Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.3MFN7L Arachis hypogaea HOM05D003294 ORTHO05D004060 7.2e-67 257.3 124 100.0
arahy.Tifrunner.gnm1.ann1.067A10 Arachis hypogaea HOM05D003294 ORTHO05D004060 1.7e-63 246.1 124 96.0
arahy.Tifrunner.gnm1.ann1.MNWX4W Arachis hypogaea HOM05D003294 ORTHO05D004060 3.2e-46 188.7 95 94.7
arahy.Tifrunner.gnm1.ann1.AM9QWL Arachis hypogaea HOM05D003294 ORTHO05D004060 1.2e-45 186.8 99 89.9
arahy.Tifrunner.gnm1.ann1.U55V76 Arachis hypogaea HOM05D003294 ORTHO05D004060 1.6e-45 186.4 95 93.7
arahy.Tifrunner.gnm1.ann1.F7AR35 Arachis hypogaea HOM05D003294 ORTHO05D004060 3.9e-44 181.8 106 85.8
arahy.Tifrunner.gnm1.ann1.U0YEJU Arachis hypogaea HOM05D003294 ORTHO05D004060 3.9e-44 181.8 106 85.8
TPR.G36208 Trifolium pratense HOM05D003294 ORTHO05D004060 1.0e-36 157.1 106 72.6
VMungo1383G0624 Vigna mungo HOM05D003294 ORTHO05D004060 1.7e-36 156.4 106 75.5
TPR.G40851 Trifolium pratense HOM05D003294 ORTHO05D004060 5.1e-36 154.8 106 70.8
Psat6g050240 Pisum sativum HOM05D003294 ORTHO05D004060 1.5e-35 153.3 105 72.4
Medtr1g033080 Medicago truncatula HOM05D003294 ORTHO05D004060 2.5e-35 152.5 105 71.4
Medtr1g033130 Medicago truncatula HOM05D003294 ORTHO05D004060 2.5e-35 152.5 105 71.4
Medtr1g033100 Medicago truncatula HOM05D003294 ORTHO05D004060 4.3e-35 151.8 99 75.8
Phvul.008G003200 Phaseolus vulgaris HOM05D003294 ORTHO05D004060 4.3e-35 151.8 106 71.7
TPR.G6490 Trifolium pratense HOM05D003294 ORTHO05D004060 1.6e-34 149.8 99 73.7
Phvul.007G084600 Phaseolus vulgaris HOM05D003294 ORTHO05D004060 2.1e-34 149.4 105 71.4
arahy.Tifrunner.gnm1.ann1.NU92WK Arachis hypogaea HOM05D003294 ORTHO05D004060 3.6e-34 148.7 105 70.5
Medtr1g116947 Medicago truncatula HOM05D003294 ORTHO05D004060 3.6e-34 148.7 105 70.5
Phvul.007G002400 Phaseolus vulgaris HOM05D003294 ORTHO05D004060 4.7e-34 148.3 105 70.5
arahy.Tifrunner.gnm1.ann1.XI0QBF Arachis hypogaea HOM05D003294 ORTHO05D004060 6.2e-34 147.9 123 63.4
Ca_13008_v3 Cicer arietinum L. HOM05D003294 ORTHO05D004060 8.1e-34 147.5 103 71.8
Psat0s2492g0040 Pisum sativum HOM05D003294 ORTHO05D004060 8.1e-34 147.5 105 69.5
Lj5g0001019 Lotus japonicus HOM05D003294 ORTHO05D004060 1.8e-33 146.4 105 67.6
VMungo0720G0780 Vigna mungo HOM05D003294 ORTHO05D004060 3.1e-33 145.6 105 67.6
Ca_13009_v3 Cicer arietinum L. HOM05D003294 ORTHO05D004060 2.6e-32 142.5 107 67.3
Glyma.20G247850 Glycine max HOM05D003294 ORTHO05D004060 2.6e-32 142.5 105 68.6
Ca_13010_v3 Cicer arietinum L. HOM05D003294 ORTHO05D004060 3.4e-32 142.1 103 67.0
Cfa015791 Carpinus fangiana HOM05D003294 ORTHO05D004060 5.8e-32 141.4 109 68.8
Duzib151G0954 Durio zibethinus HOM05D003294 ORTHO05D004060 1.3e-31 140.2 108 66.7
Lalb_Chr21g0307691 Lupinus albus HOM05D003294 ORTHO05D004060 1.7e-31 139.8 99 69.7
Sp4g25280 Schrenkiella parvula HOM05D003294 ORTHO05D004060 1.7e-31 139.8 108 65.7
SpUn0921_0020 Schrenkiella parvula HOM05D003294 ORTHO05D004060 1.7e-31 139.8 108 65.7
Lj6g0023787 Lotus japonicus HOM05D003294 ORTHO05D004060 2.9e-31 139.0 105 65.7
Atru.chr3.1652 Acer truncatum HOM05D003294 ORTHO05D004060 3.8e-31 138.7 108 66.7
Lj2g0020269 Lotus japonicus HOM05D003294 ORTHO05D004060 4.9e-31 138.3 105 66.7
Lalb_Chr02g0144471 Lupinus albus HOM05D003294 ORTHO05D004060 4.9e-31 138.3 105 67.6
Sabra02G0176500 Salix brachista HOM05D003294 ORTHO05D004060 4.9e-31 138.3 109 65.1
Thecc.04G182000 Theobroma cacao HOM05D003294 ORTHO05D004060 4.9e-31 138.3 108 65.7
TWI15G0198 Tripterygium wilfordii HOM05D003294 ORTHO05D004060 1.1e-30 137.1 108 66.7
Gohir.D09G203900 Gossypium hirsutum HOM05D003294 ORTHO05D004060 1.4e-30 136.7 108 65.7
Gorai.006G227800 Gossypium raimondii HOM05D003294 ORTHO05D004060 1.4e-30 136.7 108 65.7
Duzib268G0989 Durio zibethinus HOM05D003294 ORTHO05D004060 1.9e-30 136.3 105 65.7
BraA09t40598Z Brassica rapa HOM05D003294 ORTHO05D004060 2.4e-30 136.0 108 63.9
PGSC0003DMG400021603 Solanum tuberosum HOM05D003294 ORTHO05D004060 2.4e-30 136.0 108 65.7
Actinidia35892 Actinidia chinensis HOM05D003294 ORTHO05D004060 5.4e-30 134.8 108 65.7
Sopen09g036430 Solanum pennellii HOM05D003294 ORTHO05D004060 5.4e-30 134.8 108 64.8
BcaC07g40319 Brassica carinata HOM05D003294 ORTHO05D004060 9.2e-30 134.0 108 63.9
C08p34360 Brassica napus HOM05D003294 ORTHO05D004060 9.2e-30 134.0 108 63.9
THA.LOC104802293 Tarenaya hassleriana HOM05D003294 ORTHO05D004060 9.2e-30 134.0 108 62.0
THA.LOC104803514 Tarenaya hassleriana HOM05D003294 ORTHO05D004060 9.2e-30 134.0 108 63.9
A09p51590 Brassica napus HOM05D003294 ORTHO05D004060 1.2e-29 133.7 108 63.0
CARHR169650 Cardamine hirsuta HOM05D003294 ORTHO05D004060 1.2e-29 133.7 103 66.0
QL10p046489 Quercus lobata HOM05D003294 ORTHO05D004060 1.2e-29 133.7 108 62.0
CARHR138220 Cardamine hirsuta HOM05D003294 ORTHO05D004060 2.1e-29 132.9 108 63.9
A04p32470 Brassica napus HOM05D003294 ORTHO05D004060 2.7e-29 132.5 108 63.0
BolC8t51035H Brassica oleracea HOM05D003294 ORTHO05D004060 2.7e-29 132.5 108 63.0
BraA04t18713Z Brassica rapa HOM05D003294 ORTHO05D004060 2.7e-29 132.5 108 63.0
Actinidia17219 Actinidia chinensis HOM05D003294 ORTHO05D004060 3.5e-29 132.1 108 63.9
A03p24060 Brassica napus HOM05D003294 ORTHO05D004060 3.5e-29 132.1 108 63.0
C03p28650 Brassica napus HOM05D003294 ORTHO05D004060 3.5e-29 132.1 108 63.0
C04p70160 Brassica napus HOM05D003294 ORTHO05D004060 3.5e-29 132.1 108 63.0
BolC3t15227H Brassica oleracea HOM05D003294 ORTHO05D004060 3.5e-29 132.1 108 63.0
BolC4t28519H Brassica oleracea HOM05D003294 ORTHO05D004060 3.5e-29 132.1 108 63.0
BraA03t11617Z Brassica rapa HOM05D003294 ORTHO05D004060 3.5e-29 132.1 108 63.0
Oeu006702.1 Olea europaea HOM05D003294 ORTHO05D004060 3.5e-29 132.1 108 64.8
Nn1g09740 Nelumbo nucifera HOM05D003294 ORTHO05D004060 4.6e-29 131.7 108 63.9
Gorai.005G018000 Gossypium raimondii HOM05D003294 ORTHO05D004060 6.0e-29 131.3 109 61.5
Actinidia35893 Actinidia chinensis HOM05D003294 ORTHO05D004060 7.8e-29 131.0 108 64.8
Potri.002G231250 Populus trichocarpa HOM05D003294 ORTHO05D004060 7.8e-29 131.0 108 63.0
Aa31LG1G24960 Aethionema arabicum HOM05D003294 ORTHO05D004060 1.0e-28 130.6 108 62.0
Haze_00702 Corylus avellana HOM05D003294 ORTHO05D004060 1.0e-28 130.6 101 69.3
SpUn1318_0010 Schrenkiella parvula HOM05D003294 ORTHO05D004060 1.0e-28 130.6 108 62.0
BolC4t22061H Brassica oleracea HOM05D003294 ORTHO05D004060 1.3e-28 130.2 108 62.0
BraA05t19350Z Brassica rapa HOM05D003294 ORTHO05D004060 1.3e-28 130.2 108 62.0
CSS0007766 Camellia sinensis var. sinensis HOM05D003294 ORTHO05D004060 1.3e-28 130.2 108 62.0
Potri.014G151101 Populus trichocarpa HOM05D003294 ORTHO05D004060 1.3e-28 130.2 109 62.4
CAN.G710.61 Capsicum annuum HOM05D003294 ORTHO05D004060 1.7e-28 129.8 108 63.9
Manes.11G114666 Manihot esculenta HOM05D003294 ORTHO05D004060 1.7e-28 129.8 108 63.9
Sed0006652 Sechium edule HOM05D003294 ORTHO05D004060 1.7e-28 129.8 108 62.0
Cpa.g.sc164.2 Carica papaya HOM05D003294 ORTHO05D004060 3.0e-28 129.0 109 61.5
ClCG07G016610 Citrullus lanatus HOM05D003294 ORTHO05D004060 3.9e-28 128.6 108 62.0
Gohir.A02G013500 Gossypium hirsutum HOM05D003294 ORTHO05D004060 5.1e-28 128.3 109 60.6
Sed0017100 Sechium edule HOM05D003294 ORTHO05D004060 5.1e-28 128.3 108 62.0
Cc03_g11110 Coffea canephora HOM05D003294 ORTHO05D004060 8.7e-28 127.5 108 63.0
Gohir.A09G210500 Gossypium hirsutum HOM05D003294 ORTHO05D004060 8.7e-28 127.5 108 63.0
CAN.G484.118 Capsicum annuum HOM05D003294 ORTHO05D004060 1.1e-27 127.1 108 61.1
PGR142G3893 Punica granatum HOM05D003294 ORTHO05D004060 1.1e-27 127.1 109 62.4
Dinv44225 Davidia involucrata HOM05D003294 ORTHO05D004060 1.5e-27 126.7 105 63.8
Gohir.D02G014550 Gossypium hirsutum HOM05D003294 ORTHO05D004060 1.5e-27 126.7 109 59.6
CiPaw.01G105500 Carya illinoinensis HOM05D003294 ORTHO05D004060 1.9e-27 126.3 109 64.2
Sabra14G0114500 Salix brachista HOM05D003294 ORTHO05D004060 1.9e-27 126.3 108 62.0
PGSC0003DMG400004675 Solanum tuberosum HOM05D003294 ORTHO05D004060 2.5e-27 125.9 108 61.1
PGSC0003DMG400004676 Solanum tuberosum HOM05D003294 ORTHO05D004060 2.5e-27 125.9 108 61.1
CAN.G484.120 Capsicum annuum HOM05D003294 ORTHO05D004060 3.3e-27 125.6 108 61.1
Sopen12g033510 Solanum pennellii HOM05D003294 ORTHO05D004060 3.3e-27 125.6 108 60.2
CsaV3_4G003720 Cucumis sativus L. HOM05D003294 ORTHO05D004060 4.3e-27 125.2 108 61.1
Solyc12g150132.1 Solanum lycopersicum HOM05D003294 ORTHO05D004060 5.6e-27 124.8 108 60.2
PGSC0003DMG400002364 Solanum tuberosum HOM05D003294 ORTHO05D004060 5.6e-27 124.8 108 61.1
TAR365G0590 Trochodendron aralioides HOM05D003294 ORTHO05D004060 5.6e-27 124.8 108 61.1
Carub.0555s0001 Capsella rubella HOM05D003294 ORTHO05D004060 7.3e-27 124.4 108 61.1
Lj6A66G18 Lonicera japonica HOM05D003294 ORTHO05D004060 7.3e-27 124.4 109 61.5
Lju521A1G13 Lonicera japonica HOM05D003294 ORTHO05D004060 7.3e-27 124.4 109 61.5
DCAR_023908 Daucus carota HOM05D003294 ORTHO05D004060 9.6e-27 124.0 109 60.6
Peaxi162Scf00378g00826 Petunia axillaris HOM05D003294 ORTHO05D004060 9.6e-27 124.0 108 61.1
Peaxi162Scf00378g00827 Petunia axillaris HOM05D003294 ORTHO05D004060 9.6e-27 124.0 108 61.1
Peaxi162Scf00378g00828 Petunia axillaris HOM05D003294 ORTHO05D004060 9.6e-27 124.0 108 61.1
Sabra14G0114900 Salix brachista HOM05D003294 ORTHO05D004060 9.6e-27 124.0 108 61.1
BcaB01g03408 Brassica carinata HOM05D003294 ORTHO05D004060 1.2e-26 123.6 98 65.3
Peaxi162Scf00286g00022 Petunia axillaris HOM05D003294 ORTHO05D004060 1.2e-26 123.6 108 60.2
Hund31331 Selenicereus undatus HOM05D003294 ORTHO05D004060 1.2e-26 123.6 108 60.2
Hund31332 Selenicereus undatus HOM05D003294 ORTHO05D004060 1.2e-26 123.6 108 60.2
MELO3C000009.2 Cucumis melo HOM05D000068 ORTHO05D000084 1.6e-26 123.2 108 60.2
Rhsim09G0035700 Rhododendron simsii HOM05D003294 ORTHO05D004060 1.6e-26 123.2 108 59.3
Lj6C64T13 Lonicera japonica HOM05D003294 ORTHO05D004060 2.1e-26 122.9 108 60.2
Nitab4.5_0001049g0140 Nicotiana tabacum HOM05D003294 ORTHO05D004060 2.1e-26 122.9 98 65.3
CAN.G484.117 Capsicum annuum HOM05D003294 ORTHO05D004060 2.8e-26 122.5 108 59.3
Psat0s3952g0120 Pisum sativum HOM05D003294 ORTHO05D004060 2.8e-26 122.5 86 70.9
Solyc12g150131.1 Solanum lycopersicum HOM05D003294 ORTHO05D004060 2.8e-26 122.5 108 60.2
Sopen12g033500 Solanum pennellii HOM05D003294 ORTHO05D004060 2.8e-26 122.5 108 60.2
FAN22G1863 Fragaria x ananassa HOM05D003294 ORTHO05D004060 3.6e-26 122.1 109 57.8
Nitab4.5_0000383g0350 Nicotiana tabacum HOM05D003294 ORTHO05D004060 3.6e-26 122.1 108 58.3
Peaxi162Scf00323g00521 Petunia axillaris HOM05D003294 ORTHO05D004060 3.6e-26 122.1 108 60.2
Solyc12g098780.2 Solanum lycopersicum HOM05D003294 ORTHO05D004060 3.6e-26 122.1 108 60.2
Sopen12g033530 Solanum pennellii HOM05D003294 ORTHO05D004060 3.6e-26 122.1 108 60.2
PSO017G7143 Papaver somniferum HOM05D003294 ORTHO05D004060 4.7e-26 121.7 109 55.0
Sopen12g033540 Solanum pennellii HOM05D003294 ORTHO05D004060 4.7e-26 121.7 108 61.1
CAN.G484.121 Capsicum annuum HOM05D003294 ORTHO05D004060 6.2e-26 121.3 108 59.3
MBI11_g02538_MAGBIO Magnolia biondii HOM05D003294 ORTHO05D004060 6.2e-26 121.3 108 59.3
Nitab4.5_0011287g0010 Nicotiana tabacum HOM05D003294 ORTHO05D004060 8.1e-26 120.9 108 58.3
SGA_v2.0_scaffold406G51043 Striga asiatica HOM05D003294 ORTHO05D004060 1.1e-25 120.6 109 58.7
unitig_744.g24077 Utricularia gibba HOM05D003294 ORTHO05D004060 1.4e-25 120.2 106 58.5
FAN17G2242 Fragaria x ananassa HOM05D003294 ORTHO05D004060 1.8e-25 119.8 109 56.0
Sopen12g018920 Solanum pennellii HOM05D003294 ORTHO05D004060 2.4e-25 119.4 108 59.3
Sopen12g033520 Solanum pennellii HOM05D003294 ORTHO05D004060 3.1e-25 119.0 108 59.3
FAN07G0287 Fragaria x ananassa HOM05D003294 ORTHO05D004060 6.9e-25 117.9 109 56.9
Hund06534 Selenicereus undatus HOM05D003294 ORTHO05D004060 6.9e-25 117.9 105 59.0
Aa31LG10G13630 Aethionema arabicum HOM05D003294 ORTHO05D004060 1.2e-24 117.1 108 56.5
FvH4_4g11660 Fragaria vesca HOM05D003294 ORTHO05D004060 1.2e-24 117.1 109 56.0
FAN12G0818 Fragaria x ananassa HOM05D003294 ORTHO05D004060 1.2e-24 117.1 109 56.0
FAN12G1447 Fragaria x ananassa HOM05D003294 ORTHO05D004060 1.2e-24 117.1 109 56.0
Migut.G00806 Erythranthe guttata HOM05D003294 ORTHO05D004060 1.5e-24 116.7 108 59.3
Nitab4.5_0000383g0230 Nicotiana tabacum HOM05D003294 ORTHO05D004060 1.5e-24 116.7 108 57.4
Peaxi162Scf00323g00618 Petunia axillaris HOM05D003294 ORTHO05D004060 2.0e-24 116.3 108 56.5
Nitab4.5_0004568g0020 Nicotiana tabacum HOM05D003294 ORTHO05D004060 2.9e-23 112.5 104 57.7
Nn7g38030 Nelumbo nucifera HOM05D003294 ORTHO05D004060 3.8e-23 112.1 111 54.1
Aqoxy2G04082 Aquilegia oxysepala HOM05D003294 ORTHO05D004060 1.1e-22 110.5 107 53.3
MBI08_g05500_MAGBIO Magnolia biondii HOM05D003294 ORTHO05D004060 1.9e-22 109.8 109 55.0
MBI08_g05491_MAGBIO Magnolia biondii HOM05D003294 ORTHO05D004060 3.2e-22 109.0 109 54.1
Sc10g0006170 Simmondsia chinensis HOM05D003294 ORTHO05D004060 3.2e-22 109.0 85 62.4
Peaxi162Scf00323g00616 Petunia axillaris HOM05D003294 ORTHO05D004060 4.2e-22 108.6 103 56.3
Nitab4.5_0020026g0010 Nicotiana tabacum HOM05D003294 ORTHO05D004060 5.4e-22 108.2 103 56.3
MBI08_g05488_MAGBIO Magnolia biondii HOM05D003294 ORTHO05D004060 1.2e-21 107.1 108 53.7
MBI08_g20550_MAGBIO Magnolia biondii HOM05D003294 ORTHO05D004060 1.2e-21 107.1 108 53.7
unitig_578.g16248 Utricularia gibba HOM05D003294 ORTHO05D004060 2.7e-21 105.9 105 53.3
MSTRG.24590 Avicennia marina HOM05D003294 ORTHO05D004060 3.5e-21 105.5 108 52.8
PSO675G6401 Papaver somniferum HOM05D003294 ORTHO05D004060 1.3e-20 103.6 109 49.5
Lsat_1_v5_gn_2_51341 Lactuca sativa HOM05D003294 ORTHO05D004060 2.3e-20 102.8 110 54.5
PSO478G2289 Papaver somniferum HOM05D003294 ORTHO05D004060 2.3e-20 102.8 110 48.2
HanXRQChr03g0075661 Helianthus annuus HOM05D003294 ORTHO05D004060 3.0e-20 102.4 109 51.4
Lsat_1_v5_gn_2_51640 Lactuca sativa HOM05D003294 ORTHO05D004060 3.9e-20 102.1 110 54.5
ATR0743G132 Amborella trichopoda HOM05D003294 ORTHO05D004060 6.6e-20 101.3 109 50.5
Lsat_1_v5_gn_2_51461 Lactuca sativa HOM05D003294 ORTHO05D004060 6.6e-20 101.3 109 51.4
HanXRQChr14g0437091 Helianthus annuus HOM05D003294 ORTHO05D004060 1.1e-19 100.5 109 50.5
PSO017G4822 Papaver somniferum HOM05D003294 ORTHO05D004060 4.3e-19 98.6 109 49.5
RcHm_v2.0_Chr4g0408821 Rosa chinensis HOM05D003294 ORTHO05D004060 7.3e-19 97.8 85 57.6
BcaC01g05257 Brassica carinata HOM05D003294 ORTHO05D004060 9.6e-19 97.4 83 60.2
Lsat_1_v5_gn_2_50521 Lactuca sativa HOM05D003294 ORTHO05D004060 9.6e-19 97.4 110 52.7
ECA238G3164 Erigeron canadensis HOM05D003294 ORTHO05D004060 1.3e-18 97.1 109 50.5
HanXRQChr14g0437071 Helianthus annuus HOM05D003294 ORTHO05D004060 1.6e-18 96.7 107 51.4
Peaxi162Scf00323g00620 Petunia axillaris HOM05D003294 ORTHO05D004060 2.6e-16 89.4 72 62.5
vmacro00571 Vaccinium macrocarpon HOM05D003294 ORTHO05D004060 2.2e-15 86.3 67 62.7
SEGI_35656 Sequoiadendron giganteum HOM05D003294 ORTHO05D004060 3.8e-15 85.5 112 42.9
Psat0s3952g0080 Pisum sativum HOM05D003294 ORTHO05D004060 1.2e-13 80.5 101 48.5
Lj2g0020959 Lotus japonicus HOM05D003294 ORTHO05D004060 3.0e-12 75.9 52 71.2
Dinv22670 Davidia involucrata HOM05D003294 ORTHO05D004060 3.9e-12 75.5 107 45.8
Nitab4.5_0000978g0120 Nicotiana tabacum HOM05D003294 ORTHO05D004060 1.5e-11 73.6 69 55.1
Aqoxy1G02134 Aquilegia oxysepala HOM05D003294 ORTHO05D004060 1.7e-07 60.1 72 44.4


User provided reference genes

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