Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.3J1SD9 Arachis hypogaea HOM05D007699 ORTHO05D009796 1.5e-95 352.8 172 100.0
EL10Ac6g13349 Beta vulgaris HOM05D007699 ORTHO05D009796 7.4e-15 84.7 89 51.7
Manes.11G145650 Manihot esculenta HOM05D007699 ORTHO05D009796 7.4e-15 84.7 62 67.7
Potri.011G103301 Populus trichocarpa HOM05D007699 ORTHO05D009796 7.4e-15 84.7 59 66.1
Potri.011G103401 Populus trichocarpa HOM05D007699 ORTHO05D009796 2.8e-14 82.8 59 67.8
TPR.G12299 Trifolium pratense HOM05D007699 ORTHO05D009796 2.8e-14 82.8 50 72.0
TPR.G38695 Trifolium pratense HOM05D000020 ORTHO05D000543 2.8e-14 82.8 52 76.9
QL03p053410 Quercus lobata HOM05D007699 ORTHO05D009796 3.7e-14 82.4 43 88.4
Medtr3g084270 Medicago truncatula HOM05D007699 ORTHO05D009796 4.8e-14 82.0 43 88.4
FvH4_3g13700 Fragaria vesca HOM05D007699 ORTHO05D009796 6.3e-14 81.6 58 70.7
C03p91420 Brassica napus HOM05D007699 ORTHO05D009796 8.2e-14 81.3 40 90.0
Carub.0003s1340 Capsella rubella HOM05D007699 ORTHO05D009796 8.2e-14 81.3 41 90.2
Medtr3g105890 Medicago truncatula HOM05D007699 ORTHO05D009796 8.2e-14 81.3 51 78.4
FAN11G1327 Fragaria x ananassa HOM05D007699 ORTHO05D009796 1.1e-13 80.9 50 78.0
Hma1.2p1_0886F.1_g232660 Hydrangea macrophylla HOM05D007699 ORTHO05D009796 1.1e-13 80.9 42 85.7
Hma1.2p1_0886F.1_g232685 Hydrangea macrophylla HOM05D007699 ORTHO05D009796 1.1e-13 80.9 42 85.7
arahy.Tifrunner.gnm1.ann1.3C01L3 Arachis hypogaea HOM05D007699 ORTHO05D009796 1.4e-13 80.5 41 90.2
FAN18G1300 Fragaria x ananassa HOM05D005738 ORTHO05D007135 1.4e-13 80.5 36 100.0
FAN18G3749 Fragaria x ananassa HOM05D005738 ORTHO05D007135 1.4e-13 80.5 36 100.0
Mapoly0086s0020 Marchantia polymorpha HOM05D007699 ORTHO05D009796 1.4e-13 80.5 46 84.8
Phvul.001G084100 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 1.4e-13 80.5 36 100.0
Prupe.7G069600 Prunus persica HOM05D007699 ORTHO05D009796 1.4e-13 80.5 43 86.0
Prupe.7G080000 Prunus persica HOM05D007699 ORTHO05D009796 1.4e-13 80.5 36 100.0
A05p18230 Brassica napus HOM05D007699 ORTHO05D009796 1.8e-13 80.1 40 90.0
CARHR185520 Cardamine hirsuta HOM05D007699 ORTHO05D009796 2.4e-13 79.7 36 97.2
FAN08G2016 Fragaria x ananassa HOM05D007699 ORTHO05D009796 2.4e-13 79.7 55 67.3
Phvul.008G062500 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 2.4e-13 79.7 36 97.2
FAN11G3494 Fragaria x ananassa HOM05D007699 ORTHO05D009796 3.1e-13 79.3 49 77.6
EL10Ac6g13683 Beta vulgaris HOM05D007699 ORTHO05D009796 4.1e-13 79.0 67 62.7
CARHR088640 Cardamine hirsuta HOM05D007699 ORTHO05D009796 4.1e-13 79.0 35 100.0
Migut.J00839 Erythranthe guttata HOM05D007699 ORTHO05D009796 4.1e-13 79.0 43 86.0
FAN13G3199 Fragaria x ananassa HOM05D007699 ORTHO05D009796 4.1e-13 79.0 35 100.0
Gohir.D06G068332 Gossypium hirsutum HOM05D007699 ORTHO05D009796 4.1e-13 79.0 40 87.5
Nitab4.5_0005352g0040 Nicotiana tabacum HOM05D007699 ORTHO05D009796 4.1e-13 79.0 35 100.0
Phvul.001G066900 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 4.1e-13 79.0 35 100.0
Sopen12g028800 Solanum pennellii HOM05D007699 ORTHO05D009796 4.1e-13 79.0 35 100.0
FAN08G0324 Fragaria x ananassa HOM05D007699 ORTHO05D009796 5.3e-13 78.6 35 100.0
Mapoly0020s0143 Marchantia polymorpha HOM05D007699 ORTHO05D009796 5.3e-13 78.6 67 59.7
Phvul.001G066700 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 6.9e-13 78.2 36 97.2
EL10Ac6g13624 Beta vulgaris HOM05D007699 ORTHO05D009796 2.0e-12 76.6 41 85.4
Pp3c1_6540 Physcomitrium patens HOM05D007699 ORTHO05D009796 2.6e-12 76.3 37 91.9
GSVIVG01037330001 Vitis vinifera HOM05D007699 ORTHO05D009796 2.6e-12 76.3 41 85.4
Solyc12g056290.2 Solanum lycopersicum HOM05D007699 ORTHO05D009796 3.4e-12 75.9 35 97.1
TPR.G32688 Trifolium pratense HOM05D007699 ORTHO05D009796 3.4e-12 75.9 51 72.5
Pp3c15_10810 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.9e-12 75.1 58 67.2
Pp3c15_10813 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.9e-12 75.1 58 67.2
Pp3c15_10820 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.9e-12 75.1 58 67.2
Ciclev10018283m.g Citrus clementina HOM05D007699 ORTHO05D009796 7.7e-12 74.7 38 89.5
Ah.10g036850 Amaranthus hybridus HOM05D007699 ORTHO05D009796 1.7e-11 73.6 38 89.5
Gorai.010G079800 Gossypium raimondii HOM05D007699 ORTHO05D009796 2.2e-11 73.2 38 86.8
Thecc.10G037500 Theobroma cacao HOM05D007699 ORTHO05D009796 2.2e-11 73.2 51 70.6
EL10Ac6g13685 Beta vulgaris HOM05D007699 ORTHO05D009796 2.9e-11 72.8 35 94.3
Medtr8g461450 Medicago truncatula HOM05D007699 ORTHO05D009796 2.9e-11 72.8 33 100.0
CSS0021910 Camellia sinensis var. sinensis HOM05D007699 ORTHO05D009796 5.0e-11 72.0 58 62.1
CSS0023756 Camellia sinensis var. sinensis HOM05D007699 ORTHO05D009796 6.5e-11 71.6 53 66.0
Carub.0006s3371 Capsella rubella HOM05D007699 ORTHO05D009796 8.5e-11 71.2 38 86.8
Pp3c10_15080 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.1e-10 70.9 35 91.4
Pp3c10_15084 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.1e-10 70.9 35 91.4
Pp3s1006_30 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.1e-10 70.9 35 91.4
Pp3s638_22 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.1e-10 70.9 35 91.4
Pp3s677_10 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.1e-10 70.9 35 91.4
Pp3s677_11 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.1e-10 70.9 35 91.4
EL10Ac6g13623 Beta vulgaris HOM05D007699 ORTHO05D009796 1.4e-10 70.5 31 100.0
EL10Ac6g13684 Beta vulgaris HOM05D007699 ORTHO05D009796 1.4e-10 70.5 34 94.1
Gorai.011G262200 Gossypium raimondii HOM05D007699 ORTHO05D009796 1.4e-10 70.5 32 96.9
Nn7g36904 Nelumbo nucifera HOM05D007699 ORTHO05D009796 1.4e-10 70.5 31 100.0
Potri.005G055534 Populus trichocarpa HOM05D007699 ORTHO05D009796 1.4e-10 70.5 32 96.9
Phvul.001G090500 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 1.9e-10 70.1 36 88.9
Pp3s677_20 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.9e-10 70.1 61 62.3
Potri.005G055667 Populus trichocarpa HOM05D007699 ORTHO05D009796 1.9e-10 70.1 32 96.9
Gohir.A11G277350 Gossypium hirsutum HOM05D007699 ORTHO05D009796 3.2e-10 69.3 32 96.9
Pp3c24_6960 Physcomitrium patens HOM05D007699 ORTHO05D009796 3.2e-10 69.3 35 88.6
Pp3c24_6961 Physcomitrium patens HOM05D007699 ORTHO05D009796 3.2e-10 69.3 35 88.6
Medtr3g108610 Medicago truncatula HOM05D007699 ORTHO05D009796 4.2e-10 68.9 32 96.9
arahy.Tifrunner.gnm1.ann1.C3EWW9 Arachis hypogaea HOM05D007699 ORTHO05D009796 7.2e-10 68.2 33 93.9
SHI29091 Sapria himalayana HOM05D007699 ORTHO05D009796 7.2e-10 68.2 33 93.9
Glyma.19G099100 Glycine max HOM05D007699 ORTHO05D009796 9.4e-10 67.8 31 96.8
FAN11G3758 Fragaria x ananassa HOM05D007699 ORTHO05D009796 1.6e-09 67.0 30 100.0
FAN18G1871 Fragaria x ananassa HOM05D007699 ORTHO05D009796 1.6e-09 67.0 30 100.0
Gorai.011G262800 Gossypium raimondii HOM05D007699 ORTHO05D009796 1.6e-09 67.0 30 100.0
Pp3c21_2000 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.6e-09 67.0 38 81.6
Pp3c21_2022 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.6e-09 67.0 38 81.6
PGSC0003DMG400029597 Solanum tuberosum HOM05D000312 ORTHO05D000221 1.6e-09 67.0 30 100.0
Phvul.009G076400 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 2.1e-09 66.6 31 93.5
Pp3c1_26810 Physcomitrium patens HOM05D007699 ORTHO05D009796 2.1e-09 66.6 31 96.8
Pp3c1_26830 Physcomitrium patens HOM05D007699 ORTHO05D009796 2.1e-09 66.6 31 96.8
EL10Ac6g13625 Beta vulgaris HOM05D007699 ORTHO05D009796 6.1e-09 65.1 41 78.0
EL10Ac6g13621 Beta vulgaris HOM05D007699 ORTHO05D009796 5.2e-08 62.0 36 77.8
Medtr2g101670 Medicago truncatula HOM05D007699 ORTHO05D009796 1.5e-07 60.5 33 81.8
Pp3c24_16090 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.5e-07 60.5 41 65.9
Pp3c24_16091 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.5e-07 60.5 41 65.9
Medtr6g070990 Medicago truncatula HOM05D007699 ORTHO05D009796 9.7e-07 57.8 26 100.0
Pp3c27_1930 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.7e-06 57.0 35 71.4
SHI28974 Sapria himalayana HOM05D007699 ORTHO05D009796 2.2e-06 56.6 36 75.0


User provided reference genes

Program Settings