Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.33PIHY Arachis hypogaea HOM05D009670 ORTHO05D010890 7.3e-224 780.4 445 100.0
arahy.Tifrunner.gnm1.ann1.81KKWU Arachis hypogaea HOM05D009670 ORTHO05D010890 7.4e-216 753.8 445 97.5
Lj6g0011843 Lotus japonicus HOM05D009670 ORTHO05D010890 2.5e-94 350.1 463 49.7
Ca_00413_v3 Cicer arietinum L. HOM05D009670 ORTHO05D010890 1.8e-92 344.0 464 54.7
Ca_30157_v3 Cicer arietinum L. HOM05D009670 ORTHO05D010890 1.8e-92 344.0 464 54.7
Glyma.15G079800 Glycine max HOM05D009670 ORTHO05D010890 1.1e-91 341.3 452 49.1
Medtr2g015330 Medicago truncatula HOM05D009670 ORTHO05D010890 6.5e-87 325.5 458 50.4
Phvul.006G178900 Phaseolus vulgaris HOM05D009670 ORTHO05D010890 1.2e-77 294.7 446 45.5
VMungo0540G1521 Vigna mungo HOM05D009670 ORTHO05D010890 1.3e-74 284.6 446 44.8
Lj1g0012311 Lotus japonicus HOM05D009670 ORTHO05D010890 5.3e-73 279.3 455 44.8
Lalb_Chr18g0059231 Lupinus albus HOM05D009670 ORTHO05D010890 6.9e-73 278.9 454 43.2
Lalb_Chr15g0089411 Lupinus albus HOM05D009670 ORTHO05D010890 2.9e-71 273.5 447 48.3
Lalb_Chr20g0121361 Lupinus albus HOM05D009670 ORTHO05D010890 1.1e-62 245.0 450 41.1
TPR.G11728 Trifolium pratense HOM05D009670 ORTHO05D010890 3.7e-58 229.9 315 49.2
Medtr4g048110 Medicago truncatula HOM05D009670 ORTHO05D010890 5.3e-57 226.1 455 40.0
Psat1g200600 Pisum sativum HOM05D009670 ORTHO05D010890 9.4e-54 215.3 472 38.6
arahy.Tifrunner.gnm1.ann1.6KS8DY Arachis hypogaea HOM05D009670 ORTHO05D010890 7.5e-35 152.5 88 84.1
CiPaw.09G066800 Carya illinoinensis HOM05D009670 ORTHO05D010890 5.6e-22 109.8 457 30.0
arahy.Tifrunner.gnm1.ann1.G0S8N9 Arachis hypogaea HOM05D009670 ORTHO05D010890 3.0e-15 87.4 51 82.4
Thecc.06G176400 Theobroma cacao HOM05D013066 ORTHO05D010890 1.4e-12 78.6 462 27.3
Cfa000566 Carpinus fangiana HOM05D038757 ORTHO05D010890 1.8e-12 78.2 233 33.0
Manes.17G052800 Manihot esculenta HOM05D013066 ORTHO05D010890 4.0e-12 77.0 469 29.9
Manes.16G035200 Manihot esculenta HOM05D013066 ORTHO05D006345 8.9e-12 75.9 472 26.7
Cpa.g.sc131.73 Carica papaya HOM05D006105 ORTHO05D006345 9.9e-11 72.4 254 29.9
GSVIVG01014239001 Vitis vinifera HOM05D006105 ORTHO05D006345 9.9e-11 72.4 264 32.6
Gohir.D05G159900 Gossypium hirsutum HOM05D013066 ORTHO05D010890 3.7e-10 70.5 375 28.5
Ca_04016_v3 Cicer arietinum L. HOM05D006105 ORTHO05D006345 6.4e-10 69.7 261 31.4
Gohir.A05G157001 Gossypium hirsutum HOM05D013066 ORTHO05D010890 6.4e-10 69.7 379 28.8
Actinidia35226 Actinidia chinensis HOM05D006105 ORTHO05D006345 1.9e-09 68.2 275 29.5
Cpa.g.sc7.22 Carica papaya HOM05D013066 ORTHO05D010890 4.1e-09 67.0 442 25.1
Dinv17387 Davidia involucrata HOM05D006105 ORTHO05D006345 5.4e-09 66.6 437 26.8
Haze_09360 Corylus avellana HOM05D006105 ORTHO05D006345 9.2e-09 65.9 437 28.1
Cfa019604 Carpinus fangiana HOM05D006105 ORTHO05D006345 1.2e-08 65.5 260 30.8
TWI38G0440 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 1.2e-08 65.5 267 29.2
Actinidia18787 Actinidia chinensis HOM05D006105 ORTHO05D006345 3.5e-08 63.9 274 30.7
Gorai.009G164800 Gossypium raimondii HOM05D013066 ORTHO05D010890 3.5e-08 63.9 377 27.6
QL08p027367 Quercus lobata HOM05D006105 ORTHO05D006345 3.5e-08 63.9 308 27.9
CiPaw.11G164300 Carya illinoinensis HOM05D006105 ORTHO05D006345 7.8e-08 62.8 154 35.1
Gorai.004G029900 Gossypium raimondii HOM05D006105 ORTHO05D006345 1.3e-07 62.0 270 28.1
Thecc.07G103600 Theobroma cacao HOM05D006105 ORTHO05D006345 2.3e-07 61.2 277 29.2
COL.COLO4_17616 Corchorus olitorius HOM05D006105 ORTHO05D006345 3.9e-07 60.5 470 31.3
Duzib213G0100 Durio zibethinus HOM05D006105 ORTHO05D006345 5.1e-07 60.1 259 26.3
Gohir.D08G032500 Gossypium hirsutum HOM05D006105 ORTHO05D006345 5.1e-07 60.1 270 28.1
Gohir.A08G021700 Gossypium hirsutum HOM05D006105 ORTHO05D006345 8.6e-07 59.3 270 27.4
TWI39G0145 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 8.6e-07 59.3 284 29.2
Manes.03G103501 Manihot esculenta HOM05D006105 ORTHO05D006345 1.5e-06 58.5 453 26.9
Rhsim04G0024000 Rhododendron simsii HOM05D006105 ORTHO05D006345 1.5e-06 58.5 283 27.6
Prupe.4G171200 Prunus persica HOM05D006105 ORTHO05D006345 2.5e-06 57.8 283 28.3
Gorai.002G064700 Gossypium raimondii HOM05D006105 ORTHO05D006345 7.3e-06 56.2 259 30.5


User provided reference genes

Program Settings