Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.3F6PU2 Arachis hypogaea HOM05D005400 ORTHO05D006668 3.8e-93 344.7 166 100.0
arahy.Tifrunner.gnm1.ann1.FE5R37 Arachis hypogaea HOM05D005400 ORTHO05D006668 3.5e-62 241.9 145 83.4
arahy.Tifrunner.gnm1.ann1.E9FCC2 Arachis hypogaea HOM05D005400 ORTHO05D006668 8.7e-37 157.5 108 74.1
arahy.Tifrunner.gnm1.ann1.B3EP0P Arachis hypogaea HOM05D005400 ORTHO05D006668 1.3e-35 153.7 123 67.5
Psat6g194880 Pisum sativum HOM05D005400 ORTHO05D006668 6.9e-34 147.9 108 68.5
TPR.G7748 Trifolium pratense HOM05D005400 ORTHO05D006668 3.4e-33 145.6 107 69.2
Glyma.10G227900 Glycine max HOM05D005400 ORTHO05D006668 1.1e-31 140.6 108 68.5
Lj5g0007861 Lotus japonicus HOM05D005400 ORTHO05D006668 2.5e-31 139.4 92 73.9
Medtr1g099370 Medicago truncatula HOM05D005400 ORTHO05D006668 3.2e-31 139.0 107 64.5
Glyma.20G164400 Glycine max HOM05D005400 ORTHO05D006668 4.2e-31 138.7 108 67.6
Phvul.007G077600 Phaseolus vulgaris HOM05D005400 ORTHO05D006668 7.1e-31 137.9 108 67.6
CANSAT21G0517 Cannabis sativa HOM05D005400 ORTHO05D006668 9.3e-31 137.5 108 64.8
QL09p011755 Quercus lobata HOM05D005400 ORTHO05D006668 1.6e-30 136.7 106 67.9
VMungo0720G2624 Vigna mungo HOM05D005400 ORTHO05D006668 1.6e-30 136.7 108 65.7
SalBow4G2614 Salvia bowleyana HOM05D005400 ORTHO05D006668 4.6e-30 135.2 107 63.6
Lalb_Chr06g0161421 Lupinus albus HOM05D005400 ORTHO05D006668 7.9e-30 134.4 108 63.0
Aa31LG3G9160 Aethionema arabicum HOM05D005400 ORTHO05D006668 1.8e-29 133.3 106 62.3
ClCG01G000730 Citrullus lanatus HOM05D005400 ORTHO05D006668 1.8e-29 133.3 107 63.6
Thhalv10012488m.g Eutrema salsugineum HOM05D005400 ORTHO05D006668 2.3e-29 132.9 106 63.2
Nn1g01753 Nelumbo nucifera HOM05D005400 ORTHO05D006668 2.3e-29 132.9 106 62.3
Cpa.g.sc3.16 Carica papaya HOM05D005400 ORTHO05D006668 3.9e-29 132.1 104 64.4
CiPaw.05G259500 Carya illinoinensis HOM05D005400 ORTHO05D006668 3.9e-29 132.1 106 64.2
AT5G52910 Arabidopsis thaliana HOM05D005400 ORTHO05D006668 6.7e-29 131.3 106 62.3
Sed0025455 Sechium edule HOM05D005400 ORTHO05D006668 6.7e-29 131.3 107 61.7
MELO3C005855.2 Cucumis melo HOM05D005400 ORTHO05D006668 8.7e-29 131.0 107 62.6
CsaV3_5G000860 Cucumis sativus L. HOM05D005400 ORTHO05D006668 8.7e-29 131.0 107 62.6
Dinv35292 Davidia involucrata HOM05D005400 ORTHO05D006668 8.7e-29 131.0 106 61.3
Carub.0008s1311 Capsella rubella HOM05D005400 ORTHO05D006668 1.1e-28 130.6 106 61.3
Cfa016337 Carpinus fangiana HOM05D005400 ORTHO05D006668 1.1e-28 130.6 106 64.2
MBI06_g29320_MAGBIO Magnolia biondii HOM05D005400 ORTHO05D006668 1.5e-28 130.2 105 61.9
CAN.G108.2 Capsicum annuum HOM05D005400 ORTHO05D006668 1.9e-28 129.8 107 62.6
FvH4_7g30740 Fragaria vesca HOM05D005400 ORTHO05D006668 1.9e-28 129.8 105 61.9
GSVIVG01028757001 Vitis vinifera HOM05D005400 ORTHO05D006668 2.5e-28 129.4 107 61.7
AL8G27410 Arabidopsis lyrata HOM05D005400 ORTHO05D006668 3.3e-28 129.0 106 61.3
PGR042G3191 Punica granatum HOM05D005400 ORTHO05D006668 3.3e-28 129.0 106 63.2
Atru.BG.163.p Acer truncatum HOM05D005400 ORTHO05D006668 4.3e-28 128.6 105 62.9
Atru.chr1.311 Acer truncatum HOM05D005400 ORTHO05D006668 4.3e-28 128.6 105 62.9
Ciclev10004177m.g Citrus clementina HOM05D005400 ORTHO05D006668 7.4e-28 127.9 106 61.3
Sp6g15090 Schrenkiella parvula HOM05D005400 ORTHO05D006668 7.4e-28 127.9 106 60.4
Cc02_g02120 Coffea canephora HOM05D005400 ORTHO05D006668 9.6e-28 127.5 107 60.7
Gohir.D12G254600 Gossypium hirsutum HOM05D005400 ORTHO05D006668 9.6e-28 127.5 91 67.0
Peaxi162Scf00904g00467 Petunia axillaris HOM05D005400 ORTHO05D006668 9.6e-28 127.5 106 61.3
Hund04816 Selenicereus undatus HOM05D005400 ORTHO05D006668 9.6e-28 127.5 108 59.3
Eucgr.A02677 Eucalyptus grandis HOM05D005400 ORTHO05D006668 1.3e-27 127.1 106 60.4
Hma1.2p1_0142F.1_g064180 Hydrangea macrophylla HOM05D005400 ORTHO05D006668 1.3e-27 127.1 106 61.3
Hma1.2p1_0142F.1_g064190 Hydrangea macrophylla HOM05D005400 ORTHO05D006668 1.3e-27 127.1 106 61.3
Sabra15G0018800 Salix brachista HOM05D005400 ORTHO05D006668 1.3e-27 127.1 107 61.7
Sabra15G0021300 Salix brachista HOM05D005400 ORTHO05D006668 1.3e-27 127.1 107 61.7
Sopen03g003730 Solanum pennellii HOM05D005400 ORTHO05D006668 1.3e-27 127.1 106 61.3
PGSC0003DMG400006589 Solanum tuberosum HOM05D005400 ORTHO05D006668 1.3e-27 127.1 106 61.3
Duzib205G0693 Durio zibethinus HOM05D005400 ORTHO05D006668 1.6e-27 126.7 91 65.9
MD01G1212700 Malus domestica HOM05D005400 ORTHO05D006668 1.6e-27 126.7 105 60.0
Oeu037127.2 Olea europaea HOM05D005400 ORTHO05D006668 1.6e-27 126.7 107 59.8
MSTRG.27059 Avicennia marina HOM05D005400 ORTHO05D006668 2.1e-27 126.3 107 59.8
TWI14G1289 Tripterygium wilfordii HOM05D005400 ORTHO05D006668 2.8e-27 125.9 105 58.1
vmacro06593 Vaccinium macrocarpon HOM05D005400 ORTHO05D006668 2.8e-27 125.9 106 60.4
Gorai.008G272300 Gossypium raimondii HOM05D005400 ORTHO05D006668 3.7e-27 125.6 91 65.9
Solyc03g007800.3 Solanum lycopersicum HOM05D005400 ORTHO05D006668 3.7e-27 125.6 106 60.4
Actinidia34175 Actinidia chinensis HOM05D005400 ORTHO05D006668 4.8e-27 125.2 106 59.4
CDE03G0155 Ceratophyllum demersum HOM05D005400 ORTHO05D006668 4.8e-27 125.2 106 59.4
RcHm_v2.0_Chr1g0379691 Rosa chinensis HOM05D005400 ORTHO05D006668 4.8e-27 125.2 105 60.0
Sc13g0009410 Simmondsia chinensis HOM05D005400 ORTHO05D006668 4.8e-27 125.2 108 59.3
Manes.06G155000 Manihot esculenta HOM05D005400 ORTHO05D006668 6.2e-27 124.8 105 61.0
PSO170G5128 Papaver somniferum HOM05D005400 ORTHO05D006668 6.2e-27 124.8 106 57.5
BcaB08g35655 Brassica carinata HOM05D005400 ORTHO05D006668 8.2e-27 124.4 106 58.5
Lsat_1_v5_gn_5_37621 Lactuca sativa HOM05D005400 ORTHO05D006668 8.2e-27 124.4 105 59.0
Potri.015G024300 Populus trichocarpa HOM05D005400 ORTHO05D006668 8.2e-27 124.4 106 60.4
Thecc.03G189100 Theobroma cacao HOM05D005400 ORTHO05D006668 1.4e-26 123.6 114 54.4
Migut.F00258 Erythranthe guttata HOM05D005400 ORTHO05D006668 1.8e-26 123.2 107 57.9
CARHR265900 Cardamine hirsuta HOM05D005400 ORTHO05D006668 2.4e-26 122.9 106 58.5
Rhsim03G0196700 Rhododendron simsii HOM05D005400 ORTHO05D006668 2.4e-26 122.9 84 70.2
COL.COLO4_30250 Corchorus olitorius HOM05D005400 ORTHO05D006668 3.1e-26 122.5 91 63.7
BcaC04g20520 Brassica carinata HOM05D005400 ORTHO05D006668 6.9e-26 121.3 105 59.0
C09p42650 Brassica napus HOM05D005400 ORTHO05D006668 6.9e-26 121.3 105 59.0
BolC9t57141H Brassica oleracea HOM05D005400 ORTHO05D006668 6.9e-26 121.3 105 59.0
A10p10420 Brassica napus HOM05D005400 ORTHO05D006668 1.2e-25 120.6 106 57.5
HanXRQChr05g0158761 Helianthus annuus HOM05D005400 ORTHO05D006668 1.2e-25 120.6 106 55.7
BraA10t43124Z Brassica rapa HOM05D005400 ORTHO05D006668 2.0e-25 119.8 106 57.5
SGA_v2.0_scaffold44G16767 Striga asiatica HOM05D005400 ORTHO05D006668 2.0e-25 119.8 107 54.2
Aqoxy5G04046 Aquilegia oxysepala HOM05D005400 ORTHO05D006668 3.4e-25 119.0 106 54.7
AUR62031458 Chenopodium quinoa HOM05D005400 ORTHO05D006668 5.8e-25 118.2 107 56.1
Nitab4.5_0002340g0020 Nicotiana tabacum HOM05D005400 ORTHO05D006668 5.8e-25 118.2 98 61.2
THA.LOC104811936 Tarenaya hassleriana HOM05D005400 ORTHO05D006668 7.6e-25 117.9 85 65.9
ECA246G1245 Erigeron canadensis HOM05D005400 ORTHO05D006668 1.0e-24 117.5 105 56.2
AUR62021073 Chenopodium quinoa HOM05D005400 ORTHO05D006668 1.3e-24 117.1 85 67.1
Nitab4.5_0001748g0020 Nicotiana tabacum HOM05D005400 ORTHO05D006668 1.3e-24 117.1 98 62.2
Os05g0210500 Oryza sativa ssp. japonica HOM05D005400 ORTHO05D006668 1.7e-24 116.7 101 55.4
Zm00001eb296310 Zea mays HOM05D005400 ORTHO05D006668 2.9e-24 115.9 87 59.8
HPP92_007648 Vanilla planifolia HOM05D005400 ORTHO05D006668 3.8e-24 115.5 101 52.5
ATR0721G161 Amborella trichopoda HOM05D005400 ORTHO05D006668 1.1e-23 114.0 95 57.9
unitig_46.g18810 Utricularia gibba HOM05D005400 ORTHO05D006668 1.1e-23 114.0 80 66.2
TAR374G0725 Trochodendron aralioides HOM05D005400 ORTHO05D006668 1.4e-23 113.6 106 58.5
FAN03G3290 Fragaria x ananassa HOM05D005400 ORTHO05D006668 2.5e-23 112.8 105 57.1
DCAR_020293 Daucus carota HOM05D005400 ORTHO05D006668 3.2e-23 112.5 107 54.2
EL10Ac3g05372 Beta vulgaris HOM05D005400 ORTHO05D006668 4.2e-23 112.1 85 63.5
FAN06G4050 Fragaria x ananassa HOM05D005400 ORTHO05D006668 5.5e-23 111.7 105 56.2
FAN06G5036 Fragaria x ananassa HOM05D005400 ORTHO05D006668 5.5e-23 111.7 105 56.2
SEGI_11166 Sequoiadendron giganteum HOM05D005400 ORTHO05D006668 5.5e-23 111.7 84 59.5
CDE04G2330 Ceratophyllum demersum HOM05D005400 ORTHO05D006668 9.3e-23 110.9 85 61.2
FAN01G1802 Fragaria x ananassa HOM05D005400 ORTHO05D006668 1.6e-22 110.2 105 55.2
Pp3c8_21590 Physcomitrium patens HOM05D005400 ORTHO05D006668 1.6e-22 110.2 84 59.5
Lj3C915T0 Lonicera japonica HOM05D005400 ORTHO05D006668 7.4e-20 101.3 104 52.9
CBR_g32347 Chara braunii HOM05D000019 ORTHO05D000353 2.0e-17 93.2 102 45.1
Mapoly0089s0007 Marchantia polymorpha HOM05D005400 ORTHO05D006668 7.7e-17 91.3 84 42.9
Ca_10700_v3 Cicer arietinum L. HOM05D005400 ORTHO05D006668 1.7e-16 90.1 107 50.5
arahy.Tifrunner.gnm1.ann1.58WBAP Arachis hypogaea HOM05D005400 ORTHO05D006668 1.4e-15 87.0 114 47.4
AagrBONN_evm.TU.Sc2ySwM_362.1589 Anthoceros agrestis HOM05D005400 ORTHO05D006668 4.2e-15 85.5 84 45.2
FAN10G3192 Fragaria x ananassa HOM05D005400 ORTHO05D006668 2.7e-14 82.8 98 45.9
SMO353G0144 Selaginella moellendorffii HOM05D005400 ORTHO05D006668 2.3e-13 79.7 84 44.0
FAN06G3414 Fragaria x ananassa HOM05D005400 ORTHO05D006668 3.9e-13 79.0 98 45.9
FAN06G1858 Fragaria x ananassa HOM05D005400 ORTHO05D006668 2.5e-12 76.3 94 45.7
CSS0023888 Camellia sinensis var. sinensis HOM05D005400 ORTHO05D006668 3.3e-12 75.9 108 41.7
Haze_00088 Corylus avellana HOM05D005400 ORTHO05D006668 3.3e-12 75.9 106 45.3
SHI13743 Sapria himalayana HOM05D005400 ORTHO05D006668 1.1e-10 70.9 55 60.0
Cre06.g284850 Chlamydomonas reinhardtii HOM05D005400 ORTHO05D006668 1.4e-10 70.5 92 34.8
FAN08G2853 Fragaria x ananassa HOM05D010729 ORTHO05D011897 3.2e-07 59.3 52 57.7
arahy.Tifrunner.gnm1.ann1.P4BN3A Arachis hypogaea HOM05D006110 ORTHO05D007774 1.6e-06 57.0 38 68.4
arahy.Tifrunner.gnm1.ann1.Y0U2QZ Arachis hypogaea HOM05D006110 ORTHO05D007774 1.6e-06 57.0 38 68.4
SMO171G0132 Selaginella moellendorffii HOM05D005400 ORTHO05D006668 3.6e-06 55.8 53 49.1


User provided reference genes

Program Settings