Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.3C43J1 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.7e-55 219.2 115 100.0
arahy.Tifrunner.gnm1.ann1.RJV3W7 Arachis hypogaea HOM05D004487 ORTHO05D005483 2.1e-53 212.2 115 96.5
arahy.Tifrunner.gnm1.ann1.Z7G166 Arachis hypogaea HOM05D004487 ORTHO05D005483 9.6e-51 203.4 114 93.9
arahy.Tifrunner.gnm1.ann1.Y72RXW Arachis hypogaea HOM05D004487 ORTHO05D005483 2.4e-49 198.7 113 93.8
arahy.Tifrunner.gnm1.ann1.0Q3DRY Arachis hypogaea HOM05D004487 ORTHO05D005483 5.8e-48 194.1 114 89.5
arahy.Tifrunner.gnm1.ann1.NRP8RH Arachis hypogaea HOM05D004487 ORTHO05D005483 3.2e-46 188.3 106 90.6
arahy.Tifrunner.gnm1.ann1.10QJ8K Arachis hypogaea HOM05D004487 ORTHO05D005483 9.3e-46 186.8 106 90.6
arahy.Tifrunner.gnm1.ann1.7417N6 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.5e-43 179.5 114 83.3
arahy.Tifrunner.gnm1.ann1.S1NDRU Arachis hypogaea HOM05D004487 ORTHO05D005483 3.3e-43 178.3 114 83.3
arahy.Tifrunner.gnm1.ann1.9RVJ5A Arachis hypogaea HOM05D004487 ORTHO05D005483 6.2e-42 174.1 112 81.2
arahy.Tifrunner.gnm1.ann1.I45DC0 Arachis hypogaea HOM05D004487 ORTHO05D005483 6.4e-39 164.1 111 81.1
arahy.Tifrunner.gnm1.ann1.94164M Arachis hypogaea HOM05D004487 ORTHO05D005483 1.1e-38 163.3 90 97.8
arahy.Tifrunner.gnm1.ann1.FJ4QJG Arachis hypogaea HOM05D004487 ORTHO05D005483 9.3e-38 160.2 90 96.7
arahy.Tifrunner.gnm1.ann1.ZIF87W Arachis hypogaea HOM05D004487 ORTHO05D005483 2.1e-34 149.1 90 83.3
arahy.Tifrunner.gnm1.ann1.32WU9K Arachis hypogaea HOM05D004487 ORTHO05D005483 2.4e-33 145.6 78 93.6
arahy.Tifrunner.gnm1.ann1.PFH739 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.3e-28 129.8 68 91.2
arahy.Tifrunner.gnm1.ann1.PL6VNF Arachis hypogaea HOM05D004487 ORTHO05D005483 1.8e-28 129.4 68 91.2
Lalb_Chr11g0075201 Lupinus albus HOM05D004487 ORTHO05D005483 7.4e-27 124.0 107 64.5
Ca_23004_v3 Cicer arietinum L. HOM05D004487 ORTHO05D005483 4.8e-26 121.3 108 63.9
arahy.Tifrunner.gnm1.ann1.L7ETT7 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.4e-25 119.8 58 96.6
arahy.Tifrunner.gnm1.ann1.4M30AQ Arachis hypogaea HOM05D004487 ORTHO05D005483 7.6e-24 114.0 58 93.1
Lj3g0008934 Lotus japonicus HOM05D004487 ORTHO05D005483 1.0e-23 113.6 106 63.2
arahy.Tifrunner.gnm1.ann1.X4R883 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.3e-23 113.2 58 91.4
Ca_25628_v3 Cicer arietinum L. HOM05D004487 ORTHO05D005483 1.3e-23 113.2 110 60.0
Phvul.009G211400 Phaseolus vulgaris HOM05D004487 ORTHO05D005483 2.7e-21 105.5 112 55.4
Glyma.15G199500 Glycine max HOM05D004487 ORTHO05D005483 6.1e-21 104.4 112 56.2
Gorai.007G062000 Gossypium raimondii HOM05D004487 ORTHO05D005483 1.3e-18 96.7 88 59.1
Psat4g139920 Pisum sativum HOM05D004487 ORTHO05D005483 2.8e-18 95.5 113 47.8
QL06p033465 Quercus lobata HOM05D004487 ORTHO05D005483 3.7e-18 95.1 92 54.3
TPR.G36682 Trifolium pratense HOM05D005330 ORTHO05D006489 4.8e-18 94.7 113 50.4
AUR62000713 Chenopodium quinoa HOM05D004487 ORTHO05D005483 8.2e-18 94.0 89 53.9
Psat4g139880 Pisum sativum HOM05D004487 ORTHO05D005483 1.8e-17 92.8 109 48.6
CiPaw.04G093900 Carya illinoinensis HOM05D004487 ORTHO05D005483 2.4e-17 92.4 104 49.0
AUR62005250 Chenopodium quinoa HOM05D004487 ORTHO05D005483 3.1e-17 92.0 89 51.7
Ah.04g161200 Amaranthus hybridus HOM05D004487 ORTHO05D005483 5.3e-17 91.3 105 41.9
Gohir.A11G053300 Gossypium hirsutum HOM05D004487 ORTHO05D005483 5.3e-17 91.3 91 53.8
Ciclev10026392m.g Citrus clementina HOM05D004487 ORTHO05D005483 1.2e-16 90.1 110 44.5
Manes.12G140400 Manihot esculenta HOM05D004487 ORTHO05D005483 1.5e-16 89.7 100 51.0
Gohir.D11G056800 Gossypium hirsutum HOM05D004487 ORTHO05D005483 2.0e-16 89.4 117 47.9
TAR625G1215 Trochodendron aralioides HOM05D004487 ORTHO05D005483 2.0e-16 89.4 106 46.2
Glyma.09G092600 Glycine max HOM05D004487 ORTHO05D005483 2.6e-16 89.0 113 51.3
Thecc.01G110300 Theobroma cacao HOM05D004487 ORTHO05D005483 2.6e-16 89.0 101 47.5
Nn8g40276 Nelumbo nucifera HOM05D004487 ORTHO05D005483 4.5e-16 88.2 88 51.1
VMungo1309G0247 Vigna mungo HOM05D004487 ORTHO05D005483 4.5e-16 88.2 112 48.2
Aa31LG6G15640 Aethionema arabicum HOM05D004487 ORTHO05D005483 5.9e-16 87.8 100 49.0
TPR.G33715 Trifolium pratense HOM05D004487 ORTHO05D005483 5.9e-16 87.8 111 45.0
EL10Ac4g09863 Beta vulgaris HOM05D004487 ORTHO05D005483 7.7e-16 87.4 110 44.5
arahy.Tifrunner.gnm1.ann1.02EUR6 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.0e-15 87.0 58 75.9
CANSAT01G2370 Cannabis sativa HOM05D004487 ORTHO05D005483 1.3e-15 86.7 109 45.9
Lalb_Chr12g0203581 Lupinus albus HOM05D004487 ORTHO05D005483 2.2e-15 85.9 113 48.7
Duzib147G1438 Durio zibethinus HOM05D004487 ORTHO05D005483 5.0e-15 84.7 91 50.5
MD01G1016500 Malus domestica HOM05D004487 ORTHO05D005483 5.0e-15 84.7 106 48.1
Oeu040918.3 Olea europaea HOM05D004487 ORTHO05D005483 5.0e-15 84.7 111 45.9
Potri.005G082500 Populus trichocarpa HOM05D004487 ORTHO05D005483 6.5e-15 84.3 118 46.6
PGR004G1100 Punica granatum HOM05D004487 ORTHO05D005483 6.5e-15 84.3 106 44.3
Cc02_g15410 Coffea canephora HOM05D004487 ORTHO05D005483 1.4e-14 83.2 88 51.1
Atru.chr3.204 Acer truncatum HOM05D004487 ORTHO05D005483 2.5e-14 82.4 113 46.0
MELO3C012399.2 Cucumis melo HOM05D004487 ORTHO05D005483 2.5e-14 82.4 88 50.0
ClCG05G021300 Citrullus lanatus HOM05D004487 ORTHO05D005483 3.2e-14 82.0 88 48.9
COL.COLO4_11036 Corchorus olitorius HOM05D004487 ORTHO05D005483 3.2e-14 82.0 111 43.2
Haze_05964 Corylus avellana HOM05D004487 ORTHO05D005483 3.2e-14 82.0 103 43.7
Migut.H01422 Erythranthe guttata HOM05D004487 ORTHO05D005483 3.2e-14 82.0 87 52.9
MSTRG.14740 Avicennia marina HOM05D004487 ORTHO05D005483 4.2e-14 81.6 88 51.1
ClCG01G019130 Citrullus lanatus HOM05D004487 ORTHO05D005483 4.2e-14 81.6 88 48.9
MBI04_g31212_MAGBIO Magnolia biondii HOM05D004487 ORTHO05D005483 4.2e-14 81.6 69 58.0
MD15G1334800 Malus domestica HOM05D004487 ORTHO05D005483 4.2e-14 81.6 106 47.2
Nitab4.5_0000477g0120 Nicotiana tabacum HOM05D004487 ORTHO05D005483 4.2e-14 81.6 87 51.7
Potri.007G085100 Populus trichocarpa HOM05D004487 ORTHO05D005483 4.2e-14 81.6 114 47.4
Sabra07G0070400 Salix brachista HOM05D004487 ORTHO05D005483 4.2e-14 81.6 114 46.5
vmacro21317 Vaccinium macrocarpon HOM05D004487 ORTHO05D005483 4.2e-14 81.6 108 44.4
MELO3C007790.2 Cucumis melo HOM05D004487 ORTHO05D005483 5.5e-14 81.3 88 48.9
CsaV3_6G045820 Cucumis sativus L. HOM05D004487 ORTHO05D005483 5.5e-14 81.3 88 48.9
Prupe.6G176600 Prunus persica HOM05D004487 ORTHO05D005483 5.5e-14 81.3 105 46.7
Dinv13358 Davidia involucrata HOM05D004487 ORTHO05D005483 7.2e-14 80.9 103 42.7
TWI74G0090 Tripterygium wilfordii HOM05D004487 ORTHO05D005483 9.4e-14 80.5 101 44.6
CSS0025780 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 1.6e-13 79.7 116 41.4
CAN.G861.28 Capsicum annuum HOM05D004487 ORTHO05D005483 1.6e-13 79.7 113 41.6
CsaV3_5G036000 Cucumis sativus L. HOM05D004487 ORTHO05D005483 1.6e-13 79.7 88 48.9
Lj2A942G27 Lonicera japonica HOM05D004487 ORTHO05D005483 1.6e-13 79.7 88 52.3
PGSC0003DMG400015213 Solanum tuberosum HOM05D004487 ORTHO05D005483 2.1e-13 79.3 113 44.2
Nn2g14563 Nelumbo nucifera HOM05D004487 ORTHO05D005483 2.7e-13 79.0 115 43.5
Peaxi162Scf00171g00006 Petunia axillaris HOM05D004487 ORTHO05D005483 6.1e-13 77.8 112 41.1
Nitab4.5_0007717g0020 Nicotiana tabacum HOM05D004487 ORTHO05D005483 7.9e-13 77.4 112 41.1
Eucgr.I00528 Eucalyptus grandis HOM05D004487 ORTHO05D005483 1.0e-12 77.0 73 49.3
Psat2g176760 Pisum sativum HOM05D004487 ORTHO05D005483 1.4e-12 76.6 88 47.7
Sed0026038 Sechium edule HOM05D004487 ORTHO05D005483 1.4e-12 76.6 104 45.2
TAR626G1474 Trochodendron aralioides HOM05D004487 ORTHO05D005483 1.4e-12 76.6 87 49.4
Nitab4.5_0001495g0020 Nicotiana tabacum HOM05D004487 ORTHO05D005483 3.0e-12 75.5 112 41.1
Sp7g04740 Schrenkiella parvula HOM05D004487 ORTHO05D005483 3.0e-12 75.5 84 45.2
GSVIVG01022203001 Vitis vinifera HOM05D004487 ORTHO05D005483 3.0e-12 75.5 100 41.0
Solyc03g019910.3 Solanum lycopersicum HOM05D004487 ORTHO05D005483 3.9e-12 75.1 113 43.4
Sopen03g029710 Solanum pennellii HOM05D004487 ORTHO05D005483 3.9e-12 75.1 113 42.5
vmacro18624 Vaccinium macrocarpon HOM05D004487 ORTHO05D005483 5.1e-12 74.7 108 39.8
RcHm_v2.0_Chr2g0115971 Rosa chinensis HOM05D004487 ORTHO05D005483 6.7e-12 74.3 105 40.0
Prupe.8G078400 Prunus persica HOM05D004487 ORTHO05D005483 8.8e-12 73.9 107 43.0
Lsat_1_v5_gn_2_120680 Lactuca sativa HOM05D004487 ORTHO05D005483 1.1e-11 73.6 99 42.4
ECA238G1615 Erigeron canadensis HOM05D004487 ORTHO05D005483 1.5e-11 73.2 83 49.4
Thhalv10027902m.g Eutrema salsugineum HOM05D004487 ORTHO05D005483 1.5e-11 73.2 86 46.5
Sc16g0008840 Simmondsia chinensis HOM05D004487 ORTHO05D005483 1.5e-11 73.2 109 37.6
FvH4_1g25670 Fragaria vesca HOM05D004487 ORTHO05D005483 2.0e-11 72.8 105 42.9
Carub.0007s0150 Capsella rubella HOM05D004487 ORTHO05D005483 2.5e-11 72.4 111 39.6
FAN28G1272 Fragaria x ananassa HOM05D004487 ORTHO05D005483 4.3e-11 71.6 113 38.9
FAN28G1914 Fragaria x ananassa HOM05D004487 ORTHO05D005483 4.3e-11 71.6 113 38.9
HanXRQChr14g0458831 Helianthus annuus HOM05D004487 ORTHO05D005483 4.3e-11 71.6 84 48.8
Nitab4.5_0007222g0010 Nicotiana tabacum HOM05D004487 ORTHO05D005483 5.7e-11 71.2 73 50.7
Rhsim05G0180000 Rhododendron simsii HOM05D004487 ORTHO05D005483 5.7e-11 71.2 90 42.2
FvH4_1g21950 Fragaria vesca HOM05D004487 ORTHO05D005483 9.7e-11 70.5 111 40.5
FAN19G3081 Fragaria x ananassa HOM05D004487 ORTHO05D005483 9.7e-11 70.5 105 41.9
Dinv05687 Davidia involucrata HOM05D004487 ORTHO05D005483 1.3e-10 70.1 88 44.3
FAN19G1427 Fragaria x ananassa HOM05D004487 ORTHO05D005483 2.8e-10 68.9 111 39.6
FAN23G0375 Fragaria x ananassa HOM05D004487 ORTHO05D005483 2.8e-10 68.9 111 39.6
CDE04G3174 Ceratophyllum demersum HOM05D004487 ORTHO05D005483 3.7e-10 68.6 116 37.9
CDE06G2627 Ceratophyllum demersum HOM05D004487 ORTHO05D005483 3.7e-10 68.6 71 47.9
FAN26G0673 Fragaria x ananassa HOM05D004487 ORTHO05D005483 6.3e-10 67.8 105 41.0
Gohir.1Z049552 Gossypium hirsutum HOM05D004487 ORTHO05D005483 6.3e-10 67.8 69 50.7
DCAR_014253 Daucus carota HOM05D004487 ORTHO05D005483 8.2e-10 67.4 105 39.0
FAN26G2580 Fragaria x ananassa HOM05D004487 ORTHO05D005483 8.2e-10 67.4 111 38.7
BcaC02g09572 Brassica carinata HOM05D004487 ORTHO05D005483 1.4e-09 66.6 85 42.4
BolC4t26003H Brassica oleracea HOM05D004487 ORTHO05D005483 1.4e-09 66.6 85 42.4
SGA_v2.0_scaffold106G30591 Striga asiatica HOM05D004487 ORTHO05D005483 1.4e-09 66.6 88 46.6
Lj2A929T16 Lonicera japonica HOM05D004487 ORTHO05D005483 1.8e-09 66.2 88 45.5
C04p44290 Brassica napus HOM05D004487 ORTHO05D005483 3.1e-09 65.5 85 41.2
BcaB06g27071 Brassica carinata HOM05D004487 ORTHO05D005483 4.1e-09 65.1 70 44.3
A04p10610 Brassica napus HOM05D004487 ORTHO05D005483 5.3e-09 64.7 85 41.2
BraA04t16724Z Brassica rapa HOM05D004487 ORTHO05D005483 5.3e-09 64.7 85 41.2
unitig_22.g6757 Utricularia gibba HOM05D004487 ORTHO05D005483 5.3e-09 64.7 110 37.3
THA.LOC104807718 Tarenaya hassleriana HOM05D004487 ORTHO05D005483 5.9e-08 61.2 91 41.8
AL7G11780 Arabidopsis lyrata HOM05D004487 ORTHO05D005483 7.7e-08 60.8 95 38.9
Aqoxy2G03854 Aquilegia oxysepala HOM05D004487 ORTHO05D005483 1.0e-07 60.5 83 44.6
BcaNung00884 Brassica carinata HOM05D004487 ORTHO05D032747 3.8e-07 58.5 73 45.2
CARHR215520 Cardamine hirsuta HOM05D004487 ORTHO05D005483 5.0e-07 58.2 69 40.6
Actinidia08329 Actinidia chinensis HOM05D004487 ORTHO05D005483 6.5e-07 57.8 58 44.8
SEGI_02201 Sequoiadendron giganteum HOM05D004487 ORTHO05D005483 6.5e-07 57.8 90 42.2
Lj4A903G12 Lonicera japonica HOM05D004487 ORTHO05D005483 2.5e-06 55.8 55 52.7
Sp7g36260 Schrenkiella parvula HOM05D004487 ORTHO05D005483 3.2e-06 55.5 66 42.4
AT4G39630 Arabidopsis thaliana HOM05D004487 ORTHO05D005483 7.2e-06 54.3 85 34.1


User provided reference genes

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