Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.36T17X Arachis hypogaea HOM05D006476 ORTHO05D008178 9.3e-172 606.7 284 100.0
arahy.Tifrunner.gnm1.ann1.39JBYW Arachis hypogaea HOM05D006476 ORTHO05D008178 5.7e-145 517.7 261 93.1
arahy.Tifrunner.gnm1.ann1.86RN6H Arachis hypogaea HOM05D006476 ORTHO05D008178 6.3e-144 514.2 261 92.3
Glyma.01G124200 Glycine max HOM05D006476 ORTHO05D008178 2.7e-131 472.2 261 82.0
Lj3g0015173 Lotus japonicus HOM05D006476 ORTHO05D008178 3.0e-130 468.8 263 81.0
Phvul.010G065700 Phaseolus vulgaris HOM05D006476 ORTHO05D008178 8.8e-130 467.2 261 80.8
VMungo0331G1781 Vigna mungo HOM05D006476 ORTHO05D008178 5.7e-129 464.5 261 81.2
Lalb_Chr12g0207111 Lupinus albus HOM05D006476 ORTHO05D008178 1.8e-127 459.5 266 80.5
Prupe.6G283400 Prunus persica HOM05D006476 ORTHO05D008178 5.0e-125 451.4 257 80.5
RcHm_v2.0_Chr3g0461841 Rosa chinensis HOM05D006476 ORTHO05D008178 1.9e-124 449.5 263 76.8
Cpa.g.sc162.36 Carica papaya HOM05D006476 ORTHO05D008178 3.6e-123 445.3 257 79.4
CiPaw.10G160000 Carya illinoinensis HOM05D006476 ORTHO05D008178 3.6e-123 445.3 257 79.0
FAN09G2591 Fragaria x ananassa HOM05D006476 ORTHO05D008178 4.7e-123 444.9 263 76.8
FAN09G3668 Fragaria x ananassa HOM05D006476 ORTHO05D008178 4.7e-123 444.9 263 76.8
FvH4_6g10790 Fragaria vesca HOM05D006476 ORTHO05D008178 1.0e-122 443.7 263 76.4
FAN05G3786 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.0e-122 443.7 263 76.4
FAN05G4924 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.0e-122 443.7 263 76.4
Sed0000477 Sechium edule HOM05D006476 ORTHO05D008178 3.0e-122 442.2 262 75.2
FAN14G4129 Fragaria x ananassa HOM05D006476 ORTHO05D008178 4.0e-122 441.8 261 76.6
QL07p034180 Quercus lobata HOM05D006476 ORTHO05D008178 5.2e-122 441.4 258 78.7
MD12G1177900 Malus domestica HOM05D006476 ORTHO05D008178 6.7e-122 441.0 257 79.0
GSVIVG01030297001 Vitis vinifera HOM05D006476 ORTHO05D008178 1.5e-121 439.9 257 78.2
Thecc.05G008700 Theobroma cacao HOM05D006476 ORTHO05D008178 2.2e-120 436.0 257 76.3
Gohir.A01G229200 Gossypium hirsutum HOM05D006476 ORTHO05D008178 2.8e-120 435.6 257 75.9
Gorai.002G265900 Gossypium raimondii HOM05D006476 ORTHO05D008178 3.7e-120 435.3 257 75.9
Oeu038728.1 Olea europaea HOM05D006476 ORTHO05D008178 1.4e-119 433.3 261 76.6
PGR031G1226 Punica granatum HOM05D006476 ORTHO05D008178 1.4e-119 433.3 257 77.0
TAR633G1736 Trochodendron aralioides HOM05D006476 ORTHO05D008178 1.4e-119 433.3 258 76.4
Cfa017133 Carpinus fangiana HOM05D006476 ORTHO05D008178 1.8e-119 433.0 261 75.1
Nn2g10977 Nelumbo nucifera HOM05D006476 ORTHO05D008178 4.1e-119 431.8 257 77.0
Gohir.A04G095014 Gossypium hirsutum HOM05D006476 ORTHO05D008178 7.0e-119 431.0 257 74.7
ClCG10G022410 Citrullus lanatus HOM05D006476 ORTHO05D008178 9.1e-119 430.6 267 74.5
Potri.016G123900 Populus trichocarpa HOM05D006476 ORTHO05D008178 1.2e-118 430.3 261 75.1
Haze_21064 Corylus avellana HOM05D006476 ORTHO05D008178 1.6e-118 429.9 261 74.7
Gohir.D04G134700 Gossypium hirsutum HOM05D006476 ORTHO05D008178 2.0e-118 429.5 257 74.7
Sc07g0006480 Simmondsia chinensis HOM05D006476 ORTHO05D008178 2.6e-118 429.1 257 75.9
MSTRG.10202 Avicennia marina HOM05D006476 ORTHO05D008178 3.5e-118 428.7 257 75.5
Gohir.D01G219100 Gossypium hirsutum HOM05D006476 ORTHO05D008178 3.5e-118 428.7 257 75.1
Hma1.2p1_0479F.1_g161560 Hydrangea macrophylla HOM05D006476 ORTHO05D008178 3.5e-118 428.7 261 73.6
Gorai.012G118300 Gossypium raimondii HOM05D006476 ORTHO05D008178 4.5e-118 428.3 257 74.3
Atru.chr8.2316 Acer truncatum HOM05D006476 ORTHO05D008178 7.7e-118 427.6 261 72.8
Nitab4.5_0004676g0040 Nicotiana tabacum HOM05D006476 ORTHO05D008178 7.7e-118 427.6 257 75.5
CSS0013060 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 1.0e-117 427.2 257 74.3
CSS0023949 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 1.0e-117 427.2 257 74.3
AUR62030513 Chenopodium quinoa HOM05D006476 ORTHO05D008178 1.3e-117 426.8 257 74.3
Eucgr.A00607 Eucalyptus grandis HOM05D006476 ORTHO05D008178 2.9e-117 425.6 257 75.5
COL.COLO4_14474 Corchorus olitorius HOM05D006476 ORTHO05D008178 3.8e-117 425.2 255 74.9
Nitab4.5_0000230g0070 Nicotiana tabacum HOM05D006476 ORTHO05D008178 6.5e-117 424.5 257 75.1
MELO3C009137.2 Cucumis melo HOM05D006476 ORTHO05D008178 8.5e-117 424.1 257 74.7
Dinv10268 Davidia involucrata HOM05D006476 ORTHO05D008178 8.5e-117 424.1 254 75.2
AL6G10460 Arabidopsis lyrata HOM05D006476 ORTHO05D008178 1.1e-116 423.7 261 72.8
Cc06_g00920 Coffea canephora HOM05D006476 ORTHO05D008178 1.1e-116 423.7 259 73.7
Medtr4g014600 Medicago truncatula HOM05D006476 ORTHO05D008178 1.1e-116 423.7 263 73.0
CANSAT35G1014 Cannabis sativa HOM05D006476 ORTHO05D008178 1.9e-116 422.9 257 75.5
CARHR211940 Cardamine hirsuta HOM05D006476 ORTHO05D008178 1.9e-116 422.9 261 72.4
Duzib093G1646 Durio zibethinus HOM05D006476 ORTHO05D008178 3.2e-116 422.2 257 73.5
Manes.09G110300 Manihot esculenta HOM05D006476 ORTHO05D008178 3.2e-116 422.2 257 75.9
Solyc09g013100.3 Solanum lycopersicum HOM05D006476 ORTHO05D008178 4.2e-116 421.8 257 73.9
unitig_26.g9345 Utricularia gibba HOM05D006476 ORTHO05D008178 4.2e-116 421.8 258 74.4
Thhalv10013251m.g Eutrema salsugineum HOM05D006476 ORTHO05D008178 5.5e-116 421.4 261 72.4
Aa31LG1G23210 Aethionema arabicum HOM05D006476 ORTHO05D008178 7.2e-116 421.0 261 72.0
Sopen09g006940 Solanum pennellii HOM05D006476 ORTHO05D008178 7.2e-116 421.0 257 73.9
TWI53G1048 Tripterygium wilfordii HOM05D006476 ORTHO05D008178 1.6e-115 419.9 257 73.9
Carub.0006s0024 Capsella rubella HOM05D006476 ORTHO05D008178 2.1e-115 419.5 261 72.0
CsaV3_3G033460 Cucumis sativus L. HOM05D006476 ORTHO05D008178 2.1e-115 419.5 261 73.6
CAN.G1194.2 Capsicum annuum HOM05D006476 ORTHO05D008178 3.6e-115 418.7 257 73.9
Aqoxy1G01315 Aquilegia oxysepala HOM05D006476 ORTHO05D008178 4.7e-115 418.3 261 72.8
Sp6g40850 Schrenkiella parvula HOM05D006476 ORTHO05D008178 4.7e-115 418.3 261 71.6
AT5G01590 Arabidopsis thaliana HOM05D006476 ORTHO05D008178 6.1e-115 417.9 258 72.1
Ciclev10011480m.g Citrus clementina HOM05D006476 ORTHO05D008178 8.0e-115 417.5 257 73.5
Migut.L02041 Erythranthe guttata HOM05D006476 ORTHO05D008178 3.0e-114 415.6 252 74.2
BcaB01g06105 Brassica carinata HOM05D006476 ORTHO05D008178 4.0e-114 415.2 261 70.1
C03p00370 Brassica napus HOM05D006476 ORTHO05D008178 4.0e-114 415.2 261 70.1
BolC3t12605H Brassica oleracea HOM05D006476 ORTHO05D008178 4.0e-114 415.2 261 70.1
A03p00230 Brassica napus HOM05D006476 ORTHO05D008178 5.2e-114 414.8 261 70.1
BraA03t09413Z Brassica rapa HOM05D006476 ORTHO05D008178 5.2e-114 414.8 261 70.1
EL10Ac5g12509 Beta vulgaris HOM05D006476 ORTHO05D008178 1.2e-113 413.7 257 72.8
BcaB01g06237 Brassica carinata HOM05D006476 ORTHO05D008178 1.5e-113 413.3 261 70.1
ATR0789G002 Amborella trichopoda HOM05D006476 ORTHO05D008178 2.6e-113 412.5 257 73.2
HanXRQChr10g0287121 Helianthus annuus HOM05D006476 ORTHO05D008178 1.3e-112 410.2 263 70.7
Sabra16G0118700 Salix brachista HOM05D006476 ORTHO05D008178 1.3e-112 410.2 290 65.5
Ca_20338_v3 Cicer arietinum L. HOM05D006476 ORTHO05D008178 1.7e-112 409.8 261 73.2
PSO765G0213 Papaver somniferum HOM05D006476 ORTHO05D008178 1.7e-112 409.8 258 72.5
THA.LOC104816184 Tarenaya hassleriana HOM05D006476 ORTHO05D008178 1.7e-112 409.8 258 71.7
CDE04G2527 Ceratophyllum demersum HOM05D006476 ORTHO05D008178 2.2e-112 409.5 256 71.9
CAN.G168.26 Capsicum annuum HOM05D006476 ORTHO05D008178 3.7e-112 408.7 257 72.0
TPR.G5241 Trifolium pratense HOM05D006476 ORTHO05D008178 6.3e-112 407.9 258 72.9
PSO349G0327 Papaver somniferum HOM05D006476 ORTHO05D008178 8.3e-112 407.5 258 72.5
Ah.12g058950 Amaranthus hybridus HOM05D006476 ORTHO05D008178 1.1e-111 407.1 263 70.0
ECA247G0212 Erigeron canadensis HOM05D006476 ORTHO05D008178 3.1e-111 405.6 263 69.6
Lsat_1_v5_gn_9_37301 Lactuca sativa HOM05D006476 ORTHO05D008178 5.4e-111 404.8 263 70.3
Psat7g247200 Pisum sativum HOM05D006476 ORTHO05D008178 7.7e-110 401.0 253 72.3
Hund10946 Selenicereus undatus HOM05D006476 ORTHO05D008178 1.7e-109 399.8 257 68.5
PGSC0003DMG400029192 Solanum tuberosum HOM05D006476 ORTHO05D008178 5.5e-108 394.8 319 59.2
Lj3A863T42 Lonicera japonica HOM05D006476 ORTHO05D008178 6.1e-107 391.3 223 79.8
Actinidia29077 Actinidia chinensis HOM05D006476 ORTHO05D008178 1.7e-104 383.3 258 69.0
HPP92_001920 Vanilla planifolia HOM05D006476 ORTHO05D008178 4.1e-103 378.6 271 63.5
SGA_v2.0_scaffold110G31194 Striga asiatica HOM05D006476 ORTHO05D008178 7.7e-102 374.4 253 68.8
Peaxi162Scf01132g00347 Petunia axillaris HOM05D006476 ORTHO05D008178 8.9e-98 360.9 257 67.7
Dinv12144 Davidia involucrata HOM05D006476 ORTHO05D008178 4.7e-91 338.6 199 79.9
DCAR_018674 Daucus carota HOM05D006476 ORTHO05D008178 1.4e-90 337.0 232 68.1
Glyma.03G050400 Glycine max HOM05D006476 ORTHO05D008178 6.4e-88 328.2 161 93.2
Solyc09g015470.4 Solanum lycopersicum HOM05D006476 ORTHO05D008178 3.4e-81 305.8 257 56.8
Pp3c1_41280 Physcomitrium patens HOM05D006476 ORTHO05D008178 1.8e-74 283.5 257 51.4
SEGI_26269 Sequoiadendron giganteum HOM05D006476 ORTHO05D008178 2.6e-73 279.6 216 58.8
AagrBONN_evm.TU.Sc2ySwM_344.2114 Anthoceros agrestis HOM05D006476 ORTHO05D008178 3.7e-72 275.8 245 54.3
AUR62030780 Chenopodium quinoa HOM05D006476 ORTHO05D008178 1.9e-71 273.5 172 70.3
Mapoly0062s0099 Marchantia polymorpha HOM05D006476 ORTHO05D008178 3.2e-71 272.7 249 51.8
SMO364G0439 Selaginella moellendorffii HOM05D006476 ORTHO05D008178 8.1e-67 258.1 224 50.9
MD04G1164400 Malus domestica HOM05D006476 ORTHO05D008178 4.9e-56 222.2 120 85.0
Haze_21099 Corylus avellana HOM05D006476 ORTHO05D008178 3.1e-26 123.2 125 48.0
CBR_g7951 Chara braunii HOM05D006476 ORTHO05D008178 6.7e-21 105.5 227 30.4
ATR0810G038 Amborella trichopoda HOM05D006476 ORTHO05D008178 2.0e-17 94.0 67 53.7
RcHm_v2.0_Chr3g0461921 Rosa chinensis HOM05D006476 ORTHO05D008178 1.0e-13 81.6 53 62.3
Cre17.g727100 Chlamydomonas reinhardtii HOM05D006476 ORTHO05D008178 7.0e-10 68.9 69 43.5
MCO15G063 Micromonas commoda HOM05D006476 ORTHO05D008178 3.5e-09 66.6 68 39.7
BcaNung03295 Brassica carinata HOM05D006476 ORTHO05D008178 2.9e-08 63.5 58 39.7
C09p74660 Brassica napus HOM05D000872 ORTHO05D000777 2.9e-08 63.5 58 39.7
BolC9t60200H Brassica oleracea HOM05D006476 ORTHO05D008178 2.9e-08 63.5 58 39.7
PRCOL_00007100 Prasinoderma coloniale HOM05D006476 ORTHO05D008178 4.7e-06 56.2 99 28.3


User provided reference genes

Program Settings