Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.3IH7MW Arachis hypogaea HOM05D013667 ORTHO05D005932 3.2e-89 332.0 208 100.0
arahy.Tifrunner.gnm1.ann1.G7V7VG Arachis hypogaea HOM05D013667 ORTHO05D005932 8.2e-85 317.4 208 97.1
Phvul.002G169000 Phaseolus vulgaris HOM05D013667 ORTHO05D005932 7.3e-25 118.2 203 44.3
Medtr4g082330 Medicago truncatula HOM05D013667 ORTHO05D005932 1.4e-23 114.0 208 50.5
Ca_23884_v3 Cicer arietinum L. HOM05D013667 ORTHO05D005932 1.8e-23 113.6 206 41.7
Glyma.20G031200 Glycine max HOM05D013667 ORTHO05D005932 5.3e-23 112.1 214 43.0
TPR.G34048 Trifolium pratense HOM05D013667 ORTHO05D005932 7.6e-22 108.2 213 45.5
Lalb_Chr09g0329161 Lupinus albus HOM05D013667 ORTHO05D005932 3.2e-20 102.8 101 65.3
QL03p069741 Quercus lobata HOM05D009095 ORTHO05D005932 4.6e-19 99.0 113 54.0
CiPaw.06G088700 Carya illinoinensis HOM05D009095 ORTHO05D005932 1.0e-18 97.8 204 35.8
Haze_11958 Corylus avellana HOM05D009095 ORTHO05D005932 3.0e-18 96.3 103 54.4
Dinv34096 Davidia involucrata HOM05D009095 ORTHO05D005932 3.9e-18 95.9 212 37.3
Psat7g135800 Pisum sativum HOM05D013667 ORTHO05D005932 3.9e-18 95.9 109 55.0
VMungo0251G1037 Vigna mungo HOM05D013667 ORTHO05D005932 5.1e-18 95.5 174 40.2
Lj4g0019858 Lotus japonicus HOM05D013667 ORTHO05D005932 5.6e-17 92.0 119 57.1
TAR006G0004 Trochodendron aralioides HOM05D009095 ORTHO05D005932 2.8e-16 89.7 120 46.7
CANSAT54G2635 Cannabis sativa HOM05D009095 ORTHO05D005932 4.0e-15 85.9 126 43.7
vmacro01343 Vaccinium macrocarpon HOM05D009095 ORTHO05D005932 5.8e-14 82.0 101 53.5
Manes.05G106200 Manihot esculenta HOM05D009095 ORTHO05D005932 1.1e-12 77.8 142 38.0
Ciclev10032785m.g Citrus clementina HOM05D009095 ORTHO05D005932 2.4e-12 76.6 224 31.7
Thecc.02G339500 Theobroma cacao HOM05D009095 ORTHO05D005932 5.4e-12 75.5 101 48.5
TWI56G0627 Tripterygium wilfordii HOM05D009095 ORTHO05D005932 7.1e-12 75.1 208 29.3
COL.COLO4_27972 Corchorus olitorius HOM05D009095 ORTHO05D005932 4.6e-11 72.4 142 40.8
Duzib251G0477 Durio zibethinus HOM05D009095 ORTHO05D005932 5.1e-10 68.9 97 45.4
Dinv38746 Davidia involucrata HOM05D008369 ORTHO05D005932 2.5e-09 66.6 139 38.1
Migut.L01243 Erythranthe guttata HOM05D009095 ORTHO05D005932 2.1e-08 63.5 109 41.3
Peaxi162Scf00408g00521 Petunia axillaris HOM05D020902 ORTHO05D005932 6.2e-08 62.0 140 35.0
Dinv10658 Davidia involucrata HOM05D008369 ORTHO05D005932 1.1e-07 61.2 124 37.1
HanXRQChr08g0210661 Helianthus annuus HOM05D009095 ORTHO05D005932 4.0e-07 59.3 110 41.8
Cc11_g12580 Coffea canephora HOM05D020902 ORTHO05D005932 1.2e-06 57.8 140 32.9
Gohir.A12G163200 Gossypium hirsutum HOM05D009095 ORTHO05D005932 1.2e-06 57.8 139 33.1
Gohir.D12G166200 Gossypium hirsutum HOM05D009095 ORTHO05D005932 2.0e-06 57.0 139 34.5
CSS0001536 Camellia sinensis var. sinensis HOM05D008369 ORTHO05D005932 3.4e-06 56.2 98 43.9
QL03p069756 Quercus lobata HOM05D012615 ORTHO05D005932 3.4e-06 56.2 92 43.5
PGR102G2341 Punica granatum HOM05D009095 ORTHO05D005932 4.5e-06 55.8 71 47.9
Carub.0005s0227 Capsella rubella HOM05D012098 ORTHO05D005932 7.6e-06 55.1 101 38.6


User provided reference genes

Program Settings