSO675G5369 Papaver somniferum HOM05D005344 ORTHO05D006444 3.9e-38 161.4 107 72.9
ClCG05G018520 Citrullus lanatus HOM05D005344 ORTHO05D006444 6.6e-38 160.6 96 79.2
TAR625G0974 Trochodendron aralioides HOM05D005344 ORTHO05D006444 1.5e-37 159.5 107 72.0
vmacro04337 Vaccinium macrocarpon HOM05D005344 ORTHO05D006444 1.5e-37 159.5 95 78.9
Rhsim07G0245900 Rhododendron simsii HOM05D005344 ORTHO05D006444 4.3e-37 157.9 95 77.9
CDE05G1229 Ceratophyllum demersum HOM05D005344 ORTHO05D006444 5.6e-37 157.5 107 72.0
Nitab4.5_0005425g0020 Nicotiana tabacum HOM05D005344 ORTHO05D006444 7.3e-37 157.1 96 78.1
Ca_16814_v3 Cicer arietinum L. HOM05D005344 ORTHO05D006444 9.6e-37 156.8 95 82.1
DCAR_013854 Daucus carota HOM05D005344 ORTHO05D006444 1.2e-36 156.4 95 77.9
Oeu024518.1 Olea europaea HOM05D005344 ORTHO05D006444 1.2e-36 156.4 96 75.0
CAN.G1271.12 Capsicum annuum HOM05D005344 ORTHO05D006444 1.6e-36 156.0 96 77.1
Glyma.04G025800 Glycine max HOM05D005344 ORTHO05D006444 1.6e-36 156.0 107 73.8
Oeu031192.1 Olea europaea HOM05D005344 ORTHO05D006444 1.6e-36 156.0 96 75.0
SalBow8G2912 Salvia bowleyana HOM05D005344 ORTHO05D006444 1.6e-36 156.0 96 76.0
EL10Ac1g02258 Beta vulgaris HOM05D005344 ORTHO05D006444 2.1e-36 155.6 106 67.9
FAN20G2570 Fragaria x ananassa HOM05D005344 ORTHO05D006444 3.6e-36 154.8 95 75.8
AUR62035723 Chenopodium quinoa HOM05D005344 ORTHO05D006444 1.4e-35 152.9 124 62.1
Ciclev10002838m.g Citrus clementina HOM05D005344 ORTHO05D006444 1.8e-35 152.5 105 68.6
A04p12340 Brassica napus HOM05D005344 ORTHO05D006444 4.0e-35 151.4 99 74.7
C04p46010 Brassica napus HOM05D005344 ORTHO05D006444 4.0e-35 151.4 99 74.7
MELO3C003771.2 Cucumis melo HOM05D005344 ORTHO05D006444 5.2e-35 151.0 96 75.0
VMungo1309G2030 Vigna mungo HOM05D005344 ORTHO05D006444 5.2e-35 151.0 104 76.0
AUR62035436 Chenopodium quinoa HOM05D005344 ORTHO05D006444 3.4e-34 148.3 96 70.8
CDE05G1331 Ceratophyllum demersum HOM05D005344 ORTHO05D006444 9.9e-34 146.7 95 73.7
MSTRG.22330 Avicennia marina HOM05D005344 ORTHO05D006444 1.3e-33 146.4 96 71.9
SHI08085 Sapria himalayana HOM05D005344 ORTHO05D006444 1.7e-33 146.0 95 72.6
FvH4_1g25620 Fragaria vesca HOM05D005344 ORTHO05D006444 2.2e-33 145.6 105 66.7
TAR625G1223 Trochodendron aralioides HOM05D005344 ORTHO05D006444 2.9e-33 145.2 109 66.1
unitig_899.g15276 Utricularia gibba HOM05D005344 ORTHO05D006444 8.4e-33 143.7 126 60.3
Aqoxy6G02319 Aquilegia oxysepala HOM05D005344 ORTHO05D006444 1.1e-32 143.3 107 64.5
HPP92_014936 Vanilla planifolia HOM05D005344 ORTHO05D006444 1.4e-32 142.9 106 68.9
FAN23G0736 Fragaria x ananassa HOM05D005344 ORTHO05D006444 4.2e-32 141.4 113 63.7
Gorai.005G111500 Gossypium raimondii HOM05D005344 ORTHO05D006444 7.1e-32 140.6 100 70.0
Aqoxy6G02944 Aquilegia oxysepala HOM05D005344 ORTHO05D006444 9.3e-32 140.2 95 70.5
ATR0665G498 Amborella trichopoda HOM05D005344 ORTHO05D006444 4.6e-31 137.9 106 65.1
FAN26G0652 Fragaria x ananassa HOM05D005344 ORTHO05D006444 2.3e-30 135.6 100 63.0
Manes.09G054100 Manihot esculenta HOM05D005344 ORTHO05D006444 1.9e-29 132.5 94 66.0
FAN19G0275 Fragaria x ananassa HOM05D005344 ORTHO05D006444 4.3e-29 131.3 99 63.6
MBI07_g11722_MAGBIO Magnolia biondii HOM05D005344 ORTHO05D006444 2.4e-27 125.6 85 74.1
Atru.chr4.1572 Acer truncatum HOM05D005344 ORTHO05D006444 6.9e-27 124.0 94 67.0
Pp3c9_11020 Physcomitrium patens HOM05D005344 ORTHO05D006444 4.2e-24 114.8 107 56.1
Os02g0282100 Oryza sativa ssp. japonica HOM05D005344 ORTHO05D006444 3.5e-23 111.7 121 47.1
Mapoly0151s0020 Marchantia polymorpha HOM05D005344 ORTHO05D006444 2.3e-22 109.0 91 56.0
AagrBONN_evm.TU.Sc2ySwM_117.1156 Anthoceros agrestis HOM05D005344 ORTHO05D006444 2.8e-20 102.1 77 57.1
Zm00001eb237200 Zea mays HOM05D005344 ORTHO05D006444 4.8e-20 101.3 119 45.4
ATR0605G109 Amborella trichopoda HOM05D005344 ORTHO05D006444 2.0e-18 95.9 68 69.1
Hund00462 Selenicereus undatus HOM05D005344 ORTHO05D006444 9.9e-18 93.6 90 51.1
CSS0040415 Camellia sinensis var. sinensis HOM05D005344 ORTHO05D006444 2.1e-07 59.3 37 70.3


User provided reference genes

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