Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.3IU0NQ Arachis hypogaea HOM05D007731 ORTHO05D008483 9.4e-105 383.6 210 100.0
arahy.Tifrunner.gnm1.ann1.WY2XWP Arachis hypogaea HOM05D007731 ORTHO05D008483 4.1e-100 368.2 210 96.7
Psat0s2878g0040 Pisum sativum HOM05D007731 ORTHO05D008483 1.1e-23 114.4 208 45.7
Lj1g0026139 Lotus japonicus HOM05D007731 ORTHO05D008483 4.1e-23 112.5 252 42.1
Glyma.04G023500 Glycine max HOM05D007731 ORTHO05D008483 5.9e-22 108.6 226 42.9
Phvul.009G009600 Phaseolus vulgaris HOM05D007731 ORTHO05D008483 1.3e-21 107.5 207 44.4
TPR.G34549 Trifolium pratense HOM05D007731 ORTHO05D008483 3.8e-21 105.9 211 45.5
VMungo1309G0548 Vigna mungo HOM05D007731 ORTHO05D008483 3.8e-21 105.9 222 41.4
Duzib093G0569 Durio zibethinus HOM05D007731 ORTHO05D008483 6.5e-21 105.1 216 42.6
Lalb_Chr23g0266081 Lupinus albus HOM05D007731 ORTHO05D008483 1.1e-20 104.4 206 40.3
Glyma.06G023400 Glycine max HOM05D007731 ORTHO05D008483 6.1e-19 98.6 214 38.3
ClCG08G014190 Citrullus lanatus HOM05D007731 ORTHO05D008483 7.9e-19 98.2 185 43.8
Medtr3g113660 Medicago truncatula HOM05D007731 ORTHO05D008483 7.9e-19 98.2 208 40.4
Thecc.08G047100 Theobroma cacao HOM05D007731 ORTHO05D008483 1.0e-18 97.8 178 43.3
Cpa.g.sc26.305 Carica papaya HOM05D007731 ORTHO05D008483 6.7e-18 95.1 159 45.3
Dinv39536 Davidia involucrata HOM05D007731 ORTHO05D008483 1.1e-17 94.4 162 45.7
CSS0037397 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 2.5e-17 93.2 219 39.7
Prupe.1G363100 Prunus persica HOM05D007731 ORTHO05D008483 4.3e-17 92.4 245 36.3
QL02p012129 Quercus lobata HOM05D007731 ORTHO05D008483 1.3e-16 90.9 190 40.5
Nn6g32002 Nelumbo nucifera HOM05D007731 ORTHO05D008483 1.7e-16 90.5 208 38.5
TAR628G0423 Trochodendron aralioides HOM05D007731 ORTHO05D008483 1.7e-16 90.5 164 43.9
ECA233G0921 Erigeron canadensis HOM05D007731 ORTHO05D008483 2.2e-16 90.1 203 39.4
Gorai.009G193400 Gossypium raimondii HOM05D007731 ORTHO05D008483 2.2e-16 90.1 186 39.8
CANSAT25G3722 Cannabis sativa HOM05D007731 ORTHO05D008483 2.8e-16 89.7 220 37.7
Cc00_g29330 Coffea canephora HOM05D007731 ORTHO05D008483 3.7e-16 89.4 191 37.2
Gohir.A05G185300 Gossypium hirsutum HOM05D007731 ORTHO05D008483 4.8e-16 89.0 263 35.0
Potri.005G241800 Populus trichocarpa HOM05D007731 ORTHO05D008483 4.8e-16 89.0 129 50.4
Hma1.2p1_0733F.1_g210180 Hydrangea macrophylla HOM05D007731 ORTHO05D008483 8.2e-16 88.2 182 42.9
Gohir.D05G188100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.4e-15 87.4 183 39.3
Potri.002G019700 Populus trichocarpa HOM05D007731 ORTHO05D008483 2.4e-15 86.7 193 37.3
COL.COLO4_26124 Corchorus olitorius HOM05D007731 ORTHO05D008483 3.1e-15 86.3 173 43.4
TAR376G0482 Trochodendron aralioides HOM05D007731 ORTHO05D008483 3.1e-15 86.3 160 42.5
CSS0046256 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 2.0e-14 83.6 211 37.4
Ca_15482_v3 Cicer arietinum L. HOM05D007731 ORTHO05D008483 2.0e-14 83.6 107 55.1
Gorai.002G122700 Gossypium raimondii HOM05D007731 ORTHO05D008483 2.0e-14 83.6 194 36.6
Sabra02G0016000 Salix brachista HOM05D007731 ORTHO05D008483 2.0e-14 83.6 200 37.0
RcHm_v2.0_Chr6g0303181 Rosa chinensis HOM05D007731 ORTHO05D008483 2.6e-14 83.2 242 34.7
CSS0005102 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 3.4e-14 82.8 211 37.4
CSS0031900 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 4.5e-14 82.4 220 38.2
Ciclev10002425m.g Citrus clementina HOM05D007731 ORTHO05D008483 5.9e-14 82.0 131 50.4
Nn5g30769 Nelumbo nucifera HOM05D007731 ORTHO05D008483 5.9e-14 82.0 121 43.0
CiPaw.07G147300 Carya illinoinensis HOM05D007731 ORTHO05D008483 1.0e-13 81.3 184 38.6
MSTRG.25262 Avicennia marina HOM05D007731 ORTHO05D008483 1.3e-13 80.9 207 35.7
Haze_22661 Corylus avellana HOM05D007731 ORTHO05D008483 1.3e-13 80.9 122 45.9
Eucgr.H00961 Eucalyptus grandis HOM05D007731 ORTHO05D008483 1.3e-13 80.9 176 37.5
Gohir.D01G097000 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.3e-13 80.9 194 36.1
Cfa013976 Carpinus fangiana HOM05D007731 ORTHO05D008483 1.7e-13 80.5 124 46.8
CiPaw.08G067400 Carya illinoinensis HOM05D007731 ORTHO05D008483 1.7e-13 80.5 107 50.5
Gohir.A01G110400 Gossypium hirsutum HOM05D007731 ORTHO05D008483 2.2e-13 80.1 131 43.5
TWI56G0526 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 3.8e-13 79.3 159 42.1
Sabra05G0187200 Salix brachista HOM05D007731 ORTHO05D008483 5.0e-13 79.0 139 45.3
DCAR_013881 Daucus carota HOM05D007731 ORTHO05D008483 1.1e-12 77.8 138 42.0
Manes.05G145300 Manihot esculenta HOM05D007731 ORTHO05D008483 1.4e-12 77.4 250 34.4
Sed0013309 Sechium edule HOM05D007731 ORTHO05D008483 1.4e-12 77.4 184 38.6
Manes.18G011966 Manihot esculenta HOM05D007731 ORTHO05D008483 4.2e-12 75.9 232 34.5
TWI12G0892 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 4.2e-12 75.9 161 41.0
CsaV3_2G024250 Cucumis sativus L. HOM05D007731 ORTHO05D008483 7.2e-12 75.1 184 38.6
FAN27G0472 Fragaria x ananassa HOM05D007731 ORTHO05D008483 7.2e-12 75.1 130 45.4
FAN15G0282 Fragaria x ananassa HOM05D007731 ORTHO05D008483 9.4e-12 74.7 126 44.4
FvH4_2g38210 Fragaria vesca HOM05D007731 ORTHO05D008483 1.6e-11 73.9 126 44.4
FAN20G0947 Fragaria x ananassa HOM05D007731 ORTHO05D008483 2.7e-11 73.2 162 38.3
THA.LOC104811421 Tarenaya hassleriana HOM05D009961 ORTHO05D008483 2.7e-11 73.2 163 44.2
PSO541G3821 Papaver somniferum HOM05D007731 ORTHO05D008483 3.6e-11 72.8 92 48.9
Lj4P799T27 Lonicera japonica HOM05D007731 ORTHO05D008483 6.1e-11 72.0 245 33.5
PGR031G1853 Punica granatum HOM05D007731 ORTHO05D008483 6.1e-11 72.0 221 35.3
Actinidia15437 Actinidia chinensis HOM05D007731 ORTHO05D008483 1.4e-10 70.9 204 35.8
Actinidia16998 Actinidia chinensis HOM05D007731 ORTHO05D008483 1.8e-10 70.5 224 33.0
BraA07t29330Z Brassica rapa HOM05D009961 ORTHO05D008483 2.3e-10 70.1 211 32.7
A07p16020 Brassica napus HOM05D009961 ORTHO05D008483 3.0e-10 69.7 211 31.8
Sopen04g035340 Solanum pennellii HOM05D007731 ORTHO05D008483 3.0e-10 69.7 119 44.5
AT1G20070 Arabidopsis thaliana HOM05D009961 ORTHO05D008483 3.9e-10 69.3 146 34.9
Lsat_1_v5_gn_8_30081 Lactuca sativa HOM05D007731 ORTHO05D008483 3.9e-10 69.3 127 41.7
Lalb_Chr19g0131461 Lupinus albus HOM05D007731 ORTHO05D008483 3.9e-10 69.3 171 37.4
Migut.C00858 Erythranthe guttata HOM05D007731 ORTHO05D008483 5.1e-10 68.9 151 39.7
PGSC0003DMG400009876 Solanum tuberosum HOM05D007731 ORTHO05D008483 5.1e-10 68.9 46 84.8
BcaB03g14337 Brassica carinata HOM05D009961 ORTHO05D008483 8.8e-10 68.2 212 33.0
Aqoxy6G02285 Aquilegia oxysepala HOM05D007731 ORTHO05D008483 1.5e-09 67.4 171 38.6
Carub.0001s1960 Capsella rubella HOM05D009961 ORTHO05D008483 2.0e-09 67.0 145 40.0
BraA06t24726Z Brassica rapa HOM05D009961 ORTHO05D008483 2.6e-09 66.6 46 65.2
BolC7t42871H Brassica oleracea HOM05D009961 ORTHO05D008483 5.7e-09 65.5 222 31.1
Gohir.A02G083100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 5.7e-09 65.5 229 33.6
Rhsim06G0016400 Rhododendron simsii HOM05D007731 ORTHO05D008483 5.7e-09 65.5 104 46.2
BcaC05g25901 Brassica carinata HOM05D009961 ORTHO05D008483 7.4e-09 65.1 143 35.7
C05p18560 Brassica napus HOM05D009961 ORTHO05D008483 7.4e-09 65.1 143 35.7
BolC5t30567H Brassica oleracea HOM05D009961 ORTHO05D008483 7.4e-09 65.1 143 35.7
BcaB07g32022 Brassica carinata HOM05D009961 ORTHO05D008483 9.7e-09 64.7 148 36.5
AL1G32880 Arabidopsis lyrata HOM05D009961 ORTHO05D008483 1.3e-08 64.3 142 34.5
Gohir.D02G098500 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.3e-08 64.3 227 33.9
Rhsim06G0019700 Rhododendron simsii HOM05D007731 ORTHO05D008483 2.2e-08 63.5 104 46.2
Sc15g0004830 Simmondsia chinensis HOM05D007731 ORTHO05D008483 2.2e-08 63.5 150 38.7
A06p16220 Brassica napus HOM05D009961 ORTHO05D008483 4.8e-08 62.4 142 35.9
BcaC07g39017 Brassica carinata HOM05D009961 ORTHO05D008483 8.2e-08 61.6 47 61.7
C08p19900 Brassica napus HOM05D009961 ORTHO05D008483 8.2e-08 61.6 47 61.7
BolC8t49628H Brassica oleracea HOM05D009961 ORTHO05D008483 8.2e-08 61.6 47 61.7
Gorai.005G112400 Gossypium raimondii HOM05D007731 ORTHO05D008483 1.1e-07 61.2 227 33.5
unitig_749.g13899 Utricularia gibba HOM05D007731 ORTHO05D008483 1.1e-07 61.2 180 33.9
CARHR020550 Cardamine hirsuta HOM05D009961 ORTHO05D008483 1.4e-07 60.8 207 30.0
CsaV3_3G045970 Cucumis sativus L. HOM05D007731 ORTHO05D008483 1.8e-07 60.5 188 34.6
Thhalv10008606m.g Eutrema salsugineum HOM05D009961 ORTHO05D008483 2.4e-07 60.1 144 35.4
MELO3C003742.2 Cucumis melo HOM05D007731 ORTHO05D008483 3.1e-07 59.7 200 31.0
ClCG05G015580 Citrullus lanatus HOM05D007731 ORTHO05D008483 7.0e-07 58.5 179 38.5
AUR62041477 Chenopodium quinoa HOM05D007731 ORTHO05D008483 9.1e-07 58.2 50 68.0
MBI18_g10965_MAGBIO Magnolia biondii HOM05D001921 ORTHO05D001784 1.2e-06 57.8 136 36.8
Aa31LG7G4510 Aethionema arabicum HOM05D009961 ORTHO05D008483 1.5e-06 57.4 160 38.8
Sp1g17840 Schrenkiella parvula HOM05D009961 ORTHO05D008483 7.7e-06 55.1 144 33.3


User provided reference genes

Program Settings