Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.3D346W Arachis hypogaea HOM05D005607 ORTHO05D008142 1.2e-292 1009.2 529 100.0
arahy.Tifrunner.gnm1.ann1.K8QLTQ Arachis hypogaea HOM05D005607 ORTHO05D008142 2.8e-286 988.0 529 98.5
Lj3g0025006 Lotus japonicus HOM05D005607 ORTHO05D008142 3.9e-232 808.1 524 80.9
Lalb_Chr19g0134061 Lupinus albus HOM05D005607 ORTHO05D008142 3.3e-231 805.1 525 81.1
Glyma.06G236100 Glycine max HOM05D005607 ORTHO05D008142 4.5e-228 794.7 526 80.2
Ca_23036_v3 Cicer arietinum L. HOM05D005607 ORTHO05D008142 6.9e-221 770.8 524 77.9
TPR.G28174 Trifolium pratense HOM05D005607 ORTHO05D008142 1.0e-216 756.9 525 77.0
Medtr8g058790 Medicago truncatula HOM05D005607 ORTHO05D008142 1.8e-216 756.1 520 77.1
Medtr8g061280 Medicago truncatula HOM05D005607 ORTHO05D008142 1.8e-216 756.1 520 77.1
VMungo1127G0827 Vigna mungo HOM05D005607 ORTHO05D008142 1.1e-202 710.3 526 72.6
GSVIVG01014288001 Vitis vinifera HOM05D005607 ORTHO05D008142 4.7e-193 678.3 527 68.7
TWI38G0301 Tripterygium wilfordii HOM05D005607 ORTHO05D008142 1.5e-191 673.3 530 66.6
Manes.03G105800 Manihot esculenta HOM05D005607 ORTHO05D008142 4.1e-189 665.2 530 67.2
Ciclev10007885m.g Citrus clementina HOM05D005607 ORTHO05D008142 9.1e-189 664.1 530 65.8
COL.COLO4_36717 Corchorus olitorius HOM05D005607 ORTHO05D008142 9.1e-189 664.1 530 66.2
Dinv20204 Davidia involucrata HOM05D005607 ORTHO05D008142 1.7e-187 659.8 530 66.8
CSS0008326 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 2.9e-187 659.1 530 65.7
MD03G1232700 Malus domestica HOM05D005607 ORTHO05D008142 2.9e-187 659.1 527 66.2
Thecc.07G096400 Theobroma cacao HOM05D005607 ORTHO05D008142 2.5e-186 656.0 530 66.0
Prupe.4G175900 Prunus persica HOM05D005607 ORTHO05D008142 9.4e-186 654.1 527 65.5
RcHm_v2.0_Chr5g0032701 Rosa chinensis HOM05D005607 ORTHO05D008142 2.1e-185 652.9 530 66.6
CiPaw.11G167700 Carya illinoinensis HOM05D005607 ORTHO05D008142 3.6e-185 652.1 530 66.0
MELO3C025610.2 Cucumis melo HOM05D005607 ORTHO05D008142 4.0e-184 648.7 527 65.1
CsaV3_4G033450 Cucumis sativus L. HOM05D005607 ORTHO05D008142 4.0e-184 648.7 527 65.7
Cpa.g.sc131.86 Carica papaya HOM05D005607 ORTHO05D008142 5.2e-184 648.3 530 65.1
Cfa020607 Carpinus fangiana HOM05D005607 ORTHO05D008142 1.5e-183 646.7 530 64.9
Eucgr.F01169 Eucalyptus grandis HOM05D005607 ORTHO05D008142 1.5e-183 646.7 530 64.2
Sabra16G0259600 Salix brachista HOM05D005607 ORTHO05D008142 2.6e-183 646.0 530 66.6
Gohir.A04G035700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 4.4e-183 645.2 530 65.8
Gohir.D05G347700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 4.4e-183 645.2 530 65.7
Potri.001G396500 Populus trichocarpa HOM05D005607 ORTHO05D008142 2.2e-182 642.9 530 65.5
Sed0013999 Sechium edule HOM05D005607 ORTHO05D008142 3.7e-182 642.1 527 64.9
Gorai.009G375500 Gossypium raimondii HOM05D005607 ORTHO05D008142 1.1e-181 640.6 530 65.5
ClCG11G017810 Citrullus lanatus HOM05D005607 ORTHO05D008142 2.4e-181 639.4 541 63.8
FvH4_3g19420 Fragaria vesca HOM05D005607 ORTHO05D008142 7.7e-180 634.4 530 65.1
PGR083G1887 Punica granatum HOM05D005607 ORTHO05D008142 1.8e-176 623.2 532 62.8
Nn1g04204 Nelumbo nucifera HOM05D005607 ORTHO05D008142 2.3e-176 622.9 527 63.6
Duzib213G0871 Durio zibethinus HOM05D005607 ORTHO05D008142 3.4e-175 619.0 524 64.5
Rhsim06G0202700 Rhododendron simsii HOM05D005607 ORTHO05D008142 1.7e-174 616.7 545 60.7
CANSAT35G0745 Cannabis sativa HOM05D005607 ORTHO05D008142 4.9e-174 615.1 527 62.6
Nitab4.5_0008275g0010 Nicotiana tabacum HOM05D005607 ORTHO05D008142 7.0e-173 611.3 530 61.3
MSTRG.12893 Avicennia marina HOM05D005607 ORTHO05D008142 9.2e-173 610.9 530 61.7
FAN16G0865 Fragaria x ananassa HOM05D005607 ORTHO05D008142 1.2e-172 610.5 544 62.3
Cc05_g11730 Coffea canephora HOM05D005607 ORTHO05D008142 5.9e-172 608.2 530 61.5
vmacro11890 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 1.0e-171 607.4 554 59.9
vmacro23190 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 1.3e-171 607.1 554 59.9
Atru.chr2.2407 Acer truncatum HOM05D005607 ORTHO05D008142 3.8e-171 605.5 529 60.5
Nitab4.5_0002330g0110 Nicotiana tabacum HOM05D005607 ORTHO05D008142 5.0e-171 605.1 530 60.9
CSS0003695 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 8.6e-171 604.4 542 61.3
Phvul.011G160300 Phaseolus vulgaris HOM05D005607 ORTHO05D008142 8.6e-171 604.4 451 72.3
Psat7g207160 Pisum sativum HOM05D005607 ORTHO05D008142 1.5e-170 603.6 423 76.1
Sopen07g031060 Solanum pennellii HOM05D005607 ORTHO05D008142 1.9e-170 603.2 530 61.1
CAN.G162.36 Capsicum annuum HOM05D005607 ORTHO05D008142 3.6e-169 599.0 530 59.8
Sc16g0007180 Simmondsia chinensis HOM05D005607 ORTHO05D008142 1.5e-167 593.6 530 59.6
Actinidia31524 Actinidia chinensis HOM05D005607 ORTHO05D008142 2.6e-167 592.8 530 60.2
Oeu005401.4 Olea europaea HOM05D005607 ORTHO05D008142 4.9e-166 588.6 647 52.7
PSO210G5410 Papaver somniferum HOM05D005607 ORTHO05D008142 9.2e-165 584.3 527 59.6
PSO832G0774 Papaver somniferum HOM05D005607 ORTHO05D008142 4.6e-164 582.0 527 59.2
THA.LOC104815562 Tarenaya hassleriana HOM05D005607 ORTHO05D008142 1.0e-163 580.9 530 59.2
MD11G1253400 Malus domestica HOM05D005607 ORTHO05D008142 1.1e-162 577.4 466 66.5
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 7.3e-162 574.7 574 56.4
Eucgr.F01141 Eucalyptus grandis HOM05D005607 ORTHO05D008142 2.1e-161 573.2 529 58.4
ECA236G2999 Erigeron canadensis HOM05D005607 ORTHO05D008142 1.1e-160 570.9 531 57.8
HanXRQChr15g0495421 Helianthus annuus HOM05D005607 ORTHO05D008142 2.3e-160 569.7 531 57.8
DCAR_017123 Daucus carota HOM05D005607 ORTHO05D008142 5.2e-160 568.5 566 56.5
Lsat_1_v5_gn_7_104480 Lactuca sativa HOM05D005607 ORTHO05D008142 1.1e-157 560.8 532 57.7
Carub.0003s1483 Capsella rubella HOM05D005607 ORTHO05D008142 1.9e-157 560.1 524 57.3
AT3G15180 Arabidopsis thaliana HOM05D005607 ORTHO05D008142 9.2e-157 557.8 524 57.3
AL3G27570 Arabidopsis lyrata HOM05D005607 ORTHO05D008142 4.6e-156 555.4 524 57.6
Eucgr.F00890 Eucalyptus grandis HOM05D005607 ORTHO05D008142 3.9e-155 552.4 530 57.2
Sp3g13390 Schrenkiella parvula HOM05D005607 ORTHO05D008142 6.2e-153 545.0 526 56.7
Thhalv10020515m.g Eutrema salsugineum HOM05D005607 ORTHO05D008142 4.4e-151 538.9 524 55.0
ATR0737G117 Amborella trichopoda HOM05D005607 ORTHO05D008142 2.9e-150 536.2 518 55.2
CDE10G0361 Ceratophyllum demersum HOM05D005607 ORTHO05D008142 9.2e-149 531.2 531 55.4
BraA05t22250Z Brassica rapa HOM05D005607 ORTHO05D008142 1.2e-148 530.8 524 54.6
Duzib170G0139 Durio zibethinus HOM05D005607 ORTHO05D008142 6.0e-148 528.5 530 57.2
Ah.06g184600 Amaranthus hybridus HOM05D005607 ORTHO05D008142 1.0e-147 527.7 527 55.4
Aqoxy4G00691 Aquilegia oxysepala HOM05D005607 ORTHO05D008142 3.0e-147 526.2 471 60.5
SGA_v2.0_scaffold130G34350 Striga asiatica HOM05D005607 ORTHO05D008142 5.1e-147 525.4 578 52.2
Aa31LG8G2380 Aethionema arabicum HOM05D005607 ORTHO05D008142 1.1e-146 524.2 535 55.1
BolC5t33890H Brassica oleracea HOM05D005607 ORTHO05D008142 1.1e-144 517.7 538 53.2
C05p52050 Brassica napus HOM05D005607 ORTHO05D008142 1.8e-144 516.9 550 52.4
A05p34290 Brassica napus HOM05D005607 ORTHO05D008142 2.4e-144 516.5 551 51.9
EL10Ac4g08241 Beta vulgaris HOM05D005607 ORTHO05D008142 1.5e-143 513.8 522 55.2
BcaB06g29542 Brassica carinata HOM05D005607 ORTHO05D008142 6.4e-142 508.4 524 54.0
Migut.H01958 Erythranthe guttata HOM05D005607 ORTHO05D008142 1.9e-138 496.9 450 58.2
Os05g0557200 Oryza sativa ssp. japonica HOM05D005607 ORTHO05D008142 3.9e-131 472.6 519 49.7
Zm00001eb295460 Zea mays HOM05D005607 ORTHO05D008142 1.1e-130 471.1 523 48.9
Lj1A839T37 Lonicera japonica HOM05D005607 ORTHO05D008142 1.4e-125 454.1 392 63.3
Hund02235 Selenicereus undatus HOM05D005607 ORTHO05D008142 1.6e-116 424.1 404 59.4
Lj1A839T35 Lonicera japonica HOM05D005607 ORTHO05D008142 1.4e-112 411.0 420 57.1
AUR62019473 Chenopodium quinoa HOM05D005607 ORTHO05D008142 3.0e-107 393.3 557 45.1
AUR62036159 Chenopodium quinoa HOM05D005607 ORTHO05D008142 1.5e-106 391.0 527 46.1
Peaxi162Scf00069g01839 Petunia axillaris HOM05D005607 ORTHO05D008142 1.1e-98 364.8 330 59.1
Solyc07g062860.3 Solanum lycopersicum HOM05D005607 ORTHO05D008142 1.5e-98 364.4 334 59.0
SalBow7G3213 Salvia bowleyana HOM05D005607 ORTHO05D008142 3.7e-89 333.2 293 60.1
SalBow7G3521 Salvia bowleyana HOM05D005607 ORTHO05D008142 3.7e-89 333.2 293 60.1
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 4.1e-88 329.7 390 49.7
AagrBONN_evm.TU.Sc2ySwM_344.1287 Anthoceros agrestis HOM05D005607 ORTHO05D008142 2.3e-83 313.9 518 36.9
QL08p023962 Quercus lobata HOM05D005607 ORTHO05D008142 3.6e-76 290.0 253 62.5
MBI06_g04182_MAGBIO Magnolia biondii HOM05D005607 ORTHO05D008142 4.0e-75 286.6 355 49.9
Pp3c1_12630 Physcomitrium patens HOM05D005607 ORTHO05D008142 7.5e-74 282.3 543 35.7
SMO139G0024 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 1.2e-68 265.0 532 34.0
QL08p023973 Quercus lobata HOM05D005607 ORTHO05D008142 2.7e-68 263.8 196 70.4
FAN11G3919 Fragaria x ananassa HOM05D005607 ORTHO05D008142 4.0e-67 260.0 270 55.2
Glyma.12G162201 Glycine max HOM05D005607 ORTHO05D008142 2.6e-66 257.3 164 81.7
MD11G1279000 Malus domestica HOM05D005607 ORTHO05D008142 8.0e-60 235.7 292 50.3
CARHR090160 Cardamine hirsuta HOM05D005607 ORTHO05D008142 1.5e-53 214.9 229 49.8
Peaxi162Scf00069g01838 Petunia axillaris HOM05D005607 ORTHO05D008142 3.1e-51 207.2 163 63.8
PGSC0003DMG400012404 Solanum tuberosum HOM05D005607 ORTHO05D008142 6.0e-47 193.0 184 54.3
SMO145G0057 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 1.1e-45 188.7 499 29.5
QL08p023949 Quercus lobata HOM05D005607 ORTHO05D008142 1.1e-35 155.6 106 70.8
CBR_g2884 Chara braunii HOM05D005607 ORTHO05D008142 4.0e-35 153.7 293 37.2
FAN25G1444 Fragaria x ananassa HOM05D005607 ORTHO05D008142 6.8e-35 152.9 115 64.3
SEGI_34734 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 3.5e-31 140.6 126 57.9
MELO3C033904.2 Cucumis melo HOM05D005607 ORTHO05D008142 9.0e-19 99.4 95 58.9
EL10Ac6g14983 Beta vulgaris HOM05D005607 ORTHO05D008142 4.9e-17 93.6 101 52.5
SEGI_17376 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 6.4e-17 93.2 135 39.3
MELO3C030698.2 Cucumis melo HOM05D005607 ORTHO05D169846 2.1e-07 61.6 99 45.5
HanXRQChr10g0304121 Helianthus annuus HOM05D005607 ORTHO05D008142 6.0e-07 60.1 64 56.2


User provided reference genes

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