Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.38SPRB Arachis hypogaea HOM05D003958 ORTHO05D004864 1.6e-177 625.9 310 100.0
arahy.Tifrunner.gnm1.ann1.CB8F3G Arachis hypogaea HOM05D003958 ORTHO05D004864 1.2e-175 619.8 310 99.0
Lj2g0025561 Lotus japonicus HOM05D003958 ORTHO05D004864 9.8e-151 537.0 309 85.1
Ca_00369_v3 Cicer arietinum L. HOM05D003958 ORTHO05D004864 1.7e-150 536.2 308 85.7
Phvul.011G172200 Phaseolus vulgaris HOM05D003958 ORTHO05D004864 2.2e-150 535.8 309 85.4
Lalb_Chr03g0031671 Lupinus albus HOM05D003958 ORTHO05D004864 2.9e-150 535.4 309 84.8
TPR.G11724 Trifolium pratense HOM05D003958 ORTHO05D004864 8.3e-150 533.9 309 85.1
Ca_00876_v3 Cicer arietinum L. HOM05D003958 ORTHO05D004864 1.0e-147 526.9 307 85.7
Lj3g0001252 Lotus japonicus HOM05D003958 ORTHO05D004864 3.0e-147 525.4 309 84.5
Psat1g092800 Pisum sativum HOM05D003958 ORTHO05D004864 1.2e-145 520.0 309 82.8
Psat1g202680 Pisum sativum HOM05D003958 ORTHO05D004864 4.7e-145 518.1 308 83.8
TPR.G33516 Trifolium pratense HOM05D003958 ORTHO05D004864 8.1e-145 517.3 305 84.6
Medtr6g047800 Medicago truncatula HOM05D003958 ORTHO05D004864 5.2e-144 514.6 308 83.4
Glyma.13G234900 Glycine max HOM05D003958 ORTHO05D004864 8.9e-144 513.8 312 81.7
Phvul.006G181700 Phaseolus vulgaris HOM05D003958 ORTHO05D004864 2.6e-143 512.3 311 81.7
arahy.Tifrunner.gnm1.ann1.8Z0BSJ Arachis hypogaea HOM05D003958 ORTHO05D004864 4.9e-142 508.1 307 84.7
VMungo0540G0822 Vigna mungo HOM05D003958 ORTHO05D004864 1.9e-141 506.1 310 80.0
CSS0020788 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 5.4e-141 504.6 311 81.7
CSS0020854 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 5.4e-141 504.6 311 81.7
Glyma.15G078000 Glycine max HOM05D003958 ORTHO05D004864 5.4e-141 504.6 311 80.4
Duzib147G0566 Durio zibethinus HOM05D003958 ORTHO05D004864 1.3e-139 500.0 310 80.0
Duzib147G0735 Durio zibethinus HOM05D003958 ORTHO05D004864 1.3e-139 500.0 310 80.0
Nn7g37719 Nelumbo nucifera HOM05D003958 ORTHO05D004864 1.3e-139 500.0 311 80.4
CANSAT64G0951 Cannabis sativa HOM05D003958 ORTHO05D004864 8.6e-139 497.3 314 78.0
QL02p075632 Quercus lobata HOM05D003958 ORTHO05D004864 1.9e-138 496.1 311 79.1
CiPaw.03G040700 Carya illinoinensis HOM05D003958 ORTHO05D004864 5.6e-138 494.6 311 77.8
Manes.17G113700 Manihot esculenta HOM05D003958 ORTHO05D004864 7.3e-138 494.2 310 79.7
Lj7A595G65 Lonicera japonica HOM05D003958 ORTHO05D004864 9.6e-138 493.8 311 79.1
Eucgr.I01766 Eucalyptus grandis HOM05D003958 ORTHO05D004864 2.1e-137 492.7 308 78.6
TAR622G1043 Trochodendron aralioides HOM05D003958 ORTHO05D004864 2.8e-137 492.3 312 79.5
Duzib147G0897 Durio zibethinus HOM05D003958 ORTHO05D004864 3.6e-137 491.9 310 79.7
Thecc.04G013700 Theobroma cacao HOM05D003958 ORTHO05D004864 1.1e-136 490.3 310 78.1
Atru.chr6.2341 Acer truncatum HOM05D003958 ORTHO05D004864 1.4e-136 490.0 312 76.6
MBI05_g22036_MAGBIO Magnolia biondii HOM05D003958 ORTHO05D004864 2.4e-136 489.2 312 78.2
CiPaw.04G026700 Carya illinoinensis HOM05D003958 ORTHO05D004864 4.0e-136 488.4 311 78.1
COL.COLO4_29053 Corchorus olitorius HOM05D003958 ORTHO05D004864 8.9e-136 487.3 310 77.7
Aqoxy3G00906 Aquilegia oxysepala HOM05D003958 ORTHO05D004864 1.5e-135 486.5 313 77.3
PSO832G3613 Papaver somniferum HOM05D003958 ORTHO05D004864 1.5e-135 486.5 312 78.5
Prupe.3G287900 Prunus persica HOM05D003958 ORTHO05D004864 2.6e-135 485.7 311 77.5
PSO063G1059 Papaver somniferum HOM05D003958 ORTHO05D004864 4.4e-135 485.0 312 78.5
Haze_14701 Corylus avellana HOM05D003958 ORTHO05D004864 5.8e-135 484.6 311 77.2
Sed0009763 Sechium edule HOM05D003958 ORTHO05D004864 7.6e-135 484.2 310 77.4
Gohir.D09G027100 Gossypium hirsutum HOM05D003958 ORTHO05D004864 2.9e-134 482.3 310 77.7
RcHm_v2.0_Chr2g0172551 Rosa chinensis HOM05D003958 ORTHO05D004864 2.9e-134 482.3 304 78.9
DCAR_009028 Daucus carota HOM05D003958 ORTHO05D004864 6.4e-134 481.1 310 77.1
vmacro18265 Vaccinium macrocarpon HOM05D003958 ORTHO05D004864 8.4e-134 480.7 330 74.8
ClCG01G008920 Citrullus lanatus HOM05D003958 ORTHO05D004864 1.1e-133 480.3 310 77.7
Gorai.006G031600 Gossypium raimondii HOM05D003958 ORTHO05D004864 1.4e-133 479.9 310 77.4
PGR054G0003 Punica granatum HOM05D003958 ORTHO05D004864 1.9e-133 479.6 310 76.1
FvH4_6g51011 Fragaria vesca HOM05D003958 ORTHO05D004864 3.2e-133 478.8 311 76.5
Cc02_g12190 Coffea canephora HOM05D003958 ORTHO05D004864 7.1e-133 477.6 311 75.9
Aqoxy2G00425 Aquilegia oxysepala HOM05D003958 ORTHO05D004864 9.3e-133 477.2 305 78.0
Oeu057051.1 Olea europaea HOM05D003958 ORTHO05D004864 9.3e-133 477.2 308 76.0
PGR119G1149 Punica granatum HOM05D003958 ORTHO05D004864 9.3e-133 477.2 310 75.8
CsaV3_1G037790 Cucumis sativus L. HOM05D003958 ORTHO05D004864 1.2e-132 476.9 310 77.4
Ciclev10016011m.g Citrus clementina HOM05D003958 ORTHO05D004864 2.1e-132 476.1 311 76.5
Lju41A38T12 Lonicera japonica HOM05D003958 ORTHO05D004864 2.1e-132 476.1 313 77.3
Gohir.A09G027800 Gossypium hirsutum HOM05D003958 ORTHO05D004864 3.5e-132 475.3 310 77.1
Hund02774 Selenicereus undatus HOM05D003958 ORTHO05D004864 6.0e-132 474.6 311 76.5
Gohir.D13G007800 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.0e-131 473.8 306 77.5
MELO3C021808.2 Cucumis melo HOM05D003958 ORTHO05D004864 1.3e-131 473.4 310 77.4
Sabra18G0098500 Salix brachista HOM05D003958 ORTHO05D004864 1.7e-131 473.0 310 75.5
MSTRG.3157 Avicennia marina HOM05D003958 ORTHO05D004864 2.3e-131 472.6 308 76.0
THA.LOC104802398 Tarenaya hassleriana HOM05D003958 ORTHO05D004864 2.3e-131 472.6 315 73.7
Aa31LG11G15350 Aethionema arabicum HOM05D003958 ORTHO05D004864 1.1e-130 470.3 320 73.4
Sabra18G0099100 Salix brachista HOM05D003958 ORTHO05D004864 1.9e-130 469.5 311 75.2
PGSC0003DMG400000483 Solanum tuberosum HOM05D003958 ORTHO05D004864 1.9e-130 469.5 310 76.5
CAN.G206.10 Capsicum annuum HOM05D003958 ORTHO05D004864 2.5e-130 469.2 310 76.5
Lsat_1_v5_gn_4_183181 Lactuca sativa HOM05D003958 ORTHO05D004864 3.3e-130 468.8 315 74.9
Potri.018G120500 Populus trichocarpa HOM05D003958 ORTHO05D004864 4.3e-130 468.4 311 76.2
Sopen02g031390 Solanum pennellii HOM05D003958 ORTHO05D004864 4.3e-130 468.4 310 75.8
Peaxi162Scf00129g01325 Petunia axillaris HOM05D003958 ORTHO05D004864 5.6e-130 468.0 310 75.8
Sabra18G0100500 Salix brachista HOM05D003958 ORTHO05D004864 5.6e-130 468.0 311 75.2
Cpa.g.sc108.31 Carica papaya HOM05D003958 ORTHO05D004864 2.8e-129 465.7 310 75.2
TWI12G0059 Tripterygium wilfordii HOM05D003958 ORTHO05D004864 2.8e-129 465.7 311 76.5
Nitab4.5_0002739g0040 Nicotiana tabacum HOM05D003958 ORTHO05D004864 3.6e-129 465.3 310 75.8
Nitab4.5_0008215g0010 Nicotiana tabacum HOM05D003958 ORTHO05D004864 3.6e-129 465.3 310 75.8
Migut.H00096 Erythranthe guttata HOM05D003958 ORTHO05D004864 6.2e-129 464.5 308 74.7
EL10Ac9g21169 Beta vulgaris HOM05D003958 ORTHO05D004864 1.1e-128 463.8 311 74.3
HanXRQChr09g0255001 Helianthus annuus HOM05D003958 ORTHO05D004864 2.4e-128 462.6 312 74.7
Thhalv10014133m.g Eutrema salsugineum HOM05D003958 ORTHO05D004864 6.9e-128 461.1 317 71.9
THA.LOC104821089 Tarenaya hassleriana HOM05D003958 ORTHO05D004864 6.9e-128 461.1 310 73.5
AL6G25360 Arabidopsis lyrata HOM05D003958 ORTHO05D004864 2.0e-127 459.5 317 71.6
Carub.0006s1277 Capsella rubella HOM05D003958 ORTHO05D004864 2.0e-127 459.5 319 71.5
AT5G14600 Arabidopsis thaliana HOM05D003958 ORTHO05D004864 9.9e-127 457.2 317 72.2
CDE06G0036 Ceratophyllum demersum HOM05D003958 ORTHO05D004864 2.2e-126 456.1 310 74.2
ECA232G3491 Erigeron canadensis HOM05D003958 ORTHO05D004864 2.2e-126 456.1 315 73.3
CARHR198720 Cardamine hirsuta HOM05D003958 ORTHO05D004864 3.8e-126 455.3 317 71.0
ATR0057G029 Amborella trichopoda HOM05D003958 ORTHO05D004864 3.5e-124 448.7 311 73.6
Sp6g29430 Schrenkiella parvula HOM05D003958 ORTHO05D004864 4.6e-124 448.4 315 71.1
Sc03g0007660 Simmondsia chinensis HOM05D003958 ORTHO05D004864 2.3e-123 446.0 312 71.8
C09p62510 Brassica napus HOM05D003958 ORTHO05D004864 3.9e-123 445.3 319 70.2
A10p24040 Brassica napus HOM05D003958 ORTHO05D004864 6.7e-123 444.5 319 69.9
AUR62002487 Chenopodium quinoa HOM05D003958 ORTHO05D004864 8.7e-123 444.1 332 69.3
BraA10t44467Z Brassica rapa HOM05D003958 ORTHO05D004864 1.5e-122 443.4 319 69.9
MD09G1029500 Malus domestica HOM05D003958 ORTHO05D004864 1.9e-122 443.0 281 79.4
Cfa007405 Carpinus fangiana HOM05D003958 ORTHO05D004864 7.4e-122 441.0 258 82.2
BolC9t59091H Brassica oleracea HOM05D003958 ORTHO05D004864 9.6e-122 440.7 326 68.4
BcaNung03113 Brassica carinata HOM05D003958 ORTHO05D004864 1.3e-121 440.3 320 69.7
Hma1.2p1_0858F.1_g229230 Hydrangea macrophylla HOM05D003958 ORTHO05D004864 2.1e-121 439.5 334 68.9
SGA_v2.0_scaffold196G40937 Striga asiatica HOM05D003958 ORTHO05D004864 6.2e-121 438.0 309 71.8
AUR62023705 Chenopodium quinoa HOM05D003958 ORTHO05D004864 8.1e-121 437.6 300 74.0
Sabra18G0101000 Salix brachista HOM05D003958 ORTHO05D004864 1.1e-120 437.2 281 76.5
FAN14G0618 Fragaria x ananassa HOM05D003958 ORTHO05D004864 1.3e-118 430.3 291 74.2
Zm00001eb071120 Zea mays HOM05D003958 ORTHO05D004864 2.1e-116 422.9 321 66.0
FAN09G1134 Fragaria x ananassa HOM05D003958 ORTHO05D004864 1.0e-115 420.6 269 77.3
Os04g0319600 Oryza sativa ssp. japonica HOM05D003958 ORTHO05D004864 1.3e-115 420.2 323 66.3
SEGI_01237 Sequoiadendron giganteum HOM05D003958 ORTHO05D004864 1.9e-114 416.4 322 65.5
BcaC03g13470 Brassica carinata HOM05D003958 ORTHO05D004864 3.8e-110 402.1 309 66.3
Sabra18G0098900 Salix brachista HOM05D003958 ORTHO05D004864 6.5e-110 401.4 262 74.8
Gorai.013G008200 Gossypium raimondii HOM05D003958 ORTHO05D004864 9.3e-109 397.5 306 67.6
MD17G1031500 Malus domestica HOM05D003958 ORTHO05D004864 2.2e-105 386.3 222 83.8
Medtr2g014590 Medicago truncatula HOM05D003958 ORTHO05D004864 4.8e-105 385.2 231 80.1
CSS0027303 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 8.2e-105 384.4 309 65.4
Pp3c18_5220 Physcomitrium patens HOM05D003958 ORTHO05D004864 5.0e-102 375.2 332 59.0
Dinv35088 Davidia involucrata HOM05D003958 ORTHO05D004864 3.2e-101 372.5 311 66.2
arahy.Tifrunner.gnm1.ann1.M5ZQAR Arachis hypogaea HOM05D003958 ORTHO05D004864 4.2e-101 372.1 226 85.0
arahy.Tifrunner.gnm1.ann1.Z5MU8N Arachis hypogaea HOM05D003958 ORTHO05D004864 9.3e-101 370.9 204 91.7
HPP92_013732 Vanilla planifolia HOM05D003958 ORTHO05D004864 3.6e-100 369.0 227 75.8
SMO361G0280 Selaginella moellendorffii HOM05D003958 ORTHO05D004864 1.8e-99 366.7 301 62.8
SMO361G0823 Selaginella moellendorffii HOM05D003958 ORTHO05D004864 2.3e-99 366.3 301 62.5
AagrBONN_evm.TU.Sc2ySwM_344.690 Anthoceros agrestis HOM05D003958 ORTHO05D004864 5.1e-99 365.2 308 60.4
Mapoly0053s0094 Marchantia polymorpha HOM05D003958 ORTHO05D004864 2.5e-98 362.8 337 57.3
CBR_g9110 Chara braunii HOM05D003958 ORTHO05D004864 4.7e-84 315.5 256 61.7
SGA_v2.0_scaffold34G13865 Striga asiatica HOM05D003958 ORTHO05D004864 3.3e-82 309.3 320 55.3
Atru.chr6.2249 Acer truncatum HOM05D003958 ORTHO05D004864 1.8e-75 287.0 162 85.8
unitig_62.g23558 Utricularia gibba HOM05D003958 ORTHO05D004864 4.0e-75 285.8 207 69.1
Cre05.g244236 Chlamydomonas reinhardtii HOM05D003958 ORTHO05D004864 2.0e-74 283.5 238 59.7
arahy.Tifrunner.gnm1.ann1.FV4QAS Arachis hypogaea HOM05D003958 ORTHO05D004864 2.6e-74 283.1 171 87.1
MCO10G191 Micromonas commoda HOM05D003958 ORTHO05D004864 1.8e-72 276.9 315 50.2
GSVIVG01032441001 Vitis vinifera HOM05D000462 ORTHO05D002607 1.2e-68 264.2 155 81.9
Ah.07g203270 Amaranthus hybridus HOM05D003958 ORTHO05D004864 8.3e-65 251.5 150 80.7
PRCOL_00006622 Prasinoderma coloniale HOM05D003958 ORTHO05D004864 9.1e-64 248.1 347 42.4
Eucgr.L02705 Eucalyptus grandis HOM05D003958 ORTHO05D004864 3.3e-61 239.6 170 69.4
Gohir.A10G243400 Gossypium hirsutum HOM05D003958 ORTHO05D004864 5.2e-59 232.3 134 84.3
Ah.07g203280 Amaranthus hybridus HOM05D003958 ORTHO05D004864 9.2e-56 221.5 162 67.9
Gohir.A03G000004 Gossypium hirsutum HOM05D003958 ORTHO05D004864 8.9e-51 204.9 112 89.3
Sopen06g018800 Solanum pennellii HOM05D003958 ORTHO05D004864 2.0e-50 203.8 131 77.9
Gohir.A01G232100 Gossypium hirsutum HOM05D003958 ORTHO05D004864 7.5e-50 201.8 121 81.0
Gohir.D11G349300 Gossypium hirsutum HOM05D003958 ORTHO05D004864 3.7e-49 199.5 121 79.3
Gorai.004G293900 Gossypium raimondii HOM05D003958 ORTHO05D004864 4.9e-49 199.1 121 79.3
Gorai.006G274500 Gossypium raimondii HOM05D003958 ORTHO05D004864 4.9e-49 199.1 121 79.3
Gohir.D08G275428 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.8e-48 197.2 121 78.5
Gorai.007G380200 Gossypium raimondii HOM05D003958 ORTHO05D004864 1.8e-48 197.2 116 82.8
Gohir.D09G250100 Gossypium hirsutum HOM05D003958 ORTHO05D004864 4.1e-48 196.1 118 80.5
Gohir.D01G222101 Gossypium hirsutum HOM05D003958 ORTHO05D004864 9.2e-48 194.9 118 80.5
Haze_26162 Corylus avellana HOM05D003958 ORTHO05D004864 3.5e-47 193.0 236 44.1
Gorai.N017600 Gossypium raimondii HOM05D003958 ORTHO05D004864 4.6e-47 192.6 118 78.8
Gohir.D03G178200 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.0e-46 191.4 118 78.0
BcaC01g04875 Brassica carinata HOM05D003958 ORTHO05D004864 2.1e-44 183.7 246 46.7
Gohir.A12G000201 Gossypium hirsutum HOM05D003958 ORTHO05D004864 2.0e-42 177.2 296 40.9
Gohir.A06G000101 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.9e-40 170.6 93 89.2
Gohir.1Z049515 Gossypium hirsutum HOM05D003958 ORTHO05D015143 2.1e-39 167.2 102 77.5
Gorai.006G275300 Gossypium raimondii HOM05D003958 ORTHO05D015143 3.5e-39 166.4 102 77.5
FAN14G4368 Fragaria x ananassa HOM05D000001 ORTHO05D000003 3.0e-38 163.3 174 51.7
Gorai.001G000100 Gossypium raimondii HOM05D003958 ORTHO05D004864 7.1e-32 142.1 84 79.8
Atru.chr6.2248 Acer truncatum HOM05D003958 ORTHO05D004864 3.9e-30 136.3 93 69.9
FAN05G2568 Fragaria x ananassa HOM05D003958 ORTHO05D004864 2.4e-27 127.1 135 51.9
C03p32750 Brassica napus HOM05D003958 ORTHO05D004864 6.4e-25 119.0 95 60.0
BolC3t15610H Brassica oleracea HOM05D003958 ORTHO05D004864 6.4e-25 119.0 95 60.0
Gohir.A09G249500 Gossypium hirsutum HOM05D003958 ORTHO05D004864 3.3e-21 106.7 64 79.7
Gohir.1Z049410 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.4e-19 101.3 64 76.6
CSS0019434 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 2.4e-19 100.5 74 73.0
Gorai.007G000600 Gossypium raimondii HOM05D001392 ORTHO05D014312 5.8e-18 95.9 72 68.1
Gorai.013G272500 Gossypium raimondii HOM05D003958 ORTHO05D004864 7.6e-18 95.5 93 59.1
Gohir.D11G176600 Gossypium hirsutum HOM05D003958 ORTHO05D004864 9.9e-18 95.1 93 58.1
Gohir.D07G000766 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.7e-17 94.4 93 59.1
Solyc06g053690.3 Solanum lycopersicum HOM05D003958 ORTHO05D004864 4.9e-17 92.8 62 71.0
FAN05G2311 Fragaria x ananassa HOM05D003958 ORTHO05D004864 1.6e-15 87.8 108 49.1
Gohir.D08G275100 Gossypium hirsutum HOM05D003958 ORTHO05D005872 2.7e-15 87.0 50 76.0
Gorai.N025700 Gossypium raimondii HOM05D003958 ORTHO05D005872 2.7e-15 87.0 50 76.0
Oeu056467.1 Olea europaea HOM05D003958 ORTHO05D004864 4.6e-15 86.3 61 65.6
Gohir.A02G000100 Gossypium hirsutum HOM05D003958 ORTHO05D005454 6.0e-15 85.9 47 76.6
Gohir.1Z049564 Gossypium hirsutum HOM05D003958 ORTHO05D004864 7.8e-15 85.5 50 74.0
Gohir.1Z049570 Gossypium hirsutum HOM05D003958 ORTHO05D005872 7.8e-15 85.5 50 74.0
Medtr2g014570 Medicago truncatula HOM05D003958 ORTHO05D004864 1.1e-13 81.6 63 65.1
Nitab4.5_0001556g0020 Nicotiana tabacum HOM05D003958 ORTHO05D004864 3.6e-12 76.6 79 58.2
AL4G39060 Arabidopsis lyrata HOM05D000001 ORTHO05D009069 2.2e-09 67.4 128 37.5
BcaC03g13467 Brassica carinata HOM05D002486 ORTHO05D002606 1.3e-06 58.2 156 31.4


User provided reference genes

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