Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.3M52EB Arachis hypogaea HOM05D007174 ORTHO05D010441 3.6e-97 358.2 180 100.0
arahy.Tifrunner.gnm1.ann1.S3TC9P Arachis hypogaea HOM05D008392 ORTHO05D010441 1.2e-39 167.2 95 89.5
arahy.Tifrunner.gnm1.ann1.DRX87E Arachis hypogaea HOM05D008392 ORTHO05D010441 4.5e-39 165.2 95 88.4
arahy.Tifrunner.gnm1.ann1.AW02WS Arachis hypogaea HOM05D007174 ORTHO05D009061 1.2e-10 70.9 64 62.5
arahy.Tifrunner.gnm1.ann1.CGP099 Arachis hypogaea HOM05D007174 ORTHO05D009061 1.2e-10 70.9 64 62.5
Eucgr.K00215 Eucalyptus grandis HOM05D007174 ORTHO05D009061 2.6e-10 69.7 64 60.9
Medtr6g465290 Medicago truncatula HOM05D007174 ORTHO05D009061 5.8e-10 68.6 64 60.9
Lalb_Chr19g0131081 Lupinus albus HOM05D007174 ORTHO05D009061 1.3e-09 67.4 46 73.9
MD01G1195800 Malus domestica HOM05D007174 ORTHO05D009061 1.3e-09 67.4 62 58.1
TPR.G9185 Trifolium pratense HOM05D007174 ORTHO05D009061 2.2e-09 66.6 46 71.7
PGR142G4376 Punica granatum HOM05D007174 ORTHO05D009061 4.9e-09 65.5 41 75.6
Prupe.2G289100 Prunus persica HOM05D007174 ORTHO05D009061 6.4e-09 65.1 60 56.7
Haze_13772 Corylus avellana HOM05D007174 ORTHO05D009061 8.3e-09 64.7 64 56.2
Glyma.16G199500 Glycine max HOM05D007174 ORTHO05D009061 8.3e-09 64.7 64 54.7
Phvul.004G122400 Phaseolus vulgaris HOM05D007174 ORTHO05D009061 8.3e-09 64.7 40 77.5
arahy.Tifrunner.gnm1.ann1.09T8EW Arachis hypogaea HOM05D007174 ORTHO05D009061 1.1e-08 64.3 64 57.8
QL09p015458 Quercus lobata HOM05D007174 ORTHO05D009061 1.9e-08 63.5 39 76.9
VMungo0464G0116 Vigna mungo HOM05D007174 ORTHO05D009061 1.9e-08 63.5 44 70.5
Glyma.09G147500 Glycine max HOM05D007174 ORTHO05D009061 3.2e-08 62.8 40 75.0
CANSAT21G1580 Cannabis sativa HOM05D007174 ORTHO05D009061 4.1e-08 62.4 38 73.7
DCAR_018153 Daucus carota HOM05D007174 ORTHO05D009061 4.1e-08 62.4 60 55.0
Psat1g105240 Pisum sativum HOM05D007174 ORTHO05D009061 4.1e-08 62.4 41 70.7
Thecc.03G169500 Theobroma cacao HOM05D007174 ORTHO05D009061 5.4e-08 62.0 64 54.7
arahy.Tifrunner.gnm1.ann1.JY00AE Arachis hypogaea HOM05D007174 ORTHO05D009061 7.0e-08 61.6 55 58.2
Dinv35170 Davidia involucrata HOM05D007174 ORTHO05D009061 7.0e-08 61.6 60 55.0
Lj6g0017578 Lotus japonicus HOM05D007174 ORTHO05D009061 7.0e-08 61.6 63 55.6
RcHm_v2.0_Chr1g0376581 Rosa chinensis HOM05D007174 ORTHO05D009061 7.0e-08 61.6 62 51.6
Lj2g0011010 Lotus japonicus HOM05D007174 ORTHO05D009061 9.2e-08 61.2 63 55.6
MBI04_g40843_MAGBIO Magnolia biondii HOM05D007174 ORTHO05D009061 9.2e-08 61.2 64 53.1
Cpa.g.sc3.335 Carica papaya HOM05D007174 ORTHO05D009061 1.6e-07 60.5 44 65.9
TAR374G0585 Trochodendron aralioides HOM05D007174 ORTHO05D009061 1.6e-07 60.5 64 53.1
COL.COLO4_14250 Corchorus olitorius HOM05D000059 ORTHO05D005093 2.0e-07 60.1 64 51.6
Dinv28496 Davidia involucrata HOM05D000059 ORTHO05D005093 2.0e-07 60.1 44 63.6
CiPaw.04G068400 Carya illinoinensis HOM05D007174 ORTHO05D009061 3.5e-07 59.3 40 72.5
Duzib205G1938 Durio zibethinus HOM05D007174 ORTHO05D009061 6.0e-07 58.5 64 50.0
Nn1g01328 Nelumbo nucifera HOM05D007174 ORTHO05D009061 7.8e-07 58.2 50 60.0
FAN10G2932 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.0e-06 57.8 62 48.4
FAN01G2691 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.3e-06 57.4 62 48.4
Rhsim09G0195900 Rhododendron simsii HOM05D007174 ORTHO05D009061 1.3e-06 57.4 62 53.2
Atru.chr1.537 Acer truncatum HOM05D007174 ORTHO05D009061 1.7e-06 57.0 60 51.7
ATR0757G135 Amborella trichopoda HOM05D007174 ORTHO05D009061 1.7e-06 57.0 61 49.2
CSS0008795 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 1.7e-06 57.0 62 50.0
CSS0029278 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 1.7e-06 57.0 62 50.0
CSS0030546 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 1.7e-06 57.0 62 50.0
ClCG05G007760 Citrullus lanatus HOM05D002642 ORTHO05D002834 1.7e-06 57.0 60 50.0
FAN03G1635 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.7e-06 57.0 62 48.4
FAN06G1461 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.7e-06 57.0 62 48.4
Potri.012G134500 Populus trichocarpa HOM05D007174 ORTHO05D009061 1.7e-06 57.0 64 51.6
Sed0014335 Sechium edule HOM05D002642 ORTHO05D002834 1.7e-06 57.0 60 51.7
vmacro09863 Vaccinium macrocarpon HOM05D007174 ORTHO05D009061 1.7e-06 57.0 44 63.6
Zm00001eb187200 Zea mays HOM05D007174 ORTHO05D009061 1.7e-06 57.0 44 63.6
CSS0030220 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 2.3e-06 56.6 44 59.1
Cc02_g03460 Coffea canephora HOM05D007174 ORTHO05D009061 2.3e-06 56.6 60 50.0
Lj1A990G55 Lonicera japonica HOM05D007174 ORTHO05D009061 2.3e-06 56.6 64 50.0
TWI23G0481 Tripterygium wilfordii HOM05D007174 ORTHO05D009061 2.3e-06 56.6 64 51.6
CARHR275910 Cardamine hirsuta HOM05D007174 ORTHO05D009061 3.0e-06 56.2 60 51.7
Sabra12G0101100 Salix brachista HOM05D007174 ORTHO05D009061 3.0e-06 56.2 40 67.5
FAN03G3394 Fragaria x ananassa HOM05D000059 ORTHO05D005093 3.9e-06 55.8 62 46.8
Aqoxy7G00468 Aquilegia oxysepala HOM05D007174 ORTHO05D009061 5.0e-06 55.5 59 54.2
Ciclev10005753m.g Citrus clementina HOM05D007174 ORTHO05D009061 5.0e-06 55.5 60 50.0
FvH4_7g28911 Fragaria vesca HOM05D007174 ORTHO05D009061 5.0e-06 55.5 62 48.4
Sopen03g005220 Solanum pennellii HOM05D007174 ORTHO05D009061 5.0e-06 55.5 44 56.8
MELO3C006867.2 Cucumis melo HOM05D007174 ORTHO05D009061 6.6e-06 55.1 36 66.7
CsaV3_3G016740 Cucumis sativus L. HOM05D007174 ORTHO05D009061 6.6e-06 55.1 36 66.7
Os02g0677600 Oryza sativa ssp. japonica HOM05D007174 ORTHO05D009061 6.6e-06 55.1 64 48.4
Gohir.A12G261100 Gossypium hirsutum HOM05D007174 ORTHO05D009061 8.6e-06 54.7 64 48.4
Gohir.D12G262000 Gossypium hirsutum HOM05D007174 ORTHO05D009061 8.6e-06 54.7 64 48.4
Gorai.008G280800 Gossypium raimondii HOM05D007174 ORTHO05D009061 8.6e-06 54.7 64 48.4


User provided reference genes

Program Settings