Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.3C01L3 Arachis hypogaea HOM05D007699 ORTHO05D009796 4.7e-38 160.6 76 100.0
arahy.Tifrunner.gnm1.ann1.C3EWW9 Arachis hypogaea HOM05D007699 ORTHO05D009796 1.5e-15 85.9 84 58.3
Medtr3g105890 Medicago truncatula HOM05D007699 ORTHO05D009796 1.5e-15 85.9 74 60.8
Mapoly0086s0020 Marchantia polymorpha HOM05D007699 ORTHO05D009796 4.3e-15 84.3 40 95.0
C03p91420 Brassica napus HOM05D007699 ORTHO05D009796 1.2e-14 82.8 39 94.9
FvH4_3g13700 Fragaria vesca HOM05D007699 ORTHO05D009796 1.2e-14 82.8 37 100.0
A05p18230 Brassica napus HOM05D007699 ORTHO05D009796 1.6e-14 82.4 39 94.9
FAN18G1300 Fragaria x ananassa HOM05D005738 ORTHO05D007135 2.1e-14 82.0 52 75.0
FAN18G3749 Fragaria x ananassa HOM05D005738 ORTHO05D007135 2.1e-14 82.0 52 75.0
Prupe.7G080000 Prunus persica HOM05D007699 ORTHO05D009796 2.1e-14 82.0 38 97.4
Manes.11G145650 Manihot esculenta HOM05D007699 ORTHO05D009796 2.8e-14 81.6 45 82.2
Potri.011G103301 Populus trichocarpa HOM05D007699 ORTHO05D009796 2.8e-14 81.6 41 90.2
CARHR185520 Cardamine hirsuta HOM05D007699 ORTHO05D009796 3.6e-14 81.3 42 88.1
FAN08G2016 Fragaria x ananassa HOM05D007699 ORTHO05D009796 3.6e-14 81.3 36 100.0
FAN13G3199 Fragaria x ananassa HOM05D007699 ORTHO05D009796 3.6e-14 81.3 36 100.0
arahy.Tifrunner.gnm1.ann1.3J1SD9 Arachis hypogaea HOM05D007699 ORTHO05D009796 4.7e-14 80.9 41 90.2
Phvul.008G062500 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 4.7e-14 80.9 39 92.3
FAN11G1327 Fragaria x ananassa HOM05D007699 ORTHO05D009796 6.2e-14 80.5 36 100.0
Medtr3g084270 Medicago truncatula HOM05D007699 ORTHO05D009796 6.2e-14 80.5 36 100.0
Phvul.001G084100 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 6.2e-14 80.5 36 100.0
Potri.011G103401 Populus trichocarpa HOM05D007699 ORTHO05D009796 6.2e-14 80.5 36 100.0
QL03p053410 Quercus lobata HOM05D007699 ORTHO05D009796 6.2e-14 80.5 36 100.0
TPR.G38695 Trifolium pratense HOM05D000020 ORTHO05D000543 6.2e-14 80.5 36 100.0
Carub.0003s1340 Capsella rubella HOM05D007699 ORTHO05D009796 1.1e-13 79.7 41 87.8
TPR.G12299 Trifolium pratense HOM05D007699 ORTHO05D009796 1.1e-13 79.7 36 97.2
CARHR088640 Cardamine hirsuta HOM05D007699 ORTHO05D009796 1.8e-13 79.0 35 100.0
Migut.J00839 Erythranthe guttata HOM05D007699 ORTHO05D009796 1.8e-13 79.0 35 100.0
FAN11G3494 Fragaria x ananassa HOM05D007699 ORTHO05D009796 1.8e-13 79.0 35 100.0
Hma1.2p1_0886F.1_g232660 Hydrangea macrophylla HOM05D007699 ORTHO05D009796 1.8e-13 79.0 35 100.0
Hma1.2p1_0886F.1_g232685 Hydrangea macrophylla HOM05D007699 ORTHO05D009796 1.8e-13 79.0 35 100.0
Mapoly0020s0143 Marchantia polymorpha HOM05D007699 ORTHO05D009796 1.8e-13 79.0 36 97.2
Nitab4.5_0005352g0040 Nicotiana tabacum HOM05D007699 ORTHO05D009796 1.8e-13 79.0 35 100.0
Phvul.001G066900 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 1.8e-13 79.0 35 100.0
Prupe.7G069600 Prunus persica HOM05D007699 ORTHO05D009796 1.8e-13 79.0 35 100.0
Sopen12g028800 Solanum pennellii HOM05D007699 ORTHO05D009796 1.8e-13 79.0 35 100.0
FAN08G0324 Fragaria x ananassa HOM05D007699 ORTHO05D009796 3.1e-13 78.2 38 94.7
Phvul.001G066700 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 3.1e-13 78.2 36 97.2
Solyc12g056290.2 Solanum lycopersicum HOM05D007699 ORTHO05D009796 3.1e-13 78.2 37 94.6
Gohir.D06G068332 Gossypium hirsutum HOM05D007699 ORTHO05D009796 5.2e-13 77.4 36 94.4
EL10Ac6g13685 Beta vulgaris HOM05D007699 ORTHO05D009796 8.9e-13 76.6 59 66.1
EL10Ac6g13349 Beta vulgaris HOM05D007699 ORTHO05D009796 1.5e-12 75.9 37 91.9
EL10Ac6g13624 Beta vulgaris HOM05D007699 ORTHO05D009796 1.5e-12 75.9 37 91.9
EL10Ac6g13683 Beta vulgaris HOM05D007699 ORTHO05D009796 1.5e-12 75.9 37 91.9
GSVIVG01037330001 Vitis vinifera HOM05D007699 ORTHO05D009796 4.4e-12 74.3 36 94.4
Pp3c15_10810 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.8e-12 73.9 38 89.5
Pp3c15_10813 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.8e-12 73.9 38 89.5
Pp3c15_10820 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.8e-12 73.9 38 89.5
Thecc.10G037500 Theobroma cacao HOM05D007699 ORTHO05D009796 7.6e-12 73.6 48 72.9
Ah.10g036850 Amaranthus hybridus HOM05D007699 ORTHO05D009796 9.9e-12 73.2 36 91.7
EL10Ac6g13623 Beta vulgaris HOM05D007699 ORTHO05D009796 1.3e-11 72.8 32 100.0
Ciclev10018283m.g Citrus clementina HOM05D007699 ORTHO05D009796 1.3e-11 72.8 35 94.3
Nn7g36904 Nelumbo nucifera HOM05D007699 ORTHO05D009796 1.3e-11 72.8 32 100.0
Pp3c1_6540 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.3e-11 72.8 35 94.3
TPR.G32688 Trifolium pratense HOM05D007699 ORTHO05D009796 1.3e-11 72.8 32 100.0
Pp3c10_15080 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.7e-11 72.4 37 89.2
Pp3c10_15084 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.7e-11 72.4 37 89.2
Pp3s1006_30 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.7e-11 72.4 37 89.2
Pp3s638_22 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.7e-11 72.4 37 89.2
Pp3s677_10 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.7e-11 72.4 37 89.2
Pp3s677_11 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.7e-11 72.4 37 89.2
EL10Ac6g13684 Beta vulgaris HOM05D007699 ORTHO05D009796 2.2e-11 72.0 36 91.7
Gorai.010G079800 Gossypium raimondii HOM05D007699 ORTHO05D009796 3.8e-11 71.2 34 94.1
Medtr8g461450 Medicago truncatula HOM05D007699 ORTHO05D009796 6.4e-11 70.5 32 100.0
Pp3s677_20 Physcomitrium patens HOM05D007699 ORTHO05D009796 6.4e-11 70.5 35 91.4
Phvul.001G090500 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 8.4e-11 70.1 36 88.9
Gorai.011G262200 Gossypium raimondii HOM05D007699 ORTHO05D009796 1.1e-10 69.7 32 96.9
Potri.005G055534 Populus trichocarpa HOM05D007699 ORTHO05D009796 1.1e-10 69.7 32 96.9
Potri.005G055667 Populus trichocarpa HOM05D007699 ORTHO05D009796 1.4e-10 69.3 32 96.9
Medtr3g108610 Medicago truncatula HOM05D007699 ORTHO05D009796 2.4e-10 68.6 35 91.4
Pp3c24_6960 Physcomitrium patens HOM05D007699 ORTHO05D009796 2.4e-10 68.6 35 88.6
Pp3c24_6961 Physcomitrium patens HOM05D007699 ORTHO05D009796 2.4e-10 68.6 35 88.6
CSS0021910 Camellia sinensis var. sinensis HOM05D007699 ORTHO05D009796 3.2e-10 68.2 40 80.0
FAN18G1871 Fragaria x ananassa HOM05D007699 ORTHO05D009796 3.2e-10 68.2 34 91.2
Glyma.19G099100 Glycine max HOM05D007699 ORTHO05D009796 3.2e-10 68.2 34 91.2
Phvul.009G076400 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 4.1e-10 67.8 34 88.2
SHI29091 Sapria himalayana HOM05D007699 ORTHO05D009796 4.1e-10 67.8 33 93.9
CSS0023756 Camellia sinensis var. sinensis HOM05D007699 ORTHO05D009796 5.4e-10 67.4 35 88.6
Carub.0006s3371 Capsella rubella HOM05D007699 ORTHO05D009796 5.4e-10 67.4 31 96.8
Gohir.A11G277350 Gossypium hirsutum HOM05D007699 ORTHO05D009796 5.4e-10 67.4 31 96.8
Pp3c1_26810 Physcomitrium patens HOM05D007699 ORTHO05D009796 7.1e-10 67.0 37 86.5
Pp3c1_26830 Physcomitrium patens HOM05D007699 ORTHO05D009796 7.1e-10 67.0 37 86.5
Pp3c21_2000 Physcomitrium patens HOM05D007699 ORTHO05D009796 7.1e-10 67.0 35 85.7
Pp3c21_2022 Physcomitrium patens HOM05D007699 ORTHO05D009796 7.1e-10 67.0 35 85.7
FAN11G3758 Fragaria x ananassa HOM05D007699 ORTHO05D009796 9.2e-10 66.6 30 100.0
Gorai.011G262800 Gossypium raimondii HOM05D007699 ORTHO05D009796 9.2e-10 66.6 30 100.0
PGSC0003DMG400029597 Solanum tuberosum HOM05D000312 ORTHO05D000221 9.2e-10 66.6 30 100.0
EL10Ac6g13625 Beta vulgaris HOM05D007699 ORTHO05D009796 3.5e-09 64.7 34 88.2
EL10Ac6g13621 Beta vulgaris HOM05D007699 ORTHO05D009796 5.1e-08 60.8 35 80.0
Medtr2g101670 Medicago truncatula HOM05D007699 ORTHO05D009796 8.7e-08 60.1 33 81.8
Pp3c24_16090 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.1e-07 59.7 36 72.2
Pp3c24_16091 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.1e-07 59.7 36 72.2
SHI28974 Sapria himalayana HOM05D007699 ORTHO05D009796 1.9e-07 58.9 37 75.7
Medtr6g070990 Medicago truncatula HOM05D007699 ORTHO05D009796 5.6e-07 57.4 26 100.0
Pp3c27_1930 Physcomitrium patens HOM05D007699 ORTHO05D009796 6.2e-06 53.9 32 75.0


User provided reference genes

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