Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.3JZK2J Arachis hypogaea HOM05D006137 ORTHO05D007697 7.9e-200 700.3 362 100.0
arahy.Tifrunner.gnm1.ann1.J91B8N Arachis hypogaea HOM05D006137 ORTHO05D007697 7.9e-200 700.3 362 100.0
Glyma.01G014900 Glycine max HOM05D006137 ORTHO05D007697 5.0e-154 548.1 318 85.8
VMungo1215G0535 Vigna mungo HOM05D006137 ORTHO05D007697 1.1e-153 547.0 321 83.5
Lalb_Chr09g0325501 Lupinus albus HOM05D006137 ORTHO05D007697 1.5e-153 546.6 371 75.5
Medtr5g029550 Medicago truncatula HOM05D006137 ORTHO05D007697 5.5e-153 544.7 335 80.6
Phvul.002G137400 Phaseolus vulgaris HOM05D006137 ORTHO05D007697 2.1e-152 542.7 318 83.6
Lj3g0008594 Lotus japonicus HOM05D006137 ORTHO05D007697 8.0e-152 540.8 371 74.4
TPR.G19427 Trifolium pratense HOM05D006137 ORTHO05D007697 1.8e-151 539.7 313 82.7
Psat2g138120 Pisum sativum HOM05D006137 ORTHO05D007697 5.2e-143 511.5 314 79.6
MD06G1026400 Malus domestica HOM05D006137 ORTHO05D007697 3.6e-136 488.8 314 75.8
Gohir.D12G208800 Gossypium hirsutum HOM05D006137 ORTHO05D007697 1.0e-135 487.3 318 74.8
Gohir.A12G206400 Gossypium hirsutum HOM05D006137 ORTHO05D007697 6.8e-135 484.6 318 74.2
Gorai.008G224300 Gossypium raimondii HOM05D006137 ORTHO05D007697 1.2e-134 483.8 318 74.2
Dinv25255 Davidia involucrata HOM05D006137 ORTHO05D007697 2.0e-134 483.0 317 74.8
CSS0021967 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 3.4e-134 482.3 342 69.3
Potri.003G096600 Populus trichocarpa HOM05D006137 ORTHO05D007697 4.4e-134 481.9 316 75.0
Thecc.03G309800 Theobroma cacao HOM05D006137 ORTHO05D007697 8.3e-133 477.6 366 67.2
TWI15G1160 Tripterygium wilfordii HOM05D006137 ORTHO05D007697 1.8e-132 476.5 310 75.5
COL.COLO4_16947 Corchorus olitorius HOM05D006137 ORTHO05D007697 7.0e-132 474.6 297 77.4
FAN08G1929 Fragaria x ananassa HOM05D006137 ORTHO05D007697 4.5e-131 471.9 310 72.9
Ciclev10001458m.g Citrus clementina HOM05D006137 ORTHO05D007697 5.9e-131 471.5 317 72.6
Duzib068G1414 Durio zibethinus HOM05D006137 ORTHO05D007697 7.8e-131 471.1 331 70.7
Sabra03G0065200 Salix brachista HOM05D006137 ORTHO05D007697 1.7e-130 469.9 302 76.2
RcHm_v2.0_Chr7g0211741 Rosa chinensis HOM05D006137 ORTHO05D007697 2.3e-130 469.5 310 71.9
FvH4_5g23010 Fragaria vesca HOM05D006137 ORTHO05D007697 2.9e-130 469.2 310 72.3
CsaV3_3G001380 Cucumis sativus L. HOM05D006137 ORTHO05D007697 6.6e-130 468.0 314 72.0
CANSAT21G0809 Cannabis sativa HOM05D006137 ORTHO05D007697 1.5e-129 466.8 309 75.1
FAN04G0555 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.9e-129 466.5 310 71.6
MELO3C013825.2 Cucumis melo HOM05D006137 ORTHO05D007697 3.3e-129 465.7 314 72.0
CANSAT21G0548 Cannabis sativa HOM05D006137 ORTHO05D007697 5.6e-129 464.9 309 74.8
CiPaw.11G098100 Carya illinoinensis HOM05D006137 ORTHO05D007697 5.6e-129 464.9 317 72.2
CSS0050317 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 7.3e-129 464.5 302 73.2
Nn3g19394 Nelumbo nucifera HOM05D006137 ORTHO05D007697 7.3e-129 464.5 309 72.8
BcaB06g28845 Brassica carinata HOM05D006137 ORTHO05D007697 3.6e-128 462.2 316 71.2
AT2G35500 Arabidopsis thaliana HOM05D006137 ORTHO05D007697 4.7e-128 461.8 316 71.2
BraA04t18192Z Brassica rapa HOM05D006137 ORTHO05D007697 1.8e-127 459.9 316 70.9
FAN18G2668 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.8e-127 459.9 301 72.8
AL4G31550 Arabidopsis lyrata HOM05D006137 ORTHO05D007697 2.3e-127 459.5 317 70.3
Carub.0004s1719 Capsella rubella HOM05D006137 ORTHO05D007697 3.0e-127 459.1 316 70.6
FvH4_2g06760 Fragaria vesca HOM05D006137 ORTHO05D007697 4.0e-127 458.8 308 71.1
A04p26930 Brassica napus HOM05D006137 ORTHO05D007697 5.2e-127 458.4 316 70.3
C04p64320 Brassica napus HOM05D006137 ORTHO05D007697 5.2e-127 458.4 316 70.3
Atru.chr6.1520 Acer truncatum HOM05D006137 ORTHO05D007697 6.8e-127 458.0 304 74.0
PGR042G0393 Punica granatum HOM05D006137 ORTHO05D007697 6.8e-127 458.0 320 69.1
CARHR129650 Cardamine hirsuta HOM05D006137 ORTHO05D007697 1.2e-126 457.2 316 70.9
Thhalv10016768m.g Eutrema salsugineum HOM05D006137 ORTHO05D007697 1.2e-126 457.2 316 70.9
BolC4t27919H Brassica oleracea HOM05D006137 ORTHO05D007697 1.5e-126 456.8 316 70.6
FAN13G2862 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.5e-126 456.8 327 68.5
TAR629G2895 Trochodendron aralioides HOM05D006137 ORTHO05D007697 2.2e-125 453.0 319 69.6
FAN18G2637 Fragaria x ananassa HOM05D006137 ORTHO05D007697 6.4e-125 451.4 345 64.9
Sp4g17720 Schrenkiella parvula HOM05D006137 ORTHO05D007697 6.4e-125 451.4 316 69.3
Aqoxy2G03876 Aquilegia oxysepala HOM05D006137 ORTHO05D007697 2.4e-124 449.5 309 68.6
GSVIVG01013108001 Vitis vinifera HOM05D006137 ORTHO05D007697 5.4e-124 448.4 317 68.5
Sed0022354 Sechium edule HOM05D006137 ORTHO05D007697 1.7e-122 443.4 314 69.1
Hma1.2p1_1027F.1_g249480 Hydrangea macrophylla HOM05D006137 ORTHO05D007697 3.9e-122 442.2 355 62.3
Rhsim11G0021000 Rhododendron simsii HOM05D006137 ORTHO05D007697 6.6e-122 441.4 336 67.0
ClCG10G001310 Citrullus lanatus HOM05D006137 ORTHO05D007697 8.6e-122 441.0 373 60.9
BcaC02g07708 Brassica carinata HOM05D006137 ORTHO05D007697 3.3e-121 439.1 298 71.5
PSO782G3150 Papaver somniferum HOM05D006137 ORTHO05D007697 3.1e-119 432.6 320 65.0
EL10Ac2g03238 Beta vulgaris HOM05D006137 ORTHO05D007697 3.4e-118 429.1 301 69.8
Peaxi162Scf00170g00615 Petunia axillaris HOM05D006137 ORTHO05D007697 4.4e-118 428.7 373 59.0
Cc08_g03270 Coffea canephora HOM05D006137 ORTHO05D007697 5.8e-118 428.3 361 60.9
ECA233G6209 Erigeron canadensis HOM05D006137 ORTHO05D007697 1.7e-117 426.8 316 66.1
Nitab4.5_0002190g0020 Nicotiana tabacum HOM05D006137 ORTHO05D007697 2.2e-117 426.4 322 65.8
PSO063G4597 Papaver somniferum HOM05D006137 ORTHO05D007697 3.2e-116 422.5 321 64.8
DCAR_008226 Daucus carota HOM05D006137 ORTHO05D007697 4.1e-116 422.2 301 69.4
Solyc08g076410.4 Solanum lycopersicum HOM05D006137 ORTHO05D007697 9.2e-116 421.0 310 65.8
Sopen08g024990 Solanum pennellii HOM05D006137 ORTHO05D007697 9.2e-116 421.0 310 65.8
PGSC0003DMG400014792 Solanum tuberosum HOM05D006137 ORTHO05D007697 1.2e-115 420.6 310 65.8
Ah.09g233490 Amaranthus hybridus HOM05D006137 ORTHO05D007697 1.3e-114 417.2 361 58.7
THA.LOC104814417 Tarenaya hassleriana HOM05D006137 ORTHO05D007697 1.3e-114 417.2 317 65.3
HanXRQChr04g0098961 Helianthus annuus HOM05D006137 ORTHO05D007697 1.7e-114 416.8 316 65.8
CAN.G726.20 Capsicum annuum HOM05D006137 ORTHO05D007697 3.0e-114 416.0 310 63.9
Aa31LG9G15490 Aethionema arabicum HOM05D006137 ORTHO05D007697 1.9e-113 413.3 266 75.6
Oeu017078.1 Olea europaea HOM05D006137 ORTHO05D007697 2.8e-112 409.5 301 65.4
Os10g0577700 Oryza sativa ssp. japonica HOM05D006137 ORTHO05D007697 1.7e-109 400.2 315 62.2
FAN24G0436 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.9e-109 399.4 284 68.0
CDE06G2536 Ceratophyllum demersum HOM05D006137 ORTHO05D007697 8.3e-109 397.9 324 60.8
Sc24g0002950 Simmondsia chinensis HOM05D006137 ORTHO05D007697 1.1e-108 397.5 293 67.9
Nitab4.5_0003416g0030 Nicotiana tabacum HOM05D006137 ORTHO05D007697 1.9e-108 396.7 347 58.8
MSTRG.24846 Avicennia marina HOM05D006137 ORTHO05D007697 2.4e-108 396.4 312 63.1
QL12p001513 Quercus lobata HOM05D006137 ORTHO05D007697 9.2e-108 394.4 294 67.0
Prupe.5G028300 Prunus persica HOM05D006137 ORTHO05D007697 1.6e-107 393.7 312 64.1
Lsat_1_v5_gn_6_3681 Lactuca sativa HOM05D006137 ORTHO05D007697 1.0e-106 391.0 321 62.6
vmacro08163 Vaccinium macrocarpon HOM05D006137 ORTHO05D007697 1.3e-106 390.6 272 70.2
HPP92_014848 Vanilla planifolia HOM05D006137 ORTHO05D007697 1.7e-106 390.2 302 62.3
unitig_748.g7545 Utricularia gibba HOM05D006137 ORTHO05D007697 8.6e-106 387.9 317 60.9
Migut.A01172 Erythranthe guttata HOM05D006137 ORTHO05D007697 5.6e-105 385.2 320 63.4
Eucgr.E00233 Eucalyptus grandis HOM05D006137 ORTHO05D007697 1.2e-102 377.5 293 63.8
Zm00001eb025030 Zea mays HOM05D006137 ORTHO05D007697 7.6e-102 374.8 308 59.1
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 5.2e-95 352.1 281 64.1
ATR0829G218 Amborella trichopoda HOM05D006137 ORTHO05D007697 6.9e-95 351.7 277 63.5
Oeu019613.1 Olea europaea HOM05D006137 ORTHO05D007697 7.1e-92 341.7 275 61.8
FAN20G1935 Fragaria x ananassa HOM05D006137 ORTHO05D007697 4.6e-91 339.0 308 58.1
Lj2A232T29 Lonicera japonica HOM05D006137 ORTHO05D007697 4.6e-91 339.0 327 56.0
SEGI_14560 Sequoiadendron giganteum HOM05D006137 ORTHO05D007697 3.9e-90 335.9 303 55.1
Oeu002327.1 Olea europaea HOM05D006137 ORTHO05D007697 1.3e-88 330.9 225 70.2
Haze_08142 Corylus avellana HOM05D006137 ORTHO05D007697 7.6e-86 321.6 462 43.9
Oeu019614.1 Olea europaea HOM05D006137 ORTHO05D007697 7.6e-86 321.6 275 59.6
Mapoly0006s0263 Marchantia polymorpha HOM05D006137 ORTHO05D007697 6.7e-82 308.5 307 48.9
Ca_25185_v3 Cicer arietinum L. HOM05D006137 ORTHO05D007697 2.5e-81 306.6 230 70.0
Eucgr.E00231 Eucalyptus grandis HOM05D006137 ORTHO05D007697 1.2e-78 297.7 268 57.5
Pp3c12_17740 Physcomitrium patens HOM05D006137 ORTHO05D007697 1.7e-77 293.9 314 46.5
SMO228G0118 Selaginella moellendorffii HOM05D006137 ORTHO05D007697 7.1e-76 288.5 304 47.0
AagrBONN_evm.TU.Sc2ySwM_344.1996 Anthoceros agrestis HOM05D006137 ORTHO05D007697 2.5e-68 263.5 303 42.9
Manes.15G185701 Manihot esculenta HOM05D006137 ORTHO05D007697 8.7e-66 255.0 217 60.8
Hund09822 Selenicereus undatus HOM05D006137 ORTHO05D007697 3.8e-61 239.6 148 79.7
AUR62002644 Chenopodium quinoa HOM05D006137 ORTHO05D007697 3.2e-60 236.5 167 70.7
C03p78000 Brassica napus HOM05D006137 ORTHO05D007697 3.9e-50 203.0 156 65.4
BolC1t02019H Brassica oleracea HOM05D006137 ORTHO05D007697 1.3e-45 188.0 221 49.3
Glyma.07G152633 Glycine max HOM05D006137 ORTHO05D007697 1.3e-45 188.0 112 82.1
Oeu033557.2 Olea europaea HOM05D006137 ORTHO05D007697 1.7e-45 187.6 157 58.0
AUR62002645 Chenopodium quinoa HOM05D006137 ORTHO05D007697 5.5e-44 182.6 133 64.7
AUR62040998 Chenopodium quinoa HOM05D006137 ORTHO05D007697 8.0e-43 178.7 136 62.5
C01p20920 Brassica napus HOM05D006137 ORTHO05D007697 2.3e-42 177.2 221 47.5
Hund09821 Selenicereus undatus HOM05D006137 ORTHO05D000006 5.2e-42 176.0 129 62.8
BolC3t20061H Brassica oleracea HOM05D006137 ORTHO05D007697 3.3e-41 173.3 166 56.6
CBR_g18978 Chara braunii HOM05D006137 ORTHO05D007697 1.7e-32 144.4 186 45.7
MCO11G470 Micromonas commoda HOM05D006137 ORTHO05D007697 2.8e-32 143.7 201 39.8
Medtr1g009450 Medicago truncatula HOM05D006137 ORTHO05D007697 5.5e-28 129.4 86 73.3
AUR62040999 Chenopodium quinoa HOM05D006137 ORTHO05D007697 7.2e-28 129.0 112 63.4
PRCOL_00002339 Prasinoderma coloniale HOM05D006137 ORTHO05D007697 2.4e-23 114.0 198 34.3
BcaC09g50780 Brassica carinata HOM05D006137 ORTHO05D007697 4.3e-12 76.6 97 47.4
C02p41610 Brassica napus HOM05D006137 ORTHO05D007697 2.8e-11 73.9 37 83.8
BolC2t10179H Brassica oleracea HOM05D006137 ORTHO05D007697 2.8e-11 73.9 37 83.8
BolC2t11174H Brassica oleracea HOM05D006137 ORTHO05D007697 3.4e-09 67.0 31 87.1
Mapoly0089s0033 Marchantia polymorpha HOM05D002058 ORTHO05D003758 3.5e-06 57.0 144 31.2


User provided reference genes

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