Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.3DVS1U Arachis hypogaea HOM05D004462 ORTHO05D005231 1.4e-63 246.1 122 100.0
arahy.Tifrunner.gnm1.ann1.D1IGUM Arachis hypogaea HOM05D004462 ORTHO05D005231 6.8e-63 243.8 122 98.4
Lalb_Chr10g0104001 Lupinus albus HOM05D004462 ORTHO05D005231 4.9e-53 211.1 120 85.0
Sc09g0004600 Simmondsia chinensis HOM05D004462 ORTHO05D005231 1.2e-48 196.4 115 80.0
Ca_17052_v3 Cicer arietinum L. HOM05D004462 ORTHO05D005231 3.6e-48 194.9 118 78.0
Lalb_Chr04g0251561 Lupinus albus HOM05D004462 ORTHO05D005231 4.7e-48 194.5 120 77.5
Peaxi162Scf00344g01910 Petunia axillaris HOM05D004462 ORTHO05D005231 4.7e-48 194.5 117 76.1
TPR.G5341 Trifolium pratense HOM05D004462 ORTHO05D005231 4.7e-48 194.5 120 77.5
Medtr5g076470 Medicago truncatula HOM05D004462 ORTHO05D005231 5.2e-47 191.0 120 76.7
Sabra04G0051800 Salix brachista HOM05D004462 ORTHO05D005231 6.8e-47 190.7 117 73.5
AT1G65820 Arabidopsis thaliana HOM05D004462 ORTHO05D005231 8.9e-47 190.3 120 72.5
A02p13370 Brassica napus HOM05D004462 ORTHO05D005231 8.9e-47 190.3 119 73.1
Nitab4.5_0000483g0160 Nicotiana tabacum HOM05D004462 ORTHO05D005231 8.9e-47 190.3 117 73.5
Psat2g044120 Pisum sativum HOM05D004462 ORTHO05D005231 8.9e-47 190.3 120 76.7
AL2G23110 Arabidopsis lyrata HOM05D004462 ORTHO05D005231 1.2e-46 189.9 120 73.3
Hund06859 Selenicereus undatus HOM05D004462 ORTHO05D005231 1.2e-46 189.9 120 73.3
COL.COLO4_16416 Corchorus olitorius HOM05D004462 ORTHO05D005231 2.0e-46 189.1 117 73.5
Duzib138G0229 Durio zibethinus HOM05D004462 ORTHO05D005231 2.6e-46 188.7 118 75.4
Cpa.g.c42729 Carica papaya HOM05D004462 ORTHO05D005231 3.4e-46 188.3 117 73.5
Solyc02g081430.3 Solanum lycopersicum HOM05D004462 ORTHO05D005231 3.4e-46 188.3 117 72.6
Thhalv10027981m.g Eutrema salsugineum HOM05D004462 ORTHO05D005231 4.4e-46 188.0 119 71.4
LjContig00141g0019021 Lotus japonicus HOM05D004462 ORTHO05D005231 4.4e-46 188.0 119 76.5
THA.LOC104805662 Tarenaya hassleriana HOM05D004462 ORTHO05D005231 4.4e-46 188.0 117 75.2
arahy.Tifrunner.gnm1.ann1.TN4V22 Arachis hypogaea HOM05D004462 ORTHO05D005231 5.8e-46 187.6 120 72.5
Sopen02g026070 Solanum pennellii HOM05D004462 ORTHO05D005231 5.8e-46 187.6 117 72.6
AUR62004745 Chenopodium quinoa HOM05D004462 ORTHO05D005231 7.5e-46 187.2 122 72.1
TWI53G1401 Tripterygium wilfordii HOM05D004462 ORTHO05D005231 7.5e-46 187.2 117 75.2
BcaC03g14720 Brassica carinata HOM05D004462 ORTHO05D005231 9.8e-46 186.8 119 72.3
C02p21630 Brassica napus HOM05D004462 ORTHO05D005231 9.8e-46 186.8 119 72.3
AUR62037507 Chenopodium quinoa HOM05D004462 ORTHO05D005231 9.8e-46 186.8 122 72.1
C04p44160 Brassica napus HOM05D004462 ORTHO05D005231 1.3e-45 186.4 116 75.0
CARHR215890 Cardamine hirsuta HOM05D004462 ORTHO05D005231 1.3e-45 186.4 119 71.4
Ciclev10013005m.g Citrus clementina HOM05D004462 ORTHO05D005231 1.3e-45 186.4 120 73.3
Actinidia32995 Actinidia chinensis HOM05D004462 ORTHO05D005231 1.7e-45 186.0 117 75.2
BcaB04g19159 Brassica carinata HOM05D004462 ORTHO05D005231 1.7e-45 186.0 119 68.1
CAN.G809.94 Capsicum annuum HOM05D004462 ORTHO05D005231 1.7e-45 186.0 117 70.9
BcaB05g24136 Brassica carinata HOM05D004462 ORTHO05D005231 2.2e-45 185.7 119 71.4
A06p23000 Brassica napus HOM05D004462 ORTHO05D005231 2.2e-45 185.7 119 71.4
Duzib128G1697 Durio zibethinus HOM05D004462 ORTHO05D005231 2.2e-45 185.7 118 74.6
Prupe.3G165500 Prunus persica HOM05D004462 ORTHO05D005231 2.2e-45 185.7 120 72.5
PGR044G0250 Punica granatum HOM05D004462 ORTHO05D005231 2.2e-45 185.7 117 72.6
Sp5g20770 Schrenkiella parvula HOM05D004462 ORTHO05D005231 2.9e-45 185.3 119 72.3
BcaC02g09558 Brassica carinata HOM05D004462 ORTHO05D005231 3.7e-45 184.9 116 74.1
A04p10520 Brassica napus HOM05D004462 ORTHO05D005231 3.7e-45 184.9 116 74.1
Eucgr.F02921 Eucalyptus grandis HOM05D004462 ORTHO05D005231 3.7e-45 184.9 115 75.7
Sp7g05300 Schrenkiella parvula HOM05D004462 ORTHO05D005231 3.7e-45 184.9 116 72.4
BraA02t06395Z Brassica rapa HOM05D004462 ORTHO05D005231 6.4e-45 184.1 124 70.2
QL02p063959 Quercus lobata HOM05D004462 ORTHO05D005231 6.4e-45 184.1 115 74.8
CARHR057680 Cardamine hirsuta HOM05D004462 ORTHO05D005231 1.1e-44 183.3 119 70.6
Nn4g24875 Nelumbo nucifera HOM05D004462 ORTHO05D005231 1.1e-44 183.3 122 71.3
PGSC0003DMG400019728 Solanum tuberosum HOM05D004462 ORTHO05D005231 1.4e-44 183.0 117 70.9
Thecc.08G108000 Theobroma cacao HOM05D004462 ORTHO05D005231 1.9e-44 182.6 117 70.9
Carub.0002s1171 Capsella rubella HOM05D004462 ORTHO05D005231 3.2e-44 181.8 119 68.9
Haze_14345 Corylus avellana HOM05D004462 ORTHO05D005231 3.2e-44 181.8 115 73.9
RcHm_v2.0_Chr3g0491741 Rosa chinensis HOM05D004462 ORTHO05D005231 3.2e-44 181.8 121 69.4
Sed0028045 Sechium edule HOM05D004462 ORTHO05D005231 3.2e-44 181.8 117 75.2
CANSAT35G0603 Cannabis sativa HOM05D004462 ORTHO05D005231 4.1e-44 181.4 116 71.6
Cc00_g30600 Coffea canephora HOM05D004462 ORTHO05D005231 4.1e-44 181.4 115 71.3
Cc02_g03200 Coffea canephora HOM05D004462 ORTHO05D005231 4.1e-44 181.4 115 71.3
FvH4_1g30090 Fragaria vesca HOM05D004462 ORTHO05D005231 4.1e-44 181.4 121 69.4
FAN19G2026 Fragaria x ananassa HOM05D004462 ORTHO05D005231 4.1e-44 181.4 121 69.4
Atru.chr1.1966 Acer truncatum HOM05D004462 ORTHO05D005231 5.4e-44 181.0 120 69.2
Cfa007736 Carpinus fangiana HOM05D004462 ORTHO05D005231 5.4e-44 181.0 115 74.8
Oeu002679.1 Olea europaea HOM05D004462 ORTHO05D005231 5.4e-44 181.0 117 71.8
Nn6g35012 Nelumbo nucifera HOM05D004462 ORTHO05D005231 9.2e-44 180.3 119 72.3
Sed0009749 Sechium edule HOM05D004462 ORTHO05D005231 9.2e-44 180.3 117 71.8
EL10Ac4g08901 Beta vulgaris HOM05D004462 ORTHO05D005231 2.1e-43 179.1 114 71.9
Manes.02G082400 Manihot esculenta HOM05D004462 ORTHO05D005231 2.1e-43 179.1 122 69.7
arahy.Tifrunner.gnm1.ann1.U75ZTX Arachis hypogaea HOM05D004462 ORTHO05D005231 2.7e-43 178.7 117 69.2
ClCG03G008870 Citrullus lanatus HOM05D004462 ORTHO05D005231 2.7e-43 178.7 117 73.5
Gohir.A08G037800 Gossypium hirsutum HOM05D004462 ORTHO05D005231 2.7e-43 178.7 117 72.6
RcHm_v2.0_Chr3g0491671 Rosa chinensis HOM05D004462 ORTHO05D005231 2.7e-43 178.7 121 68.6
RcHm_v2.0_Chr3g0491701 Rosa chinensis HOM05D004462 ORTHO05D005231 2.7e-43 178.7 121 68.6
FAN23G0373 Fragaria x ananassa HOM05D004462 ORTHO05D005231 4.6e-43 177.9 121 67.8
FAN28G0360 Fragaria x ananassa HOM05D004462 ORTHO05D005231 4.6e-43 177.9 121 67.8
HanXRQChr14g0443511 Helianthus annuus HOM05D004462 ORTHO05D005231 4.6e-43 177.9 120 65.8
Sabra17G0118400 Salix brachista HOM05D004462 ORTHO05D005231 4.6e-43 177.9 117 70.9
CiPaw.04G050400 Carya illinoinensis HOM05D004462 ORTHO05D005231 6.0e-43 177.6 115 71.3
Potri.017G140900 Populus trichocarpa HOM05D004462 ORTHO05D005231 6.0e-43 177.6 117 68.4
Actinidia28772 Actinidia chinensis HOM05D004462 ORTHO05D005231 7.8e-43 177.2 116 71.6
Gohir.D08G048100 Gossypium hirsutum HOM05D004462 ORTHO05D005231 7.8e-43 177.2 117 71.8
Gorai.004G047600 Gossypium raimondii HOM05D004462 ORTHO05D005231 7.8e-43 177.2 117 71.8
MD09G1269000 Malus domestica HOM05D004462 ORTHO05D005231 7.8e-43 177.2 120 67.5
GSVIVG01001479001 Vitis vinifera HOM05D004462 ORTHO05D005231 7.8e-43 177.2 116 70.7
BolC2t08300H Brassica oleracea HOM05D004462 ORTHO05D005231 1.3e-42 176.4 135 63.7
MELO3C022821.2 Cucumis melo HOM05D004462 ORTHO05D005231 1.7e-42 176.0 117 71.8
CsaV3_5G023890 Cucumis sativus L. HOM05D004462 ORTHO05D005231 3.9e-42 174.9 117 70.9
Hma1.2p1_0085F.1_g043860 Hydrangea macrophylla HOM05D004462 ORTHO05D005231 3.9e-42 174.9 115 71.3
MD17G1267400 Malus domestica HOM05D004462 ORTHO05D005231 3.9e-42 174.9 120 68.3
BraA04t16718Z Brassica rapa HOM05D004462 ORTHO05D005231 5.1e-42 174.5 135 64.4
MSTRG.15620 Avicennia marina HOM05D004462 ORTHO05D005231 6.6e-42 174.1 117 70.1
Nn4g24876 Nelumbo nucifera HOM05D004462 ORTHO05D005231 8.6e-42 173.7 119 70.6
vmacro18489 Vaccinium macrocarpon HOM05D004462 ORTHO05D005231 8.6e-42 173.7 110 73.6
MBI12_g42585_MAGBIO Magnolia biondii HOM05D004462 ORTHO05D005231 1.1e-41 173.3 114 71.9
PSO210G6210 Papaver somniferum HOM05D004462 ORTHO05D005231 1.1e-41 173.3 117 70.1
Rhsim08G0023100 Rhododendron simsii HOM05D004462 ORTHO05D005231 1.1e-41 173.3 114 71.1
Aqoxy3G04063 Aquilegia oxysepala HOM05D004462 ORTHO05D005231 1.5e-41 172.9 117 70.1
PSO063G2986 Papaver somniferum HOM05D004462 ORTHO05D005231 1.5e-41 172.9 116 70.7
vmacro18490 Vaccinium macrocarpon HOM05D004462 ORTHO05D005231 1.9e-41 172.6 117 70.1
vmacro20446 Vaccinium macrocarpon HOM05D004462 ORTHO05D005231 2.5e-41 172.2 139 61.9
PSO782G5040 Papaver somniferum HOM05D004462 ORTHO05D005231 3.3e-41 171.8 116 69.8
HPP92_011089 Vanilla planifolia HOM05D004462 ORTHO05D005231 4.3e-41 171.4 114 65.8
BolC4t25991H Brassica oleracea HOM05D004462 ORTHO05D005231 5.6e-41 171.0 141 61.0
HanXRQChr12g0365631 Helianthus annuus HOM05D004462 ORTHO05D005231 5.6e-41 171.0 120 65.0
Dinv28268 Davidia involucrata HOM05D004462 ORTHO05D005231 9.5e-41 170.2 117 68.4
CiPaw.03G079700 Carya illinoinensis HOM05D004462 ORTHO05D005231 1.2e-40 169.9 115 72.2
Zm00001eb054680 Zea mays HOM05D004462 ORTHO05D005231 2.1e-40 169.1 114 67.5
ATR0753G103 Amborella trichopoda HOM05D004462 ORTHO05D005231 2.8e-40 168.7 113 68.1
HPP92_011106 Vanilla planifolia HOM05D004462 ORTHO05D005231 3.6e-40 168.3 114 64.9
Carub.0007s3236 Capsella rubella HOM05D004462 ORTHO05D005231 6.2e-40 167.5 122 65.6
CDE05G2284 Ceratophyllum demersum HOM05D004462 ORTHO05D005231 1.4e-39 166.4 115 69.6
DCAR_003393 Daucus carota HOM05D004462 ORTHO05D005231 1.8e-39 166.0 116 66.4
ECA238G1611 Erigeron canadensis HOM05D004462 ORTHO05D005231 1.8e-39 166.0 120 62.5
Os03g0709000 Oryza sativa ssp. japonica HOM05D004462 ORTHO05D005231 1.8e-39 166.0 114 67.5
DCAR_014136 Daucus carota HOM05D004462 ORTHO05D005231 2.3e-39 165.6 122 63.9
Lsat_1_v5_gn_2_72161 Lactuca sativa HOM05D004462 ORTHO05D005231 2.3e-39 165.6 118 62.7
Gohir.A07G176700 Gossypium hirsutum HOM05D004462 ORTHO05D005231 3.1e-39 165.2 115 67.0
DCAR_003392 Daucus carota HOM05D004462 ORTHO05D005231 4.0e-39 164.9 116 67.2
Gohir.D07G184000 Gossypium hirsutum HOM05D004462 ORTHO05D005231 4.0e-39 164.9 115 67.0
Gorai.001G204400 Gossypium raimondii HOM05D004462 ORTHO05D005231 4.0e-39 164.9 115 67.0
Aqoxy3G04064 Aquilegia oxysepala HOM05D004462 ORTHO05D005231 5.2e-39 164.5 119 63.9
Aa31LG2G2630 Aethionema arabicum HOM05D000188 ORTHO05D000362 1.2e-38 163.3 150 56.0
Lsat_1_v5_gn_2_72121 Lactuca sativa HOM05D004462 ORTHO05D005231 4.4e-38 161.4 120 58.3
HPP92_016581 Vanilla planifolia HOM05D004462 ORTHO05D005231 4.4e-38 161.4 111 63.1
CDE06G2132 Ceratophyllum demersum HOM05D004462 ORTHO05D005231 1.3e-37 159.8 113 64.6
CSS0041519 Camellia sinensis var. sinensis HOM05D004462 ORTHO05D005231 2.9e-37 158.7 117 64.1
SalBow5G4757 Salvia bowleyana HOM05D004462 ORTHO05D005231 3.7e-37 158.3 115 64.3
DCAR_003394 Daucus carota HOM05D004462 ORTHO05D005231 6.4e-37 157.5 117 64.1
SMO115G0120 Selaginella moellendorffii HOM05D004462 ORTHO05D005231 1.2e-35 153.3 114 63.2
Migut.K01204 Erythranthe guttata HOM05D004462 ORTHO05D005231 3.5e-35 151.8 115 62.6
Mapoly0075s0081 Marchantia polymorpha HOM05D004462 ORTHO05D005231 7.3e-33 144.1 111 59.5
arahy.Tifrunner.gnm1.ann1.UF2MTZ Arachis hypogaea HOM05D004462 ORTHO05D005231 8.9e-31 137.1 120 55.8
MD17G1267600 Malus domestica HOM05D004462 ORTHO05D005231 1.1e-28 130.2 88 63.6
Pp3c13_5830 Physcomitrium patens HOM05D004462 ORTHO05D005231 9.3e-28 127.1 107 57.9
Pp3c13_5831 Physcomitrium patens HOM05D004462 ORTHO05D005231 9.3e-28 127.1 107 57.9
Pp3c12_2960 Physcomitrium patens HOM05D004462 ORTHO05D005231 6.0e-27 124.4 121 52.1
CBR_g21744 Chara braunii HOM05D004462 ORTHO05D005231 1.0e-26 123.6 113 54.0
unitig_748.g8625 Utricularia gibba HOM05D001875 ORTHO05D002019 1.5e-25 119.8 82 70.7
DCAR_007795 Daucus carota HOM05D004462 ORTHO05D005231 2.5e-25 119.0 98 57.1
DCAR_010504 Daucus carota HOM05D004462 ORTHO05D005231 2.5e-25 119.0 98 56.1
Pp3c13_5870 Physcomitrium patens HOM05D004462 ORTHO05D005231 8.1e-24 114.0 119 49.6
FAN26G3346 Fragaria x ananassa HOM05D004462 ORTHO05D005231 1.1e-23 113.6 75 64.0
CBR_g266 Chara braunii HOM05D004462 ORTHO05D005231 6.9e-23 110.9 112 47.3
DCAR_028827 Daucus carota HOM05D000012 ORTHO05D000567 2.6e-22 109.0 82 57.3
HPP92_009441 Vanilla planifolia HOM05D004462 ORTHO05D005231 1.3e-21 106.7 100 50.0
Cre12.g559800 Chlamydomonas reinhardtii HOM05D004462 ORTHO05D005231 1.1e-20 103.6 115 49.6
CBR_g38628 Chara braunii HOM05D004462 ORTHO05D005231 9.3e-20 100.5 119 43.7
AagrBONN_evm.TU.Sc2ySwM_117.1823 Anthoceros agrestis HOM05D004462 ORTHO05D005231 4.6e-19 98.2 113 44.2
Mapoly0056s0049 Marchantia polymorpha HOM05D004462 ORTHO05D005231 7.9e-19 97.4 112 45.5
Pp3c6_29390 Physcomitrium patens HOM05D004462 ORTHO05D005231 7.3e-17 90.9 108 42.6
SMO337G0081 Selaginella moellendorffii HOM05D004462 ORTHO05D005231 6.2e-16 87.8 111 38.7
GSVIVG01020320001 Vitis vinifera HOM05D004462 ORTHO05D005231 4.0e-15 85.1 54 68.5
DCAR_006132 Daucus carota HOM05D004462 ORTHO05D005231 2.6e-14 82.4 58 58.6
DCAR_011767 Daucus carota HOM05D000532 ORTHO05D002414 2.6e-14 82.4 60 56.7
MCO14G359 Micromonas commoda HOM05D004462 ORTHO05D005231 1.7e-13 79.7 112 38.4
MCO08G122 Micromonas commoda HOM05D004462 ORTHO05D005231 2.2e-13 79.3 122 37.7
C04p44040 Brassica napus HOM05D004462 ORTHO05D005231 3.8e-13 78.6 50 78.0
C04p44070 Brassica napus HOM05D004462 ORTHO05D005231 3.8e-13 78.6 50 78.0
C04p44110 Brassica napus HOM05D004462 ORTHO05D005231 3.8e-13 78.6 50 78.0
BcaC02g09555 Brassica carinata HOM05D000188 ORTHO05D005231 1.1e-12 77.0 50 76.0
Lsat_1_v5_gn_5_96540 Lactuca sativa HOM05D004462 ORTHO05D005231 1.9e-12 76.3 87 47.1
AagrBONN_evm.TU.Sc2ySwM_228.473 Anthoceros agrestis HOM05D004462 ORTHO05D005231 1.2e-11 73.6 89 41.6
PRCOL_00004990 Prasinoderma coloniale HOM05D004462 ORTHO05D005231 1.1e-09 67.0 99 38.4
Sabra12G0026800 Salix brachista HOM05D001043 ORTHO05D349056 4.8e-08 61.6 32 84.4
HanXRQChr11g0343111 Helianthus annuus HOM05D004462 ORTHO05D005231 9.0e-07 57.4 41 56.1


User provided reference genes

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