Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.3EIQ25 Arachis hypogaea HOM05D006361 ORTHO05D007824 1.6e-223 779.2 446 100.0
arahy.Tifrunner.gnm1.ann1.L5ZJMR Arachis hypogaea HOM05D006361 ORTHO05D007824 1.5e-160 570.1 390 80.3
arahy.Tifrunner.gnm1.ann1.DP1KMD Arachis hypogaea HOM05D006361 ORTHO05D007824 5.7e-160 568.2 390 79.7
arahy.Tifrunner.gnm1.ann1.D0LIF0 Arachis hypogaea HOM05D006361 ORTHO05D007824 5.2e-153 545.0 390 77.4
Glyma.20G108700 Glycine max HOM05D006361 ORTHO05D007824 1.9e-99 367.1 362 59.7
arahy.Tifrunner.gnm1.ann1.10LCJA Arachis hypogaea HOM05D006361 ORTHO05D007824 6.9e-97 358.6 406 57.1
Lalb_Chr02g0143351 Lupinus albus HOM05D006361 ORTHO05D007824 3.4e-96 356.3 356 58.7
VMungo0720G0403 Vigna mungo HOM05D006361 ORTHO05D007824 1.0e-95 354.8 369 58.5
Lj5g0003295 Lotus japonicus HOM05D006361 ORTHO05D007824 1.7e-95 354.0 360 58.3
Cfa015091 Carpinus fangiana HOM05D006361 ORTHO05D007824 7.2e-86 322.0 385 51.2
TPR.G2489 Trifolium pratense HOM05D006361 ORTHO05D007824 5.7e-83 312.4 362 51.9
Psat6g231640 Pisum sativum HOM05D006361 ORTHO05D007824 9.7e-83 311.6 362 52.2
CiPaw.05G161000 Carya illinoinensis HOM05D006361 ORTHO05D007824 1.3e-82 311.2 388 49.2
Medtr1g112360 Medicago truncatula HOM05D006361 ORTHO05D007824 1.7e-82 310.8 360 53.6
TAR371G0655 Trochodendron aralioides HOM05D006361 ORTHO05D007824 1.5e-80 304.3 360 50.3
GSVIVG01000604001 Vitis vinifera HOM05D006361 ORTHO05D007824 1.5e-80 304.3 373 50.1
Ciclev10005401m.g Citrus clementina HOM05D006361 ORTHO05D007824 2.6e-80 303.5 358 50.3
Cpa.g.sc2.83 Carica papaya HOM05D006361 ORTHO05D007824 5.9e-80 302.4 365 50.7
FAN22G0651 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.1e-78 298.1 356 50.6
CSS0002219 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 1.9e-78 297.4 379 50.7
QL03p040836 Quercus lobata HOM05D006361 ORTHO05D007824 1.9e-78 297.4 370 50.0
ClCG11G000690 Citrullus lanatus HOM05D006361 ORTHO05D007824 2.5e-78 297.0 366 51.1
Potri.010G099500 Populus trichocarpa HOM05D006361 ORTHO05D007824 3.2e-78 296.6 376 47.3
TWI74G1113 Tripterygium wilfordii HOM05D006361 ORTHO05D007824 3.2e-78 296.6 369 49.6
CSS0021447 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 5.5e-78 295.8 371 50.7
Nn4g24771 Nelumbo nucifera HOM05D006361 ORTHO05D007824 5.5e-78 295.8 363 50.4
Prupe.1G340600 Prunus persica HOM05D006361 ORTHO05D007824 7.2e-78 295.4 369 51.5
FvH4_4g35990 Fragaria vesca HOM05D006361 ORTHO05D007824 1.2e-77 294.7 357 51.0
FAN12G2025 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.6e-77 294.3 357 51.0
FAN07G0576 Fragaria x ananassa HOM05D006361 ORTHO05D007824 6.1e-77 292.4 356 50.8
PGR142G2205 Punica granatum HOM05D006361 ORTHO05D007824 7.9e-77 292.0 373 49.1
MD16G1010000 Malus domestica HOM05D006361 ORTHO05D007824 1.0e-76 291.6 373 49.6
Hma1.2p1_0068F.1_g037170 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 1.4e-76 291.2 384 47.4
FAN17G1000 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.8e-76 290.8 360 49.2
Phvul.007G020000 Phaseolus vulgaris HOM05D006361 ORTHO05D007824 6.7e-76 288.9 320 53.4
Rhsim04G0169300 Rhododendron simsii HOM05D006361 ORTHO05D007824 3.3e-75 286.6 356 50.0
Thecc.02G299900 Theobroma cacao HOM05D006361 ORTHO05D007824 3.3e-75 286.6 376 47.1
Lj6A727G89 Lonicera japonica HOM05D006361 ORTHO05D007824 4.4e-75 286.2 367 48.2
MELO3C022554.2 Cucumis melo HOM05D006361 ORTHO05D007824 4.8e-74 282.7 359 48.2
Sed0017139 Sechium edule HOM05D006361 ORTHO05D007824 6.3e-74 282.3 366 48.6
Atru.chr11.1031 Acer truncatum HOM05D006361 ORTHO05D007824 8.2e-74 282.0 360 47.8
Gohir.A03G114200 Gossypium hirsutum HOM05D006361 ORTHO05D007824 1.4e-73 281.2 388 46.4
Sabra10G0072200 Salix brachista HOM05D006361 ORTHO05D007824 1.4e-73 281.2 395 44.6
BraA08t35382Z Brassica rapa HOM05D006361 ORTHO05D007824 1.8e-73 280.8 373 46.1
RcHm_v2.0_Chr4g0445621 Rosa chinensis HOM05D006361 ORTHO05D007824 1.8e-73 280.8 365 49.3
BcaB03g13282 Brassica carinata HOM05D006361 ORTHO05D007824 2.4e-73 280.4 378 46.0
BolC8t48897H Brassica oleracea HOM05D006361 ORTHO05D007824 2.4e-73 280.4 375 46.4
Duzib251G0777 Durio zibethinus HOM05D006361 ORTHO05D007824 4.1e-73 279.6 387 47.3
Peaxi162Scf00705g00017 Petunia axillaris HOM05D006361 ORTHO05D007824 4.1e-73 279.6 368 48.1
Gohir.D02G138700 Gossypium hirsutum HOM05D006361 ORTHO05D007824 9.1e-73 278.5 386 45.9
HanXRQChr08g0224371 Helianthus annuus HOM05D006361 ORTHO05D007824 1.2e-72 278.1 366 46.7
Carub.0001s0863 Capsella rubella HOM05D006361 ORTHO05D007824 3.5e-72 276.6 380 44.2
Gorai.005G155100 Gossypium raimondii HOM05D006361 ORTHO05D007824 3.5e-72 276.6 386 45.6
BcaC07g38489 Brassica carinata HOM05D006361 ORTHO05D007824 4.5e-72 276.2 372 45.7
C08p12590 Brassica napus HOM05D006361 ORTHO05D007824 4.5e-72 276.2 372 45.7
Cc11_g04970 Coffea canephora HOM05D006361 ORTHO05D007824 1.0e-71 275.0 357 49.6
Aqoxy3G04165 Aquilegia oxysepala HOM05D006361 ORTHO05D007824 1.3e-71 274.6 356 46.9
A08p34700 Brassica napus HOM05D006361 ORTHO05D007824 1.7e-71 274.2 372 44.6
CAN.G282.86 Capsicum annuum HOM05D006361 ORTHO05D007824 1.7e-71 274.2 368 46.7
Manes.15G141000 Manihot esculenta HOM05D006361 ORTHO05D007824 1.7e-71 274.2 368 47.8
Oeu005683.1 Olea europaea HOM05D006361 ORTHO05D007824 1.7e-71 274.2 358 48.0
PSO063G1793 Papaver somniferum HOM05D006361 ORTHO05D007824 2.9e-71 273.5 372 44.9
Aa31LG1G5840 Aethionema arabicum HOM05D006361 ORTHO05D007824 5.0e-71 272.7 373 44.8
CARHR009260 Cardamine hirsuta HOM05D006361 ORTHO05D007824 5.0e-71 272.7 374 44.9
Thhalv10008047m.g Eutrema salsugineum HOM05D006361 ORTHO05D007824 6.5e-71 272.3 384 44.5
PGSC0003DMG400030230 Solanum tuberosum HOM05D006361 ORTHO05D007824 6.5e-71 272.3 371 46.6
Sp1g07900 Schrenkiella parvula HOM05D006361 ORTHO05D007824 8.5e-71 271.9 381 45.9
THA.LOC104815221 Tarenaya hassleriana HOM05D006361 ORTHO05D007824 8.5e-71 271.9 391 43.0
Sopen01g014340 Solanum pennellii HOM05D006361 ORTHO05D007824 4.2e-70 269.6 371 46.9
AL1G19780 Arabidopsis lyrata HOM05D006361 ORTHO05D007824 7.2e-70 268.9 378 45.2
AT1G09290 Arabidopsis thaliana HOM05D006361 ORTHO05D007824 1.2e-69 268.1 377 44.6
Eucgr.G02045 Eucalyptus grandis HOM05D006361 ORTHO05D007824 3.6e-69 266.5 385 43.9
Dinv06050 Davidia involucrata HOM05D006361 ORTHO05D007824 5.2e-68 262.7 364 46.7
Sopen01g010510 Solanum pennellii HOM05D006361 ORTHO05D007824 5.2e-68 262.7 373 45.8
Nitab4.5_0003889g0010 Nicotiana tabacum HOM05D006361 ORTHO05D007824 7.4e-67 258.8 376 44.9
Nitab4.5_0000944g0110 Nicotiana tabacum HOM05D006361 ORTHO05D007824 9.7e-67 258.5 379 45.9
Lsat_1_v5_gn_8_33920 Lactuca sativa HOM05D006361 ORTHO05D007824 2.2e-66 257.3 350 46.3
AUR62003478 Chenopodium quinoa HOM05D006361 ORTHO05D007824 2.8e-66 256.9 350 46.9
QL03p040440 Quercus lobata HOM05D006361 ORTHO05D007824 3.7e-66 256.5 472 39.0
Ca_11202_v3 Cicer arietinum L. HOM05D006361 ORTHO05D007824 8.2e-66 255.4 369 45.5
DCAR_030322 Daucus carota HOM05D006361 ORTHO05D007824 1.1e-65 255.0 362 45.9
ECA233G5480 Erigeron canadensis HOM05D006361 ORTHO05D007824 1.0e-63 248.4 357 44.3
EL10Ac6g15395 Beta vulgaris HOM05D006361 ORTHO05D007824 2.2e-63 247.3 362 43.1
AUR62017787 Chenopodium quinoa HOM05D006361 ORTHO05D007824 3.2e-62 243.4 354 45.5
PSO782G3204 Papaver somniferum HOM05D006361 ORTHO05D007824 1.8e-60 237.7 370 41.1
CDE04G0863 Ceratophyllum demersum HOM05D006361 ORTHO05D007824 7.5e-59 232.3 363 40.2
ATR0807G049 Amborella trichopoda HOM05D006361 ORTHO05D007824 1.4e-57 228.0 379 40.6
HPP92_007296 Vanilla planifolia HOM05D006361 ORTHO05D007824 1.4e-57 228.0 363 40.2
Os02g0672400 Oryza sativa ssp. japonica HOM05D006361 ORTHO05D007824 7.7e-56 222.2 357 40.9
Ah.03g147180 Amaranthus hybridus HOM05D006361 ORTHO05D007824 2.1e-53 214.2 374 42.0
SEGI_09761 Sequoiadendron giganteum HOM05D006361 ORTHO05D007824 3.6e-53 213.4 416 37.5
Hma1.2p1_0068F.1_g037190 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 6.8e-52 209.1 299 45.2
COL.COLO4_27543 Corchorus olitorius HOM05D006361 ORTHO05D007824 1.5e-51 208.0 312 44.2
CsaV3_5G012340 Cucumis sativus L. HOM05D006361 ORTHO05D007824 8.3e-50 202.2 223 51.6
vmacro08586 Vaccinium macrocarpon HOM05D006361 ORTHO05D007824 1.4e-44 184.9 452 34.7
Haze_10738 Corylus avellana HOM05D006361 ORTHO05D007824 2.4e-41 174.1 226 47.3
Glyma.10G280900 Glycine max HOM05D006361 ORTHO05D007824 1.2e-35 155.2 217 46.1
Haze_10736 Corylus avellana HOM05D006361 ORTHO05D007824 4.4e-35 153.3 160 56.2
Hund12782 Selenicereus undatus HOM05D006361 ORTHO05D007824 6.4e-34 149.4 135 59.3
Mapoly0161s0009 Marchantia polymorpha HOM05D006361 ORTHO05D007824 8.3e-34 149.1 390 30.8
AagrBONN_evm.TU.Sc2ySwM_228.545 Anthoceros agrestis HOM05D006361 ORTHO05D007824 1.4e-33 148.3 360 32.5
Sc11g0003580 Simmondsia chinensis HOM05D006361 ORTHO05D007824 2.4e-33 147.5 273 40.3
VMungo0251G1708 Vigna mungo HOM05D006361 ORTHO05D007824 8.1e-29 132.5 132 56.1
Actinidia34045 Actinidia chinensis HOM05D006361 ORTHO05D007824 2.7e-24 117.5 123 52.8
Actinidia34046 Actinidia chinensis HOM05D006361 ORTHO05D007824 1.6e-21 108.2 85 67.1
MBI06_g04759_MAGBIO Magnolia biondii HOM05D006361 ORTHO05D007824 4.7e-21 106.7 76 71.1
Oeu038968.1 Olea europaea HOM05D006361 ORTHO05D007824 4.0e-20 103.6 209 34.9
Sabra19G0029800 Salix brachista HOM05D006361 ORTHO05D007824 8.9e-20 102.4 73 68.5
Cc00_g30730 Coffea canephora HOM05D006361 ORTHO05D007824 6.0e-16 89.7 66 66.7
Zm00001eb250300 Zea mays HOM05D006361 ORTHO05D007824 7.8e-16 89.4 98 51.0
CBR_g51236 Chara braunii HOM05D006361 ORTHO05D007824 2.3e-15 87.8 491 25.1
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 5.6e-14 83.2 190 35.3
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 6.2e-13 79.7 70 58.6
Cc00_g15950 Coffea canephora HOM05D006361 ORTHO05D007824 2.9e-10 70.9 69 53.6
Pp3c10_230 Physcomitrium patens HOM05D006361 ORTHO05D007824 3.8e-10 70.5 277 25.3
Hma1.2p1_0068F.1_g037180 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 8.4e-10 69.3 55 60.0
Cc00_g35660 Coffea canephora HOM05D006361 ORTHO05D007824 5.4e-09 66.6 66 56.1


User provided reference genes

Program Settings