Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.3FYK03 Arachis hypogaea HOM05D005359 ORTHO05D006431 1.3e-120 436.4 218 100.0
arahy.Tifrunner.gnm1.ann1.8TZ9EP Arachis hypogaea HOM05D005359 ORTHO05D006431 7.1e-87 324.3 266 66.9
arahy.Tifrunner.gnm1.ann1.HK0KDN Arachis hypogaea HOM05D005359 ORTHO05D006431 4.6e-86 321.6 266 66.5
Glyma.15G046900 Glycine max HOM05D005359 ORTHO05D006431 3.0e-77 292.4 266 59.4
Glyma.08G185900 Glycine max HOM05D005359 ORTHO05D006431 5.1e-77 291.6 266 59.8
Lalb_Chr20g0123431 Lupinus albus HOM05D005359 ORTHO05D006431 7.3e-76 287.7 266 58.3
VMungo0540G0616 Vigna mungo HOM05D005359 ORTHO05D006431 1.4e-74 283.5 266 57.5
Lj6g0011599 Lotus japonicus HOM05D005359 ORTHO05D006431 5.2e-74 281.6 266 58.3
Lj4g0002358 Lotus japonicus HOM05D005359 ORTHO05D006431 8.9e-74 280.8 266 58.3
Prupe.1G568000 Prunus persica HOM05D005359 ORTHO05D006431 4.4e-73 278.5 266 56.4
PGR042G0198 Punica granatum HOM05D005359 ORTHO05D006431 2.2e-72 276.2 269 53.5
Glyma.05G169600 Glycine max HOM05D005359 ORTHO05D006431 4.9e-72 275.0 266 57.1
Phvul.002G250300 Phaseolus vulgaris HOM05D005359 ORTHO05D006431 1.9e-71 273.1 266 56.4
COL.COLO4_17869 Corchorus olitorius HOM05D005359 ORTHO05D006431 3.2e-71 272.3 269 54.6
Glyma.08G127900 Glycine max HOM05D005359 ORTHO05D006431 4.2e-71 271.9 266 56.8
MD08G1228700 Malus domestica HOM05D005359 ORTHO05D006431 4.2e-71 271.9 266 54.5
Duzib052G1228 Durio zibethinus HOM05D005359 ORTHO05D006431 9.3e-71 270.8 269 55.0
Thecc.02G038700 Theobroma cacao HOM05D005359 ORTHO05D006431 9.3e-71 270.8 269 54.6
Ciclev10001293m.g Citrus clementina HOM05D005359 ORTHO05D006431 1.2e-70 270.4 266 54.9
Manes.07G015400 Manihot esculenta HOM05D005359 ORTHO05D006431 1.2e-70 270.4 269 54.3
VMungo0251G3193 Vigna mungo HOM05D005359 ORTHO05D006431 2.7e-70 269.2 266 56.4
GSVIVG01022967001 Vitis vinifera HOM05D005359 ORTHO05D006431 3.5e-70 268.9 232 61.6
Gorai.008G042100 Gossypium raimondii HOM05D005359 ORTHO05D006431 4.6e-70 268.5 266 54.9
Gohir.D01G169300 Gossypium hirsutum HOM05D005359 ORTHO05D006431 6.0e-70 268.1 269 54.3
Gorai.002G210900 Gossypium raimondii HOM05D005359 ORTHO05D006431 6.0e-70 268.1 269 54.3
Gohir.D12G040400 Gossypium hirsutum HOM05D005359 ORTHO05D006431 1.0e-69 267.3 266 54.9
TPR.G2126 Trifolium pratense HOM05D005359 ORTHO05D006431 1.0e-69 267.3 266 55.3
CiPaw.06G147600 Carya illinoinensis HOM05D005359 ORTHO05D006431 1.3e-69 266.9 266 53.4
MD15G1422700 Malus domestica HOM05D005359 ORTHO05D006431 1.3e-69 266.9 266 54.9
Cpa.g.sc113.63 Carica papaya HOM05D005359 ORTHO05D006431 5.1e-69 265.0 266 53.0
CiPaw.05G044000 Carya illinoinensis HOM05D005359 ORTHO05D006431 6.6e-69 264.6 266 53.8
Gohir.A01G178400 Gossypium hirsutum HOM05D005359 ORTHO05D006431 6.6e-69 264.6 307 50.2
Gohir.A12G031900 Gossypium hirsutum HOM05D005359 ORTHO05D006431 1.1e-68 263.8 266 53.8
RcHm_v2.0_Chr7g0222501 Rosa chinensis HOM05D005359 ORTHO05D006431 1.5e-68 263.5 266 53.4
Medtr2g007220 Medicago truncatula HOM05D005359 ORTHO05D006431 1.9e-68 263.1 266 54.1
Psat2g122240 Pisum sativum HOM05D005359 ORTHO05D006431 1.9e-68 263.1 266 53.8
Cfa005525 Carpinus fangiana HOM05D005359 ORTHO05D006431 2.5e-68 262.7 266 53.8
Ca_00078_v3 Cicer arietinum L. HOM05D005359 ORTHO05D006431 2.5e-68 262.7 266 54.1
Haze_01666 Corylus avellana HOM05D005359 ORTHO05D006431 2.5e-68 262.7 266 53.8
Potri.003G019400 Populus trichocarpa HOM05D005359 ORTHO05D006431 3.3e-68 262.3 269 53.5
Dinv19364 Davidia involucrata HOM05D005359 ORTHO05D006431 9.6e-68 260.8 266 54.1
Eucgr.I02722 Eucalyptus grandis HOM05D005359 ORTHO05D006431 1.3e-67 260.4 266 52.6
Sabra03G0010900 Salix brachista HOM05D005359 ORTHO05D006431 2.1e-67 259.6 269 53.2
CANSAT11G0924 Cannabis sativa HOM05D005359 ORTHO05D006431 4.8e-67 258.5 266 52.6
CANSAT11G2649 Cannabis sativa HOM05D005359 ORTHO05D006431 2.4e-66 256.1 266 51.9
QL08p043348 Quercus lobata HOM05D005359 ORTHO05D006431 2.4e-66 256.1 265 52.5
Potri.001G210800 Populus trichocarpa HOM05D005359 ORTHO05D006431 3.1e-66 255.8 269 52.4
Sabra01G0162800 Salix brachista HOM05D005359 ORTHO05D006431 3.1e-66 255.8 269 51.7
Sed0010360 Sechium edule HOM05D005359 ORTHO05D006431 1.2e-65 253.8 266 51.5
FvH4_5g29550 Fragaria vesca HOM05D005359 ORTHO05D006431 2.6e-65 252.7 266 51.9
FAN18G3183 Fragaria x ananassa HOM05D005359 ORTHO05D006431 2.6e-65 252.7 266 51.9
CSS0002632 Camellia sinensis var. sinensis HOM05D005359 ORTHO05D006431 3.4e-65 252.3 266 53.4
THA.LOC104809588 Tarenaya hassleriana HOM05D005359 ORTHO05D006431 3.4e-65 252.3 266 52.6
FAN08G1144 Fragaria x ananassa HOM05D005359 ORTHO05D006431 5.8e-65 251.5 266 51.9
CSS0043414 Camellia sinensis var. sinensis HOM05D005359 ORTHO05D006431 4.9e-64 248.4 266 52.6
TWI14G1253 Tripterygium wilfordii HOM05D005359 ORTHO05D006431 8.4e-64 247.7 266 51.1
DCAR_013987 Daucus carota HOM05D005359 ORTHO05D006431 1.1e-63 247.3 266 50.8
Phvul.006G214300 Phaseolus vulgaris HOM05D005359 ORTHO05D006431 1.1e-63 247.3 190 68.4
TWI23G0911 Tripterygium wilfordii HOM05D005359 ORTHO05D006431 2.4e-63 246.1 266 50.8
THA.LOC104819321 Tarenaya hassleriana HOM05D005359 ORTHO05D006431 3.2e-63 245.7 266 50.8
FAN13G1157 Fragaria x ananassa HOM05D005359 ORTHO05D006431 4.2e-63 245.4 266 50.4
Lj5A252T45 Lonicera japonica HOM05D005359 ORTHO05D006431 4.2e-63 245.4 266 51.5
Rhsim11G0129700 Rhododendron simsii HOM05D005359 ORTHO05D006431 4.2e-63 245.4 266 50.8
AUR62002965 Chenopodium quinoa HOM05D005359 ORTHO05D006431 5.4e-63 245.0 271 50.2
Dinv24279 Davidia involucrata HOM05D005359 ORTHO05D006431 5.4e-63 245.0 266 51.9
EL10Ac6g14556 Beta vulgaris HOM05D005359 ORTHO05D006431 7.1e-63 244.6 266 51.1
Nn5g28206 Nelumbo nucifera HOM05D005359 ORTHO05D006431 1.6e-62 243.4 266 50.8
vmacro01763 Vaccinium macrocarpon HOM05D005359 ORTHO05D006431 1.6e-62 243.4 266 50.4
AUR62007773 Chenopodium quinoa HOM05D005359 ORTHO05D006431 3.5e-62 242.3 271 49.8
Peaxi162Scf00011g00352 Petunia axillaris HOM05D005359 ORTHO05D006431 6.0e-62 241.5 266 50.4
Hund05788 Selenicereus undatus HOM05D005359 ORTHO05D006431 6.0e-62 241.5 271 49.1
TAR376G0200 Trochodendron aralioides HOM05D005359 ORTHO05D006431 1.3e-61 240.4 266 50.8
Aa31LG1G4050 Aethionema arabicum HOM05D005359 ORTHO05D006431 3.0e-61 239.2 266 50.0
Cc02_g22460 Coffea canephora HOM05D005359 ORTHO05D006431 8.7e-61 237.7 266 48.9
Lsat_1_v5_gn_5_109981 Lactuca sativa HOM05D005359 ORTHO05D006431 1.1e-60 237.3 267 49.8
Hma1.2p1_0217F.1_g092010 Hydrangea macrophylla HOM05D005359 ORTHO05D006431 3.3e-60 235.7 250 52.8
Oeu008891.1 Olea europaea HOM05D005359 ORTHO05D006431 7.4e-60 234.6 266 49.6
Nitab4.5_0007420g0030 Nicotiana tabacum HOM05D005359 ORTHO05D006431 2.1e-59 233.0 266 50.4
MSTRG.5231 Avicennia marina HOM05D005359 ORTHO05D006431 2.8e-59 232.6 266 48.9
Sc16g0001650 Simmondsia chinensis HOM05D005359 ORTHO05D006431 2.8e-59 232.6 266 50.0
ClCG09G014240 Citrullus lanatus HOM05D005359 ORTHO05D006431 3.6e-59 232.3 266 47.7
Thhalv10007703m.g Eutrema salsugineum HOM05D005359 ORTHO05D006431 1.8e-58 229.9 266 48.5
Sp1g09480 Schrenkiella parvula HOM05D005359 ORTHO05D006431 2.4e-58 229.6 266 48.5
Thecc.02G038500 Theobroma cacao HOM05D005359 ORTHO05D006431 4.0e-58 228.8 269 47.2
SalBow6G6401 Salvia bowleyana HOM05D005359 ORTHO05D006431 5.3e-58 228.4 266 49.2
AL1G21710 Arabidopsis lyrata HOM05D005359 ORTHO05D006431 1.2e-57 227.3 266 49.2
AT1G10780 Arabidopsis thaliana HOM05D005359 ORTHO05D006431 1.2e-57 227.3 266 48.1
Ah.03g138120 Amaranthus hybridus HOM05D005359 ORTHO05D006431 2.0e-57 226.5 246 49.6
CsaV3_6G037270 Cucumis sativus L. HOM05D005359 ORTHO05D006431 2.0e-57 226.5 266 47.4
CAN.G1577.14 Capsicum annuum HOM05D005359 ORTHO05D006431 4.5e-57 225.3 266 49.6
MELO3C014388.2 Cucumis melo HOM05D005359 ORTHO05D006431 1.3e-56 223.8 262 48.1
Solyc01g104230.4 Solanum lycopersicum HOM05D005359 ORTHO05D006431 1.7e-56 223.4 266 48.1
CARHR011000 Cardamine hirsuta HOM05D005359 ORTHO05D006431 2.9e-56 222.6 266 48.1
Lalb_Chr07g0185731 Lupinus albus HOM05D005359 ORTHO05D006431 2.9e-56 222.6 266 47.4
HanXRQChr16g0514561 Helianthus annuus HOM05D005359 ORTHO05D006431 6.4e-56 221.5 266 48.1
Sopen01g046670 Solanum pennellii HOM05D005359 ORTHO05D006431 6.4e-56 221.5 266 47.7
A09p64680 Brassica napus HOM05D005359 ORTHO05D006431 8.4e-56 221.1 266 47.4
BraA09t41824Z Brassica rapa HOM05D005359 ORTHO05D006431 8.4e-56 221.1 266 47.4
HanXRQChr10g0289981 Helianthus annuus HOM05D005359 ORTHO05D006431 1.1e-55 220.7 266 47.0
BolC8t52390H Brassica oleracea HOM05D005359 ORTHO05D006431 3.2e-55 219.2 266 46.6
PGSC0003DMG400023758 Solanum tuberosum HOM05D005359 ORTHO05D006431 3.2e-55 219.2 266 47.7
ECA234G2063 Erigeron canadensis HOM05D005359 ORTHO05D006431 5.5e-55 218.4 266 46.6
C08p48500 Brassica napus HOM05D005359 ORTHO05D006431 7.1e-55 218.0 266 46.2
Aqoxy5G02275 Aquilegia oxysepala HOM05D005359 ORTHO05D006431 9.3e-55 217.6 266 47.0
Os09g0454300 Oryza sativa ssp. japonica HOM05D005359 ORTHO05D006431 9.3e-55 217.6 136 72.8
Carub.0001s1033 Capsella rubella HOM05D005359 ORTHO05D006431 2.1e-54 216.5 266 46.2
Migut.N01041 Erythranthe guttata HOM05D005359 ORTHO05D006431 4.6e-54 215.3 264 46.2
HanXRQChr06g0169581 Helianthus annuus HOM05D005359 ORTHO05D006431 6.0e-54 214.9 266 45.5
SGA_v2.0_scaffold292G47368 Striga asiatica HOM05D005359 ORTHO05D006431 6.0e-54 214.9 253 47.8
DCAR_031890 Daucus carota HOM05D005359 ORTHO05D006431 3.0e-53 212.6 129 80.6
MBI06_g20718_MAGBIO Magnolia biondii HOM05D005359 ORTHO05D006431 3.0e-53 212.6 266 44.0
TAR628G1654 Trochodendron aralioides HOM05D005359 ORTHO05D006431 3.0e-53 212.6 163 65.6
unitig_26.g9020 Utricularia gibba HOM05D005359 ORTHO05D006431 2.5e-52 209.5 266 46.2
Zm00001eb176520 Zea mays HOM05D005359 ORTHO05D006431 1.2e-49 200.7 136 71.3
ATR0193G009 Amborella trichopoda HOM05D005359 ORTHO05D006431 1.3e-48 197.2 170 60.0
Os08g0469500 Oryza sativa ssp. japonica HOM05D005359 ORTHO05D006431 1.3e-48 197.2 175 57.1
Sed0018525 Sechium edule HOM05D005359 ORTHO05D006431 3.8e-48 195.7 269 41.3
Nitab4.5_0002245g0060 Nicotiana tabacum HOM05D005359 ORTHO05D006431 1.1e-47 194.1 266 44.7
Zm00001eb037840 Zea mays HOM05D005359 ORTHO05D006431 3.2e-47 192.6 136 67.6
Zm00001eb100430 Zea mays HOM05D005359 ORTHO05D006431 2.7e-46 189.5 121 71.1
Mapoly0113s0005 Marchantia polymorpha HOM05D005359 ORTHO05D006431 4.2e-39 165.6 256 37.9
Oeu033126.1 Olea europaea HOM05D005359 ORTHO05D006431 2.1e-38 163.3 166 53.6
ECA236G4790 Erigeron canadensis HOM05D005359 ORTHO05D006431 3.3e-36 156.0 120 65.0
BcaC05g24954 Brassica carinata HOM05D005359 ORTHO05D006431 7.4e-36 154.8 136 58.8
CDE11G1073 Ceratophyllum demersum HOM05D005359 ORTHO05D006431 3.3e-28 129.4 214 39.3
SMO169G0280 Selaginella moellendorffii HOM05D005359 ORTHO05D006431 1.7e-27 127.1 256 31.6
Atru.chr6.646 Acer truncatum HOM05D005359 ORTHO05D006431 3.1e-26 122.9 89 64.0
Lsat_1_v5_gn_4_48740 Lactuca sativa HOM05D005359 ORTHO05D006431 1.5e-20 104.0 228 32.9
AagrBONN_evm.TU.Sc2ySwM_117.2184 Anthoceros agrestis HOM05D005359 ORTHO05D006431 9.1e-18 94.7 209 32.1
arahy.Tifrunner.gnm1.ann1.F717DE Arachis hypogaea HOM05D005359 ORTHO05D006431 2.1e-14 83.6 65 66.2
arahy.Tifrunner.gnm1.ann1.94J17Q Arachis hypogaea HOM05D005359 ORTHO05D006431 2.7e-14 83.2 38 100.0
arahy.Tifrunner.gnm1.ann1.B308TG Arachis hypogaea HOM05D005359 ORTHO05D006431 2.7e-14 83.2 38 100.0
arahy.Tifrunner.gnm1.ann1.HDLM7U Arachis hypogaea HOM05D005359 ORTHO05D006431 2.7e-14 83.2 38 100.0
arahy.Tifrunner.gnm1.ann1.X0Q2J1 Arachis hypogaea HOM05D005359 ORTHO05D006431 2.7e-14 83.2 38 100.0
arahy.Tifrunner.gnm1.ann1.BYQ4G2 Arachis hypogaea HOM05D005359 ORTHO05D006431 1.4e-13 80.9 65 64.6
arahy.Tifrunner.gnm1.ann1.E0G9L5 Arachis hypogaea HOM05D005359 ORTHO05D006431 8.8e-13 78.2 38 94.7
Oeu056678.1 Olea europaea HOM05D005359 ORTHO05D006431 2.2e-08 63.5 94 39.4
Dinv24276 Davidia involucrata HOM05D005359 ORTHO05D006431 1.6e-06 57.4 41 65.9


User provided reference genes

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