Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.36UT5T Arachis hypogaea HOM05D000746 ORTHO05D000573 6.1e-35 150.2 73 100.0
arahy.Tifrunner.gnm1.ann1.6E0KX6 Arachis hypogaea HOM05D000746 ORTHO05D000573 2.6e-33 144.8 73 97.3
Glyma.06G071200 Glycine max HOM05D000746 ORTHO05D000573 2.1e-11 72.0 74 54.1
Nitab4.5_0000151g0280 Nicotiana tabacum HOM05D000746 ORTHO05D000573 3.6e-11 71.2 69 55.1
Nitab4.5_0003813g0030 Nicotiana tabacum HOM05D000746 ORTHO05D000573 3.6e-11 71.2 69 55.1
Glyma.04G069500 Glycine max HOM05D000746 ORTHO05D000573 6.1e-11 70.5 76 53.9
Peaxi162Scf00161g00089 Petunia axillaris HOM05D000746 ORTHO05D000573 1.8e-10 68.9 65 56.9
CAN.G98.13 Capsicum annuum HOM05D000746 ORTHO05D000573 2.3e-10 68.6 77 48.1
COL.COLO4_23992 Corchorus olitorius HOM05D000746 ORTHO05D000573 2.3e-10 68.6 78 47.4
Solyc08g066960.3 Solanum lycopersicum HOM05D000746 ORTHO05D000573 2.3e-10 68.6 69 50.7
Sopen08g020920 Solanum pennellii HOM05D000746 ORTHO05D000573 2.3e-10 68.6 69 50.7
BcaNung03947 Brassica carinata HOM05D000746 ORTHO05D000573 3.1e-10 68.2 68 54.4
PSO455G0139 Papaver somniferum HOM05D000746 ORTHO05D000573 3.1e-10 68.2 67 56.7
PGSC0003DMG400029090 Solanum tuberosum HOM05D000746 ORTHO05D000573 3.1e-10 68.2 69 50.7
Thecc.09G148400 Theobroma cacao HOM05D000746 ORTHO05D000573 3.1e-10 68.2 69 50.7
PSO170G1756 Papaver somniferum HOM05D000746 ORTHO05D000573 5.2e-10 67.4 67 56.7
BcaNung03594 Brassica carinata HOM05D000746 ORTHO05D000573 6.8e-10 67.0 68 54.4
A03p61460 Brassica napus HOM05D000746 ORTHO05D000573 6.8e-10 67.0 68 54.4
C07p59240 Brassica napus HOM05D000746 ORTHO05D000573 6.8e-10 67.0 68 54.4
BolC7t46371H Brassica oleracea HOM05D000746 ORTHO05D000573 6.8e-10 67.0 68 54.4
BraA03t15191Z Brassica rapa HOM05D000746 ORTHO05D000573 6.8e-10 67.0 68 54.4
Potri.018G031700 Populus trichocarpa HOM05D000746 ORTHO05D000573 8.9e-10 66.6 70 50.0
ECA232G4375 Erigeron canadensis HOM05D000746 ORTHO05D000573 1.2e-09 66.2 74 48.6
Medtr3g107730 Medicago truncatula HOM05D000746 ORTHO05D000573 1.2e-09 66.2 77 48.1
VMungo1309G0559 Vigna mungo HOM05D000746 ORTHO05D000573 1.2e-09 66.2 77 49.4
Peaxi162Scf00161g00913 Petunia axillaris HOM05D000746 ORTHO05D000573 1.5e-09 65.9 63 55.6
Aa31LG2G17430 Aethionema arabicum HOM05D000746 ORTHO05D000573 2.6e-09 65.1 78 51.3
Cfa013187 Carpinus fangiana HOM05D000746 ORTHO05D000573 3.4e-09 64.7 71 52.1
Gohir.A10G176500 Gossypium hirsutum HOM05D000746 ORTHO05D000573 4.4e-09 64.3 69 50.7
Gohir.D10G183200 Gossypium hirsutum HOM05D000746 ORTHO05D000573 4.4e-09 64.3 69 50.7
Gorai.011G205300 Gossypium raimondii HOM05D000746 ORTHO05D000573 4.4e-09 64.3 69 50.7
Sp7g30280 Schrenkiella parvula HOM05D000746 ORTHO05D000573 4.4e-09 64.3 81 50.6
arahy.Tifrunner.gnm1.ann1.HLLS2Z Arachis hypogaea HOM05D000746 ORTHO05D000573 5.8e-09 63.9 72 52.8
CARHR240430 Cardamine hirsuta HOM05D000746 ORTHO05D000573 5.8e-09 63.9 81 50.6
CsaV3_2G031820 Cucumis sativus L. HOM05D000746 ORTHO05D000573 5.8e-09 63.9 69 55.1
Thhalv10024599m.g Eutrema salsugineum HOM05D000746 ORTHO05D000573 5.8e-09 63.9 81 50.6
Hma1.2p1_0515F.1_g170320 Hydrangea macrophylla HOM05D000746 ORTHO05D000573 5.8e-09 63.9 71 49.3
arahy.Tifrunner.gnm1.ann1.BA35D7 Arachis hypogaea HOM05D000746 ORTHO05D000573 7.5e-09 63.5 72 52.8
Phvul.009G095800 Phaseolus vulgaris HOM05D000746 ORTHO05D000573 7.5e-09 63.5 76 47.4
TWI32G0769 Tripterygium wilfordii HOM05D000746 ORTHO05D000573 7.5e-09 63.5 81 46.9
AL7G19300 Arabidopsis lyrata HOM05D000746 ORTHO05D000573 9.8e-09 63.2 81 49.4
AT4G32510 Arabidopsis thaliana HOM05D000746 ORTHO05D000573 9.8e-09 63.2 81 49.4
MSTRG.9441 Avicennia marina HOM05D000746 ORTHO05D000573 9.8e-09 63.2 78 44.9
COL.COLO4_12872 Corchorus olitorius HOM05D000746 ORTHO05D000573 9.8e-09 63.2 77 49.4
Lsat_1_v5_gn_1_33641 Lactuca sativa HOM05D000746 ORTHO05D000573 9.8e-09 63.2 78 48.7
Nitab4.5_0000671g0200 Nicotiana tabacum HOM05D000746 ORTHO05D000573 9.8e-09 63.2 78 47.4
Potri.001G174500 Populus trichocarpa HOM05D000746 ORTHO05D000573 9.8e-09 63.2 78 47.4
Carub.0007s0807 Capsella rubella HOM05D000746 ORTHO05D000573 1.3e-08 62.8 85 45.9
Haze_21580 Corylus avellana HOM05D000746 ORTHO05D000573 1.3e-08 62.8 69 49.3
MD15G1119200 Malus domestica HOM05D000746 ORTHO05D000573 1.3e-08 62.8 73 54.8
Nitab4.5_0000410g0420 Nicotiana tabacum HOM05D000746 ORTHO05D000573 1.3e-08 62.8 78 47.4
THA.LOC104803826 Tarenaya hassleriana HOM05D000746 ORTHO05D000573 1.3e-08 62.8 78 50.0
TPR.G28551 Trifolium pratense HOM05D000746 ORTHO05D000573 1.3e-08 62.8 73 50.7
CAN.G438.87 Capsicum annuum HOM05D000746 ORTHO05D000573 1.7e-08 62.4 78 47.4
Gohir.D10G183301 Gossypium hirsutum HOM05D000746 ORTHO05D000573 1.7e-08 62.4 65 49.2
Actinidia15806 Actinidia chinensis HOM05D000746 ORTHO05D000573 2.2e-08 62.0 79 46.8
Migut.E01483 Erythranthe guttata HOM05D000746 ORTHO05D000573 2.2e-08 62.0 70 51.4
Psat5g027360 Pisum sativum HOM05D000746 ORTHO05D000573 2.2e-08 62.0 77 49.4
BcaC09g52040 Brassica carinata HOM05D000746 ORTHO05D000573 2.9e-08 61.6 65 53.8
CiPaw.01G243400 Carya illinoinensis HOM05D000746 ORTHO05D000573 2.9e-08 61.6 70 51.4
Manes.11G049055 Manihot esculenta HOM05D000746 ORTHO05D000573 2.9e-08 61.6 79 49.4
Nn2g11922 Nelumbo nucifera HOM05D000746 ORTHO05D000573 2.9e-08 61.6 71 50.7
TWI34G0502 Tripterygium wilfordii HOM05D000746 ORTHO05D000573 2.9e-08 61.6 70 50.0
Duzib150G1263 Durio zibethinus HOM05D000746 ORTHO05D000573 3.7e-08 61.2 70 51.4
ECA232G4782 Erigeron canadensis HOM05D000746 ORTHO05D000573 3.7e-08 61.2 74 45.9
Gorai.011G205400 Gossypium raimondii HOM05D000746 ORTHO05D000573 3.7e-08 61.2 65 47.7
Oeu052302.1 Olea europaea HOM05D000746 ORTHO05D000573 3.7e-08 61.2 69 50.7
Sc10g0005530 Simmondsia chinensis HOM05D000746 ORTHO05D000573 3.7e-08 61.2 76 47.4
Atru.chr7.2366 Acer truncatum HOM05D000746 ORTHO05D000573 4.9e-08 60.8 72 50.0
Potri.006G249800 Populus trichocarpa HOM05D000746 ORTHO05D000573 4.9e-08 60.8 67 50.7
TWI18G0141 Tripterygium wilfordii HOM05D000746 ORTHO05D000573 4.9e-08 60.8 70 48.6
GSVIVG01035800001 Vitis vinifera HOM05D000746 ORTHO05D000573 4.9e-08 60.8 71 47.9
QL05p027257 Quercus lobata HOM05D000746 ORTHO05D000573 6.4e-08 60.5 78 48.7
QL05p027365 Quercus lobata HOM05D000746 ORTHO05D000573 6.4e-08 60.5 78 48.7
Sabra18G0032700 Salix brachista HOM05D000746 ORTHO05D000573 6.4e-08 60.5 67 47.8
PGSC0003DMG400005695 Solanum tuberosum HOM05D000746 ORTHO05D000573 6.4e-08 60.5 79 46.8
SGA_v2.0_scaffold4G02192 Striga asiatica HOM05D000746 ORTHO05D000573 8.3e-08 60.1 75 50.7
TPR.G21339 Trifolium pratense HOM05D000746 ORTHO05D000573 8.3e-08 60.1 72 44.4
Aqoxy7G02023 Aquilegia oxysepala HOM05D000746 ORTHO05D000573 1.1e-07 59.7 70 48.6
FvH4_2g29710 Fragaria vesca HOM05D000746 ORTHO05D000573 1.1e-07 59.7 71 54.9
FAN20G0967 Fragaria x ananassa HOM05D000746 ORTHO05D000573 1.1e-07 59.7 71 54.9
FAN24G1667 Fragaria x ananassa HOM05D000746 ORTHO05D000573 1.1e-07 59.7 71 54.9
Lj1g0002158 Lotus japonicus HOM05D000746 ORTHO05D000573 1.1e-07 59.7 71 49.3
Oeu030199.1 Olea europaea HOM05D000746 ORTHO05D000573 1.1e-07 59.7 68 52.9
TAR626G1938 Trochodendron aralioides HOM05D000746 ORTHO05D000573 1.1e-07 59.7 76 47.4
CANSAT56G4118 Cannabis sativa HOM05D000746 ORTHO05D000573 1.4e-07 59.3 77 42.9
Duzib187G1924 Durio zibethinus HOM05D000746 ORTHO05D000573 1.4e-07 59.3 69 47.8
Lj3g0027086 Lotus japonicus HOM05D000746 ORTHO05D000573 1.4e-07 59.3 62 53.2
Oeu020093.1 Olea europaea HOM05D000746 ORTHO05D000573 1.4e-07 59.3 68 48.5
Ca_15714_v3 Cicer arietinum L. HOM05D000746 ORTHO05D000573 1.9e-07 58.9 78 47.4
Dinv11607 Davidia involucrata HOM05D000746 ORTHO05D000573 1.9e-07 58.9 80 47.5
Lj3g0012681 Lotus japonicus HOM05D000746 ORTHO05D000573 1.9e-07 58.9 73 45.2
Solyc03g120020.4 Solanum lycopersicum HOM05D000746 ORTHO05D000573 1.9e-07 58.9 78 46.2
Sopen03g038900 Solanum pennellii HOM05D000746 ORTHO05D000573 1.9e-07 58.9 75 45.3
MELO3C011232.2 Cucumis melo HOM05D000746 ORTHO05D000573 2.4e-07 58.5 67 52.2
Glyma.17G207700 Glycine max HOM05D000746 ORTHO05D000573 2.4e-07 58.5 71 47.9
Gohir.A08G236900 Gossypium hirsutum HOM05D000746 ORTHO05D000573 2.4e-07 58.5 65 49.2
Gorai.004G274500 Gossypium raimondii HOM05D000746 ORTHO05D000573 2.4e-07 58.5 65 49.2
Potri.003G059700 Populus trichocarpa HOM05D000746 ORTHO05D000573 2.4e-07 58.5 76 44.7
RcHm_v2.0_Chr6g0298721 Rosa chinensis HOM05D000746 ORTHO05D000573 2.4e-07 58.5 71 50.7
arahy.Tifrunner.gnm1.ann1.14QJPY Arachis hypogaea HOM05D000746 ORTHO05D000573 3.2e-07 58.2 70 50.0
A01p05880 Brassica napus HOM05D000746 ORTHO05D000573 3.2e-07 58.2 73 47.9
C01p06500 Brassica napus HOM05D000746 ORTHO05D000573 3.2e-07 58.2 73 47.9
BolC1t00644H Brassica oleracea HOM05D000746 ORTHO05D000573 3.2e-07 58.2 73 47.9
DCAR_025472 Daucus carota HOM05D000746 ORTHO05D000573 3.2e-07 58.2 72 45.8
FAN15G3763 Fragaria x ananassa HOM05D000746 ORTHO05D000573 3.2e-07 58.2 71 53.5
Lalb_Chr22g0351051 Lupinus albus HOM05D000746 ORTHO05D000573 3.2e-07 58.2 71 46.5
EL10Ac9g21958 Beta vulgaris HOM05D000746 ORTHO05D000573 4.1e-07 57.8 73 49.3
FAN27G1003 Fragaria x ananassa HOM05D000746 ORTHO05D000573 4.1e-07 57.8 54 61.1
MBI01_g34142_MAGBIO Magnolia biondii HOM05D000746 ORTHO05D000573 4.1e-07 57.8 74 44.6
Oeu020522.2 Olea europaea HOM05D000746 ORTHO05D000573 4.1e-07 57.8 68 45.6
Peaxi162Scf00015g00444 Petunia axillaris HOM05D000746 ORTHO05D000573 4.1e-07 57.8 75 46.7
Prupe.1G472500 Prunus persica HOM05D000746 ORTHO05D000573 4.1e-07 57.8 69 52.2
QL02p023191 Quercus lobata HOM05D000746 ORTHO05D000573 4.1e-07 57.8 72 44.4
SalBow8G1531 Salvia bowleyana HOM05D000746 ORTHO05D000573 4.1e-07 57.8 70 45.7
SalBow8G1636 Salvia bowleyana HOM05D000746 ORTHO05D000573 4.1e-07 57.8 70 45.7
PGSC0003DMG400028546 Solanum tuberosum HOM05D000746 ORTHO05D000573 4.1e-07 57.8 77 44.2
Eucgr.C02816 Eucalyptus grandis HOM05D000746 ORTHO05D000573 5.4e-07 57.4 70 47.1
Medtr1g011840 Medicago truncatula HOM05D000746 ORTHO05D000573 5.4e-07 57.4 67 47.8
QL02p087186 Quercus lobata HOM05D000746 ORTHO05D000573 5.4e-07 57.4 68 48.5
EL10Ac9g21944 Beta vulgaris HOM05D000746 ORTHO05D000573 7.0e-07 57.0 78 44.9
BraA01t00555Z Brassica rapa HOM05D000746 ORTHO05D000573 7.0e-07 57.0 76 46.1
Cfa002024 Carpinus fangiana HOM05D000746 ORTHO05D000573 7.0e-07 57.0 70 50.0
Haze_16502 Corylus avellana HOM05D000746 ORTHO05D000573 7.0e-07 57.0 70 48.6
Gohir.D08G257500 Gossypium hirsutum HOM05D000746 ORTHO05D000573 7.0e-07 57.0 65 49.2
HanXRQChr09g0274881 Helianthus annuus HOM05D000746 ORTHO05D000573 7.0e-07 57.0 75 46.7
Prupe.3G077900 Prunus persica HOM05D000746 ORTHO05D000573 7.0e-07 57.0 73 47.9
Sed0007663 Sechium edule HOM05D000746 ORTHO05D000573 7.0e-07 57.0 71 45.1
Thecc.06G075600 Theobroma cacao HOM05D000746 ORTHO05D000573 7.0e-07 57.0 78 44.9
TAR625G1277 Trochodendron aralioides HOM05D000746 ORTHO05D000573 7.0e-07 57.0 80 45.0
CARHR016010 Cardamine hirsuta HOM05D000746 ORTHO05D000573 9.2e-07 56.6 71 47.9
Cpa.g.sc334.2 Carica papaya HOM05D000746 ORTHO05D000573 9.2e-07 56.6 70 47.1
Ca_01090_v3 Cicer arietinum L. HOM05D000746 ORTHO05D000573 9.2e-07 56.6 75 44.0
Phvul.001G053300 Phaseolus vulgaris HOM05D000746 ORTHO05D000573 9.2e-07 56.6 69 49.3
Psat7g254880 Pisum sativum HOM05D000746 ORTHO05D000573 9.2e-07 56.6 60 50.0
Sed0004868 Sechium edule HOM05D000746 ORTHO05D000573 9.2e-07 56.6 64 50.0
Nn8g39355 Nelumbo nucifera HOM05D000746 ORTHO05D000573 1.2e-06 56.2 75 48.0
Actinidia04415 Actinidia chinensis HOM05D000746 ORTHO05D000573 1.6e-06 55.8 73 42.5
CSS0001353 Camellia sinensis var. sinensis HOM05D000746 ORTHO05D000573 1.6e-06 55.8 60 51.7
ClCG08G013090 Citrullus lanatus HOM05D000746 ORTHO05D000573 1.6e-06 55.8 67 50.7
Gohir.A05G009500 Gossypium hirsutum HOM05D000746 ORTHO05D000573 1.6e-06 55.8 67 46.3
Gohir.D05G010200 Gossypium hirsutum HOM05D000746 ORTHO05D000573 1.6e-06 55.8 67 46.3
Gorai.009G010600 Gossypium raimondii HOM05D000746 ORTHO05D000573 1.6e-06 55.8 67 46.3
Manes.03G017800 Manihot esculenta HOM05D000746 ORTHO05D000573 1.6e-06 55.8 71 47.9
Zm00001eb148970 Zea mays HOM05D000746 ORTHO05D000573 1.6e-06 55.8 71 45.1
BcaNung03222 Brassica carinata HOM05D000746 ORTHO05D000573 2.0e-06 55.5 71 42.3
Hma1.2p1_0000F.1_g000860 Hydrangea macrophylla HOM05D000746 ORTHO05D000573 2.0e-06 55.5 76 44.7
MD17G1202200 Malus domestica HOM05D000746 ORTHO05D000573 2.0e-06 55.5 74 50.0
Psat6g030000 Pisum sativum HOM05D000746 ORTHO05D000573 2.0e-06 55.5 70 44.3
THA.LOC104812491 Tarenaya hassleriana HOM05D000746 ORTHO05D000573 2.0e-06 55.5 76 43.4
TPR.G38624 Trifolium pratense HOM05D000746 ORTHO05D000573 2.0e-06 55.5 62 50.0
Carub.0001s1525 Capsella rubella HOM05D000746 ORTHO05D000573 2.7e-06 55.1 72 44.4
MELO3C012936.2 Cucumis melo HOM05D000746 ORTHO05D000573 2.7e-06 55.1 78 42.3
DCAR_025473 Daucus carota HOM05D000746 ORTHO05D000573 2.7e-06 55.1 72 44.4
Lsat_1_v5_gn_4_104681 Lactuca sativa HOM05D000746 ORTHO05D000573 2.7e-06 55.1 76 44.7
Lalb_Chr11g0063881 Lupinus albus HOM05D000746 ORTHO05D000573 2.7e-06 55.1 73 49.3
Manes.16G118700 Manihot esculenta HOM05D000746 ORTHO05D000573 2.7e-06 55.1 70 45.7
PGR044G1261 Punica granatum HOM05D000746 ORTHO05D000573 2.7e-06 55.1 73 46.6
Sed0024677 Sechium edule HOM05D000746 ORTHO05D000573 2.7e-06 55.1 70 47.1
PSO210G4943 Papaver somniferum HOM05D000746 ORTHO05D000573 3.5e-06 54.7 77 44.2
QL05p027312 Quercus lobata HOM05D000746 ORTHO05D000573 3.5e-06 54.7 78 46.2
Zm00001eb345700 Zea mays HOM05D000746 ORTHO05D000573 3.5e-06 54.7 67 46.3
Ca_12926_v3 Cicer arietinum L. HOM05D000746 ORTHO05D000573 4.6e-06 54.3 72 45.8
QL05p027183 Quercus lobata HOM05D000746 ORTHO05D000573 4.6e-06 54.3 78 46.2
Duzib160G0059 Durio zibethinus HOM05D000746 ORTHO05D000573 6.0e-06 53.9 79 41.8
Nitab4.5_0005786g0030 Nicotiana tabacum HOM05D000746 ORTHO05D000573 6.0e-06 53.9 63 47.6
RcHm_v2.0_Chr2g0136951 Rosa chinensis HOM05D000746 ORTHO05D000573 6.0e-06 53.9 74 47.3
Sp1g13820 Schrenkiella parvula HOM05D000746 ORTHO05D000573 6.0e-06 53.9 71 45.1
CAN.G395.38 Capsicum annuum HOM05D000746 ORTHO05D000573 7.8e-06 53.5 70 44.3
Cpa.g.sc10.202 Carica papaya HOM05D000746 ORTHO05D000573 7.8e-06 53.5 71 45.1
CsaV3_3G026630 Cucumis sativus L. HOM05D000746 ORTHO05D000573 7.8e-06 53.5 78 39.7
Glyma.13G362600 Glycine max HOM05D000746 ORTHO05D000573 7.8e-06 53.5 75 44.0
Lalb_Chr14g0373631 Lupinus albus HOM05D000746 ORTHO05D000573 7.8e-06 53.5 73 43.8
Os01g0175600 Oryza sativa ssp. japonica HOM05D000746 ORTHO05D000573 7.8e-06 53.5 59 50.8
VMungo0673G0001 Vigna mungo HOM05D000746 ORTHO05D000573 7.8e-06 53.5 79 44.3


User provided reference genes

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