Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.3QT6IB Arachis hypogaea HOM05D006520 ORTHO05D008405 5.7e-116 421.0 223 100.0
arahy.Tifrunner.gnm1.ann1.45MNV2 Arachis hypogaea HOM05D006520 ORTHO05D008405 4.1e-98 361.7 361 61.5
Medtr4g080790 Medicago truncatula HOM05D006520 ORTHO05D008405 2.7e-78 295.8 359 52.6
Ca_18859_v3 Cicer arietinum L. HOM05D006520 ORTHO05D008405 3.5e-73 278.9 363 51.8
Lj3g0004956 Lotus japonicus HOM05D006520 ORTHO05D008405 5.9e-73 278.1 360 51.1
Glyma.06G270300 Glycine max HOM05D006520 ORTHO05D008405 7.7e-73 277.7 358 51.1
Psat7g163040 Pisum sativum HOM05D006520 ORTHO05D008405 5.6e-71 271.6 346 51.7
Lalb_Chr03g0030081 Lupinus albus HOM05D006520 ORTHO05D008405 1.2e-70 270.4 361 50.1
VMungo1127G1053 Vigna mungo HOM05D006520 ORTHO05D008405 1.6e-70 270.0 355 50.4
Phvul.011G139475 Phaseolus vulgaris HOM05D006520 ORTHO05D008405 2.8e-70 269.2 356 50.3
Potri.011G135600 Populus trichocarpa HOM05D006520 ORTHO05D008405 7.0e-66 254.6 358 48.6
QL08p012619 Quercus lobata HOM05D006520 ORTHO05D008405 7.0e-66 254.6 359 48.2
BcaB04g17242 Brassica carinata HOM05D006520 ORTHO05D008405 2.3e-64 249.6 361 46.8
TPR.G25908 Trifolium pratense HOM05D006520 ORTHO05D008405 1.1e-63 247.3 132 95.5
AL1G58660 Arabidopsis lyrata HOM05D006520 ORTHO05D008405 1.5e-63 246.9 367 46.0
Ciclev10008777m.g Citrus clementina HOM05D006520 ORTHO05D008405 1.9e-63 246.5 358 46.6
Nn3g21422 Nelumbo nucifera HOM05D006520 ORTHO05D008405 2.5e-63 246.1 359 47.1
TAR362G1255 Trochodendron aralioides HOM05D006520 ORTHO05D008405 5.6e-63 245.0 362 46.7
CiPaw.11G185500 Carya illinoinensis HOM05D006520 ORTHO05D008405 7.3e-63 244.6 361 46.3
Cc05_g13380 Coffea canephora HOM05D006520 ORTHO05D008405 9.5e-63 244.2 360 46.9
Migut.M01795 Erythranthe guttata HOM05D006520 ORTHO05D008405 9.5e-63 244.2 347 47.8
BcaC01g01246 Brassica carinata HOM05D006520 ORTHO05D008405 1.6e-62 243.4 361 46.3
BolC3t21294H Brassica oleracea HOM05D006520 ORTHO05D008405 1.6e-62 243.4 361 46.3
Carub.0001s3988 Capsella rubella HOM05D006520 ORTHO05D008405 1.6e-62 243.4 367 45.5
AT1G50940 Arabidopsis thaliana HOM05D006520 ORTHO05D008405 2.1e-62 243.0 365 45.8
C03p89710 Brassica napus HOM05D006520 ORTHO05D008405 2.1e-62 243.0 360 46.1
Cfa020400 Carpinus fangiana HOM05D006520 ORTHO05D008405 3.6e-62 242.3 359 46.0
Eucgr.F00972 Eucalyptus grandis HOM05D006520 ORTHO05D008405 4.7e-62 241.9 361 45.4
vmacro11755 Vaccinium macrocarpon HOM05D006520 ORTHO05D008405 4.7e-62 241.9 358 46.4
Thhalv10011599m.g Eutrema salsugineum HOM05D006520 ORTHO05D008405 6.2e-62 241.5 363 45.5
Atru.chr2.3238 Acer truncatum HOM05D006520 ORTHO05D008405 8.0e-62 241.1 361 44.9
BraA08t32341Z Brassica rapa HOM05D006520 ORTHO05D008405 8.0e-62 241.1 355 46.8
THA.LOC104817880 Tarenaya hassleriana HOM05D006520 ORTHO05D008405 8.0e-62 241.1 363 46.0
CSS0025953 Camellia sinensis var. sinensis HOM05D006520 ORTHO05D008405 1.4e-61 240.4 356 46.6
FvH4_3g22000 Fragaria vesca HOM05D006520 ORTHO05D008405 2.3e-61 239.6 363 46.0
Aqoxy5G00708 Aquilegia oxysepala HOM05D006520 ORTHO05D008405 4.0e-61 238.8 357 44.8
Sc16g0006360 Simmondsia chinensis HOM05D006520 ORTHO05D008405 4.0e-61 238.8 334 47.6
Cpa.g.sc1133.1 Carica papaya HOM05D006520 ORTHO05D008405 5.2e-61 238.4 363 45.7
CsaV3_3G023150 Cucumis sativus L. HOM05D006520 ORTHO05D008405 5.2e-61 238.4 352 46.3
Dinv22290 Davidia involucrata HOM05D006520 ORTHO05D008405 5.2e-61 238.4 360 45.8
FAN16G1768 Fragaria x ananassa HOM05D006520 ORTHO05D008405 5.2e-61 238.4 362 46.1
A08p03100 Brassica napus HOM05D006520 ORTHO05D008405 6.8e-61 238.0 355 46.5
Duzib213G0852 Durio zibethinus HOM05D006520 ORTHO05D008405 6.8e-61 238.0 358 45.8
Gohir.A01G076200 Gossypium hirsutum HOM05D006520 ORTHO05D008405 6.8e-61 238.0 359 44.8
Gorai.002G084200 Gossypium raimondii HOM05D006520 ORTHO05D008405 6.8e-61 238.0 359 44.8
Ah.06g182970 Amaranthus hybridus HOM05D006520 ORTHO05D008405 8.9e-61 237.7 353 45.6
Thecc.07G046500 Theobroma cacao HOM05D006520 ORTHO05D008405 1.2e-60 237.3 364 44.8
GSVIVG01001984001 Vitis vinifera HOM05D006520 ORTHO05D008405 1.2e-60 237.3 348 46.0
HanXRQChr08g0234071 Helianthus annuus HOM05D006520 ORTHO05D008405 1.5e-60 236.9 337 46.6
MD03G1209400 Malus domestica HOM05D006520 ORTHO05D008405 1.5e-60 236.9 358 45.8
Lj8A167T45 Lonicera japonica HOM05D006520 ORTHO05D008405 2.0e-60 236.5 358 45.8
Nitab4.5_0004600g0010 Nicotiana tabacum HOM05D006520 ORTHO05D008405 2.0e-60 236.5 332 47.0
FAN21G1190 Fragaria x ananassa HOM05D006520 ORTHO05D008405 2.6e-60 236.1 363 46.0
Lsat_1_v5_gn_7_65980 Lactuca sativa HOM05D006520 ORTHO05D008405 3.4e-60 235.7 353 44.2
RcHm_v2.0_Chr5g0037851 Rosa chinensis HOM05D006520 ORTHO05D008405 3.4e-60 235.7 363 46.0
CANSAT35G1182 Cannabis sativa HOM05D006520 ORTHO05D008405 4.4e-60 235.3 356 46.1
Prupe.4G205700 Prunus persica HOM05D006520 ORTHO05D008405 4.4e-60 235.3 132 90.2
Sed0027741 Sechium edule HOM05D006520 ORTHO05D008405 4.4e-60 235.3 364 45.3
EL10Ac4g07934 Beta vulgaris HOM05D006520 ORTHO05D008405 5.8e-60 235.0 132 88.6
DCAR_010030 Daucus carota HOM05D006520 ORTHO05D008405 5.8e-60 235.0 132 89.4
PGSC0003DMG400001100 Solanum tuberosum HOM05D006520 ORTHO05D008405 5.8e-60 235.0 332 47.0
CAN.G315.8 Capsicum annuum HOM05D006520 ORTHO05D008405 7.5e-60 234.6 332 47.0
CARHR040980 Cardamine hirsuta HOM05D006520 ORTHO05D008405 7.5e-60 234.6 363 44.6
Oeu021407.1 Olea europaea HOM05D006520 ORTHO05D008405 7.5e-60 234.6 132 88.6
Solyc12g005200.3 Solanum lycopersicum HOM05D006520 ORTHO05D008405 7.5e-60 234.6 332 46.7
Nitab4.5_0000653g0110 Nicotiana tabacum HOM05D006520 ORTHO05D008405 9.8e-60 234.2 332 47.0
Actinidia09928 Actinidia chinensis HOM05D006520 ORTHO05D008405 1.3e-59 233.8 132 89.4
TWI38G0825 Tripterygium wilfordii HOM05D006520 ORTHO05D008405 1.3e-59 233.8 359 45.7
MELO3C018098.2 Cucumis melo HOM05D006520 ORTHO05D008405 1.7e-59 233.4 352 45.7
Manes.15G075200 Manihot esculenta HOM05D006520 ORTHO05D008405 2.2e-59 233.0 132 88.6
Sp1g37680 Schrenkiella parvula HOM05D006520 ORTHO05D008405 2.9e-59 232.6 365 44.9
Sopen12g001190 Solanum pennellii HOM05D006520 ORTHO05D008405 2.9e-59 232.6 332 46.7
Os03g0835400 Oryza sativa ssp. japonica HOM05D006520 ORTHO05D008405 3.7e-59 232.3 357 44.5
COL.COLO4_09604 Corchorus olitorius HOM05D006520 ORTHO05D008405 6.4e-59 231.5 362 44.8
PGR083G2407 Punica granatum HOM05D006520 ORTHO05D008405 6.4e-59 231.5 130 87.7
Hund18268 Selenicereus undatus HOM05D006520 ORTHO05D008405 6.4e-59 231.5 353 44.5
PSO832G0135 Papaver somniferum HOM05D006520 ORTHO05D008405 8.3e-59 231.1 363 44.4
Sabra11G0121700 Salix brachista HOM05D006520 ORTHO05D008405 1.1e-58 230.7 367 44.4
Aa31LG10G3340 Aethionema arabicum HOM05D006520 ORTHO05D008405 1.4e-58 230.3 364 43.7
Haze_09634 Corylus avellana HOM05D006520 ORTHO05D008405 1.4e-58 230.3 372 44.6
Sabra11G0121400 Salix brachista HOM05D006520 ORTHO05D008405 1.4e-58 230.3 386 43.5
PSO210G5695 Papaver somniferum HOM05D006520 ORTHO05D008405 1.9e-58 229.9 363 44.1
HPP92_026253 Vanilla planifolia HOM05D006520 ORTHO05D008405 4.1e-58 228.8 131 88.5
AUR62020529 Chenopodium quinoa HOM05D006520 ORTHO05D008405 7.0e-58 228.0 130 86.2
SGA_v2.0_scaffold258G45796 Striga asiatica HOM05D006520 ORTHO05D008405 7.0e-58 228.0 349 45.0
AUR62043225 Chenopodium quinoa HOM05D006520 ORTHO05D008405 1.2e-57 227.3 130 85.4
ECA246G0715 Erigeron canadensis HOM05D006520 ORTHO05D008405 2.0e-57 226.5 335 45.4
Peaxi162Scf01097g00110 Petunia axillaris HOM05D006520 ORTHO05D008405 4.6e-57 225.3 357 44.8
CsaV3_3G025180 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.3e-56 223.0 132 85.6
ATR0706G183 Amborella trichopoda HOM05D006520 ORTHO05D008405 3.0e-56 222.6 331 44.1
Mapoly0055s0094 Marchantia polymorpha HOM05D006520 ORTHO05D008405 2.0e-52 209.9 349 40.1
ClCG05G014620 Citrullus lanatus HOM05D006520 ORTHO05D008405 1.1e-50 204.1 364 41.5
SMO169G0265 Selaginella moellendorffii HOM05D006520 ORTHO05D008405 2.7e-49 199.5 131 73.3
Pp3c15_18640 Physcomitrium patens HOM05D006520 ORTHO05D008405 6.0e-49 198.4 331 39.6
SHI31861 Sapria himalayana HOM05D006520 ORTHO05D008405 3.0e-48 196.1 156 68.6
Cre16.g687950 Chlamydomonas reinhardtii HOM05D006520 ORTHO05D008405 2.0e-44 183.3 125 68.8
CDE01G0592 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 2.2e-43 179.9 170 62.9
Haze_27296 Corylus avellana HOM05D006520 ORTHO05D008405 7.1e-42 174.9 131 66.4
PRCOL_00001901 Prasinoderma coloniale HOM05D006520 ORTHO05D008405 2.7e-41 172.9 186 53.2
CsaV3_UNG094710 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.0e-40 171.0 176 58.0
SEGI_31254 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 2.8e-38 162.9 91 90.1
Cfa027367 Carpinus fangiana HOM05D006520 ORTHO05D008405 7.6e-36 154.8 174 53.4
TAR362G0323 Trochodendron aralioides HOM05D000062 ORTHO05D000043 3.5e-33 146.0 161 55.3
unitig_62.g23271 Utricularia gibba HOM05D006520 ORTHO05D008405 1.5e-23 114.0 66 84.8
Gohir.D01G063700 Gossypium hirsutum HOM05D006520 ORTHO05D008405 3.3e-23 112.8 293 33.1
CDE01G0120 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 1.8e-21 107.1 57 93.0
Pp3c15_18800 Physcomitrium patens HOM05D006520 ORTHO05D008405 1.8e-13 80.5 59 62.7
EL10Ac4g08085 Beta vulgaris HOM05D006520 ORTHO05D090166 3.1e-13 79.7 43 93.0
MD11G1224100 Malus domestica HOM05D006520 ORTHO05D008405 9.0e-13 78.2 46 84.8
Glyma.12G134400 Glycine max HOM05D006520 ORTHO05D008405 2.0e-12 77.0 86 59.3
Haze_27029 Corylus avellana HOM05D006520 ORTHO05D008405 3.4e-12 76.3 98 45.9
SalBow6G5624 Salvia bowleyana HOM05D006520 ORTHO05D008405 6.5e-11 72.0 267 28.8
CiPaw.11G185700 Carya illinoinensis HOM05D006520 ORTHO05D008405 3.2e-10 69.7 94 51.1
Zm00001eb063680 Zea mays HOM05D006520 ORTHO05D008405 9.3e-10 68.2 68 61.8
AagrBONN_evm.TU.Sc2ySwM_228.3593 Anthoceros agrestis HOM05D006520 ORTHO05D008405 2.1e-09 67.0 92 46.7
SEGI_24363 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 1.0e-08 64.7 68 60.3
CsaV3_3G025190 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.3e-08 63.5 69 55.1
SEGI_23300 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 2.3e-08 63.5 41 73.2
Actinidia27215 Actinidia chinensis HOM05D006520 ORTHO05D008405 5.1e-08 62.4 90 50.0
unitig_62.g23270 Utricularia gibba HOM05D006520 ORTHO05D008405 1.9e-07 60.5 62 62.9


User provided reference genes

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