Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.391TM2 Arachis hypogaea HOM05D004157 ORTHO05D004860 1.0e-143 513.5 265 100.0
arahy.Tifrunner.gnm1.ann1.66CLCN Arachis hypogaea HOM05D004157 ORTHO05D004860 8.4e-143 510.4 265 99.2
TPR.G38481 Trifolium pratense HOM05D004157 ORTHO05D004860 4.7e-117 424.9 262 83.2
Phvul.009G000600 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 1.4e-116 423.3 259 84.2
Glyma.06G005600 Glycine max HOM05D004157 ORTHO05D004860 3.0e-116 422.2 262 81.7
Lj1g0011325 Lotus japonicus HOM05D004157 ORTHO05D004860 5.2e-116 421.4 248 85.1
Glyma.04G005900 Glycine max HOM05D004157 ORTHO05D004860 1.5e-115 419.9 263 81.7
Psat5g003520 Pisum sativum HOM05D004157 ORTHO05D004860 1.5e-115 419.9 252 84.1
VMungo1309G1201 Vigna mungo HOM05D004157 ORTHO05D004860 5.7e-115 417.9 250 83.2
Lalb_Chr11g0061251 Lupinus albus HOM05D004157 ORTHO05D004860 2.8e-114 415.6 248 82.7
Medtr3g117700 Medicago truncatula HOM05D004157 ORTHO05D004860 1.3e-111 406.8 258 79.8
Ca_15317_v3 Cicer arietinum L. HOM05D000600 ORTHO05D004860 1.2e-109 400.2 237 84.8
QL11p047455 Quercus lobata HOM05D004157 ORTHO05D004860 1.7e-106 389.8 258 77.9
Glyma.06G005700 Glycine max HOM05D004157 ORTHO05D004860 5.3e-105 384.8 255 75.7
PGR142G1140 Punica granatum HOM05D004157 ORTHO05D004860 7.7e-104 380.9 259 72.6
PGR042G1356 Punica granatum HOM05D004157 ORTHO05D004860 2.2e-103 379.4 259 74.5
CANSAT25G0852 Cannabis sativa HOM05D004157 ORTHO05D004860 2.9e-103 379.0 259 73.0
TWI79G0156 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 2.9e-103 379.0 268 73.9
VMungo1309G1253 Vigna mungo HOM05D004157 ORTHO05D004860 2.9e-103 379.0 255 76.9
Potri.004G167200 Populus trichocarpa HOM05D004157 ORTHO05D004860 3.8e-103 378.6 259 74.5
Cfa005173 Carpinus fangiana HOM05D004157 ORTHO05D004860 5.0e-103 378.3 262 72.9
Actinidia32087 Actinidia chinensis HOM05D004157 ORTHO05D004860 6.5e-103 377.9 253 76.7
Sabra09G0098500 Salix brachista HOM05D004157 ORTHO05D004860 8.5e-103 377.5 266 73.3
Cc02_g16620 Coffea canephora HOM05D004157 ORTHO05D004860 1.1e-102 377.1 257 72.8
CiPaw.06G125600 Carya illinoinensis HOM05D000447 ORTHO05D000315 1.5e-102 376.7 242 77.3
vmacro22690 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 1.9e-102 376.3 252 75.8
TWI75G1232 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 2.5e-102 375.9 252 75.4
TAR381G0601 Trochodendron aralioides HOM05D004157 ORTHO05D004860 4.2e-102 375.2 269 71.4
Atru.chr5.3210 Acer truncatum HOM05D004157 ORTHO05D004860 5.5e-102 374.8 251 76.9
Thecc.02G068100 Theobroma cacao HOM05D004157 ORTHO05D004860 5.5e-102 374.8 252 75.0
Eucgr.G01748 Eucalyptus grandis HOM05D004157 ORTHO05D004860 9.4e-102 374.0 259 72.2
Hma1.2p1_1385F.1_g279670 Hydrangea macrophylla HOM05D004157 ORTHO05D004860 1.2e-101 373.6 258 72.5
Lsat_1_v5_gn_3_45521 Lactuca sativa HOM05D004157 ORTHO05D004860 2.1e-101 372.9 250 75.6
Sc18g0006720 Simmondsia chinensis HOM05D004157 ORTHO05D004860 3.6e-101 372.1 259 73.0
HPP92_002547 Vanilla planifolia HOM05D004157 ORTHO05D004860 8.0e-101 370.9 255 72.2
PSO541G4423 Papaver somniferum HOM05D004157 ORTHO05D004860 1.4e-100 370.2 258 71.3
Manes.04G078800 Manihot esculenta HOM05D004157 ORTHO05D004860 2.3e-100 369.4 231 78.4
PSO675G3214 Papaver somniferum HOM05D004157 ORTHO05D004860 2.3e-100 369.4 258 71.3
GSVIVG01024109001 Vitis vinifera HOM05D004157 ORTHO05D004860 3.0e-100 369.0 258 72.1
Aqoxy5G01458 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 5.2e-100 368.2 252 73.4
MSTRG.5432 Avicennia marina HOM05D004157 ORTHO05D004860 5.2e-100 368.2 261 70.1
Nn5g30153 Nelumbo nucifera HOM05D004157 ORTHO05D004860 5.2e-100 368.2 251 73.7
Prupe.8G159400 Prunus persica HOM05D004157 ORTHO05D004860 6.8e-100 367.9 259 71.0
Gorai.005G251900 Gossypium raimondii HOM05D004157 ORTHO05D004860 8.8e-100 367.5 264 70.5
Phvul.009G000700 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 1.2e-99 367.1 273 70.0
RcHm_v2.0_Chr6g0245651 Rosa chinensis HOM05D004157 ORTHO05D004860 1.5e-99 366.7 250 73.6
MD10G1116600 Malus domestica HOM05D004157 ORTHO05D004860 2.0e-99 366.3 252 72.2
unitig_0.g2353 Utricularia gibba HOM05D004157 ORTHO05D004860 3.4e-99 365.5 259 70.7
Gohir.A03G202800 Gossypium hirsutum HOM05D004157 ORTHO05D004860 4.4e-99 365.2 252 72.2
Gohir.D02G224100 Gossypium hirsutum HOM05D004157 ORTHO05D004860 4.4e-99 365.2 264 70.1
MELO3C013382.2 Cucumis melo HOM05D004157 ORTHO05D004860 5.7e-99 364.8 265 69.8
Migut.I00211 Erythranthe guttata HOM05D004157 ORTHO05D004860 7.5e-99 364.4 261 70.5
Os06g0112200 Oryza sativa ssp. japonica HOM05D004157 ORTHO05D004860 7.5e-99 364.4 258 69.8
HanXRQChr10g0294891 Helianthus annuus HOM05D004157 ORTHO05D004860 9.8e-99 364.0 257 71.2
vmacro17385 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 9.8e-99 364.0 261 73.2
ECA234G4736 Erigeron canadensis HOM05D004157 ORTHO05D004860 1.3e-98 363.6 256 72.3
Solyc01g111060.4 Solanum lycopersicum HOM05D004157 ORTHO05D004860 1.3e-98 363.6 247 74.1
COL.COLO4_17245 Corchorus olitorius HOM05D004157 ORTHO05D004860 1.7e-98 363.2 296 64.5
EL10Ac9g21458 Beta vulgaris HOM05D004157 ORTHO05D004860 2.2e-98 362.8 257 72.4
CsaV3_7G000760 Cucumis sativus L. HOM05D004157 ORTHO05D004860 2.2e-98 362.8 264 71.6
Peaxi162Scf00362g01054 Petunia axillaris HOM05D004157 ORTHO05D004860 3.7e-98 362.1 247 73.7
Sopen01g053120 Solanum pennellii HOM05D004157 ORTHO05D004860 3.7e-98 362.1 247 73.3
PGSC0003DMG400001636 Solanum tuberosum HOM05D004157 ORTHO05D004860 8.3e-98 360.9 247 73.7
Ah.01g009470 Amaranthus hybridus HOM05D004157 ORTHO05D004860 1.4e-97 360.1 276 68.1
FAN24G0875 Fragaria x ananassa HOM05D004157 ORTHO05D004860 1.4e-97 360.1 252 71.0
THA.LOC104807783 Tarenaya hassleriana HOM05D004157 ORTHO05D004860 1.8e-97 359.8 258 69.8
FAN20G1131 Fragaria x ananassa HOM05D004157 ORTHO05D004860 3.1e-97 359.0 252 71.4
FvH4_2g02150 Fragaria vesca HOM05D004157 ORTHO05D004860 4.1e-97 358.6 252 70.6
Eucgr.G01749 Eucalyptus grandis HOM05D004157 ORTHO05D004860 9.1e-97 357.5 261 70.1
Actinidia00586 Actinidia chinensis HOM05D004157 ORTHO05D004860 3.5e-96 355.5 263 71.1
Sed0001494 Sechium edule HOM05D000447 ORTHO05D000315 4.5e-96 355.1 232 76.3
Zm00001eb036610 Zea mays HOM05D004157 ORTHO05D004860 1.0e-95 354.0 245 70.6
PSO675G5417 Papaver somniferum HOM05D004157 ORTHO05D004860 1.3e-95 353.6 251 69.7
Lj5A185T60 Lonicera japonica HOM05D004157 ORTHO05D004860 2.9e-95 352.4 256 68.8
SGA_v2.0_scaffold80G25867 Striga asiatica HOM05D004157 ORTHO05D004860 5.0e-95 351.7 278 65.5
Sed0017382 Sechium edule HOM05D004157 ORTHO05D004860 8.6e-95 350.9 235 74.5
ClCG02G004360 Citrullus lanatus HOM05D000447 ORTHO05D000315 4.2e-94 348.6 229 76.0
PSO541G6022 Papaver somniferum HOM05D004157 ORTHO05D004860 4.2e-94 348.6 251 69.3
Thhalv10025990m.g Eutrema salsugineum HOM05D004157 ORTHO05D004860 7.2e-94 347.8 261 65.9
AL7G10670 Arabidopsis lyrata HOM05D004157 ORTHO05D004860 1.2e-93 347.1 262 65.3
CAN.G588.18 Capsicum annuum HOM05D004157 ORTHO05D004860 1.2e-93 347.1 236 73.7
Nitab4.5_0000283g0220 Nicotiana tabacum HOM05D004157 ORTHO05D004860 1.6e-93 346.7 252 71.8
unitig_21.g20017 Utricularia gibba HOM05D004157 ORTHO05D004860 2.1e-93 346.3 245 70.2
AT4G38800 Arabidopsis thaliana HOM05D004157 ORTHO05D004860 3.6e-93 345.5 247 67.2
THA.LOC104819635 Tarenaya hassleriana HOM05D004157 ORTHO05D004860 8.0e-93 344.4 252 67.9
CARHR247930 Cardamine hirsuta HOM05D004157 ORTHO05D004860 1.8e-92 343.2 261 65.1
DCAR_003693 Daucus carota HOM05D004157 ORTHO05D004860 2.3e-92 342.8 341 55.4
vmacro02241 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 2.3e-92 342.8 259 68.3
Oeu055643.1 Olea europaea HOM05D004157 ORTHO05D004860 5.2e-92 341.7 236 71.2
DCAR_028937 Daucus carota HOM05D004157 ORTHO05D004860 2.6e-91 339.3 250 67.2
Carub.0007s0065 Capsella rubella HOM05D004157 ORTHO05D004860 4.4e-91 338.6 253 66.0
BcaC01g00256 Brassica carinata HOM05D004157 ORTHO05D004860 5.7e-91 338.2 247 66.4
Sp7g32610 Schrenkiella parvula HOM05D004157 ORTHO05D004860 9.8e-91 337.4 251 66.9
Thhalv10026821m.g Eutrema salsugineum HOM05D004157 ORTHO05D004860 3.7e-90 335.5 251 66.9
Aqoxy2G00577 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 4.9e-90 335.1 252 67.1
BcaB03g12226 Brassica carinata HOM05D004157 ORTHO05D004860 1.1e-89 334.0 247 65.6
Zm00001eb175180 Zea mays HOM05D004157 ORTHO05D004860 1.8e-89 333.2 245 68.2
A08p24000 Brassica napus HOM05D004157 ORTHO05D004860 4.1e-89 332.0 253 64.4
C03p77330 Brassica napus HOM05D004157 ORTHO05D004860 4.1e-89 332.0 253 64.4
BraA08t34357Z Brassica rapa HOM05D004157 ORTHO05D004860 4.1e-89 332.0 266 62.0
Aa31LG6G16410 Aethionema arabicum HOM05D004157 ORTHO05D004860 5.4e-89 331.6 296 59.5
AL7G16370 Arabidopsis lyrata HOM05D004157 ORTHO05D004860 9.2e-89 330.9 251 64.9
Carub.0007s0546 Capsella rubella HOM05D004157 ORTHO05D004860 1.2e-88 330.5 253 63.6
AUR62010110 Chenopodium quinoa HOM05D004157 ORTHO05D004860 2.0e-88 329.7 327 57.8
A08p16520 Brassica napus HOM05D004157 ORTHO05D004860 2.7e-88 329.3 249 65.9
BolC3t19986H Brassica oleracea HOM05D004157 ORTHO05D004860 3.5e-88 328.9 261 62.8
Hund00051 Selenicereus undatus HOM05D004157 ORTHO05D004860 3.5e-88 328.9 213 75.6
CARHR243130 Cardamine hirsuta HOM05D004157 ORTHO05D004860 4.5e-88 328.6 251 65.7
Aa31LG2G15700 Aethionema arabicum HOM05D004157 ORTHO05D004860 5.9e-88 328.2 249 66.3
Lj9A389T64 Lonicera japonica HOM05D004157 ORTHO05D004860 5.9e-88 328.2 221 72.4
Duzib052G0280 Durio zibethinus HOM05D004157 ORTHO05D004860 2.3e-87 326.2 252 67.5
BcaC01g00866 Brassica carinata HOM05D004157 ORTHO05D004860 2.9e-87 325.9 249 65.1
Oeu002957.1 Olea europaea HOM05D004157 ORTHO05D004860 3.9e-87 325.5 213 74.6
BolC3t20826H Brassica oleracea HOM05D004157 ORTHO05D004860 8.6e-87 324.3 249 64.7
BcaB03g11807 Brassica carinata HOM05D004157 ORTHO05D004860 1.9e-86 323.2 249 64.7
ATR0089G001 Amborella trichopoda HOM05D004157 ORTHO05D004860 2.5e-86 322.8 213 73.2
C03p85360 Brassica napus HOM05D004157 ORTHO05D004860 4.3e-86 322.0 249 64.3
ATR0095G001 Amborella trichopoda HOM05D004157 ORTHO05D004860 1.2e-85 320.5 213 72.8
Duzib132G0743 Durio zibethinus HOM05D004157 ORTHO05D004860 2.8e-85 319.3 252 65.9
SHI05673 Sapria himalayana HOM05D004157 ORTHO05D004860 6.1e-85 318.2 212 72.2
PGR042G3985 Punica granatum HOM05D004157 ORTHO05D004860 5.2e-84 315.1 251 62.9
HanXRQChr11g0346651 Helianthus annuus HOM05D004157 ORTHO05D004860 1.5e-83 313.5 248 63.3
Ciclev10029225m.g Citrus clementina HOM05D004157 ORTHO05D004860 7.5e-83 311.2 251 65.3
CDE02G2528 Ceratophyllum demersum HOM05D004157 ORTHO05D004860 1.3e-82 310.5 272 58.1
Actinidia27843 Actinidia chinensis HOM05D004157 ORTHO05D004860 1.2e-80 303.9 237 67.5
Sp7g37020 Schrenkiella parvula HOM05D004157 ORTHO05D004860 3.9e-79 298.9 254 61.8
SGA_v2.0_scaffold32G13240 Striga asiatica HOM05D004157 ORTHO05D004860 2.5e-78 296.2 258 60.5
Lsat_1_v5_gn_1_62181 Lactuca sativa HOM05D004157 ORTHO05D004860 4.3e-78 295.4 240 60.0
vmacro22693 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 7.3e-78 294.7 307 54.1
Rhsim11G0186900 Rhododendron simsii HOM05D004157 ORTHO05D004860 2.3e-76 289.7 206 69.9
AT4G34840 Arabidopsis thaliana HOM05D004157 ORTHO05D004860 3.4e-75 285.8 204 67.6
Prupe.8G159500 Prunus persica HOM05D004157 ORTHO05D004860 7.5e-75 284.6 268 57.5
Pp3c1_20870 Physcomitrium patens HOM05D004157 ORTHO05D004860 9.8e-75 284.3 260 55.8
AUR62013103 Chenopodium quinoa HOM05D004157 ORTHO05D004860 3.7e-74 282.3 184 76.6
Cpa.g.sc37.201 Carica papaya HOM05D004157 ORTHO05D004860 2.4e-73 279.6 261 58.6
Eucgr.G01750 Eucalyptus grandis HOM05D004157 ORTHO05D004860 2.4e-73 279.6 252 56.3
Potri.009G128700 Populus trichocarpa HOM05D004157 ORTHO05D004860 7.0e-73 278.1 193 72.0
Pp3c14_1450 Physcomitrium patens HOM05D004157 ORTHO05D004860 2.7e-72 276.2 244 57.4
Rhsim05G0063700 Rhododendron simsii HOM05D004157 ORTHO05D004860 7.8e-72 274.6 196 75.5
Pp3c26_5320 Physcomitrium patens HOM05D004157 ORTHO05D004860 3.1e-68 262.7 235 56.6
SMO147G0350 Selaginella moellendorffii HOM05D004157 ORTHO05D004860 5.2e-68 261.9 254 54.3
SEGI_37242 Sequoiadendron giganteum HOM05D004157 ORTHO05D004860 5.8e-67 258.5 187 66.3
PGR042G2276 Punica granatum HOM05D004157 ORTHO05D004860 2.4e-65 253.1 261 54.4
Mapoly0026s0093 Marchantia polymorpha HOM05D004157 ORTHO05D004860 6.0e-64 248.4 244 51.6
BraA08t33620Z Brassica rapa HOM05D004157 ORTHO05D004860 7.3e-62 241.5 183 64.5
AagrBONN_evm.TU.Sc2ySwM_368.2286 Anthoceros agrestis HOM05D004157 ORTHO05D004860 3.6e-61 239.2 250 49.6
vmacro02237 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 8.4e-58 228.0 207 61.8
Nitab4.5_0000980g0360 Nicotiana tabacum HOM05D004157 ORTHO05D004860 1.1e-57 227.6 147 78.2
Dinv04975 Davidia involucrata HOM05D000600 ORTHO05D000432 4.6e-56 222.2 144 74.3
Rhsim11G0185600 Rhododendron simsii HOM05D004157 ORTHO05D004860 1.2e-51 207.6 194 58.2
MCO15G557 Micromonas commoda HOM05D004157 ORTHO05D004860 2.0e-51 206.8 246 46.7
Cre03.g162550 Chlamydomonas reinhardtii HOM05D004157 ORTHO05D004860 4.4e-51 205.7 236 46.2
Rhsim11G0186700 Rhododendron simsii HOM05D004157 ORTHO05D004860 8.1e-45 184.9 166 60.8
SalBow3G1540 Salvia bowleyana HOM05D004157 ORTHO05D004860 3.1e-44 183.0 122 76.2
Eucgr.L03396 Eucalyptus grandis HOM05D004157 ORTHO05D004860 1.8e-39 167.2 106 73.6
MBI09_g11914_MAGBIO Magnolia biondii HOM05D004157 ORTHO05D004860 5.8e-35 152.1 105 73.3
TAR625G0759 Trochodendron aralioides HOM05D004157 ORTHO05D004860 6.5e-34 148.7 100 77.0
Hma1.2p1_0032F.1_g019710 Hydrangea macrophylla HOM05D004157 ORTHO05D004860 7.9e-32 141.7 148 54.1
arahy.Tifrunner.gnm1.ann1.R1P6K1 Arachis hypogaea HOM05D004157 ORTHO05D004860 6.7e-31 138.7 179 46.9
PRCOL_00006969 Prasinoderma coloniale HOM05D004157 ORTHO05D004860 5.3e-28 129.0 241 36.1
C07p63580 Brassica napus HOM05D004157 ORTHO05D004860 1.2e-27 127.9 119 58.0
BolC7t46771H Brassica oleracea HOM05D004157 ORTHO05D004860 1.2e-27 127.9 119 58.0
Haze_02206 Corylus avellana HOM05D000447 ORTHO05D000315 1.2e-27 127.9 82 79.3
Medtr0173s0020 Medicago truncatula HOM05D004157 ORTHO05D004860 6.5e-26 122.1 82 76.8
Glyma.04G006001 Glycine max HOM05D004157 ORTHO05D004860 9.7e-22 108.2 68 72.1
SalBow3G3146 Salvia bowleyana HOM05D004157 ORTHO05D004860 1.4e-20 104.4 70 68.6
TAR625G0858 Trochodendron aralioides HOM05D004157 ORTHO05D004860 1.7e-18 97.4 157 41.4
Aqoxy6G02338 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 1.0e-15 88.2 67 67.2
vmacro02118 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 2.3e-15 87.0 82 56.1
Rhsim01G0041000 Rhododendron simsii HOM05D004157 ORTHO05D004860 5.7e-14 82.4 70 61.4
CBR_g20180 Chara braunii HOM05D004157 ORTHO05D004860 1.7e-13 80.9 99 45.5
Rhsim11G0185500 Rhododendron simsii HOM05D004157 ORTHO05D004860 4.2e-09 66.2 33 72.7
Ca_29445_v3 Cicer arietinum L. HOM05D004157 ORTHO05D148328 7.9e-08 62.0 217 25.3
HPP92_002565 Vanilla planifolia HOM05D004157 ORTHO05D004860 2.0e-06 57.4 123 36.6


User provided reference genes

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