Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.2ZW1BF Arachis hypogaea HOM05D007696 ORTHO05D009719 2.5e-120 435.6 251 100.0
arahy.Tifrunner.gnm1.ann1.ISQN6X Arachis hypogaea HOM05D007696 ORTHO05D009719 9.9e-93 344.0 251 83.7
Lj3g0018148 Lotus japonicus HOM05D007696 ORTHO05D009719 3.5e-66 255.8 242 69.8
Phvul.011G012300 Phaseolus vulgaris HOM05D007696 ORTHO05D009719 1.3e-65 253.8 242 66.1
Lalb_Chr19g0140261 Lupinus albus HOM05D007696 ORTHO05D009719 1.8e-62 243.4 244 59.0
VMungo1127G1702 Vigna mungo HOM05D007696 ORTHO05D009719 9.0e-62 241.1 241 66.4
TPR.G30177 Trifolium pratense HOM05D007696 ORTHO05D009719 5.1e-57 225.3 199 64.3
Glyma.09G227800 Glycine max HOM05D007696 ORTHO05D009719 4.7e-50 202.2 207 66.2
Medtr0085s0020 Medicago truncatula HOM05D007696 ORTHO05D009719 7.7e-45 184.9 138 70.3
Psat7g166400 Pisum sativum HOM05D007696 ORTHO05D009719 5.0e-44 182.2 223 59.2
QL10p022430 Quercus lobata HOM05D007696 ORTHO05D009719 3.2e-43 179.5 238 48.7
GSVIVG01008244001 Vitis vinifera HOM05D007696 ORTHO05D009719 4.2e-43 179.1 242 48.3
FAN18G2008 Fragaria x ananassa HOM05D007696 ORTHO05D009719 1.6e-42 177.2 237 53.6
Atru.chr9.778 Acer truncatum HOM05D007696 ORTHO05D009719 1.4e-41 174.1 235 46.8
Lj9A429T50 Lonicera japonica HOM05D007696 ORTHO05D009719 2.3e-41 173.3 238 46.6
CiPaw.15G127500 Carya illinoinensis HOM05D007696 ORTHO05D009719 1.1e-40 171.0 238 50.8
Dinv07368 Davidia involucrata HOM05D007696 ORTHO05D009719 1.1e-40 171.0 184 64.1
Manes.01G020300 Manihot esculenta HOM05D007696 ORTHO05D009719 1.5e-40 170.6 236 47.0
Prupe.5G218000 Prunus persica HOM05D007696 ORTHO05D009719 5.7e-40 168.7 238 49.2
Cc04_g07460 Coffea canephora HOM05D007696 ORTHO05D009719 1.7e-39 167.2 238 45.8
FAN08G1182 Fragaria x ananassa HOM05D007696 ORTHO05D009719 3.7e-39 166.0 236 43.2
FAN13G0134 Fragaria x ananassa HOM05D007696 ORTHO05D009719 8.2e-39 164.9 236 43.2
RcHm_v2.0_Chr7g0184691 Rosa chinensis HOM05D007696 ORTHO05D009719 1.1e-38 164.5 236 44.1
FAN04G2461 Fragaria x ananassa HOM05D007696 ORTHO05D009719 1.4e-38 164.1 237 43.5
Actinidia39813 Actinidia chinensis HOM05D007696 ORTHO05D009719 3.1e-38 162.9 242 44.6
Potri.015G049800 Populus trichocarpa HOM05D007696 ORTHO05D009719 7.0e-38 161.8 243 43.6
Cfa019805 Carpinus fangiana HOM05D007696 ORTHO05D009719 1.6e-37 160.6 231 52.8
FvH4_5g12640 Fragaria vesca HOM05D007696 ORTHO05D009719 1.6e-37 160.6 237 43.5
vmacro17668 Vaccinium macrocarpon HOM05D007696 ORTHO05D009719 3.5e-37 159.5 241 49.8
MD14G1222400 Malus domestica HOM05D007696 ORTHO05D009719 4.5e-37 159.1 237 50.2
FAN18G3725 Fragaria x ananassa HOM05D007696 ORTHO05D009719 2.2e-36 156.8 237 43.5
TWI81G0276 Tripterygium wilfordii HOM05D007696 ORTHO05D009719 2.2e-36 156.8 238 44.5
CANSAT54G0455 Cannabis sativa HOM05D007696 ORTHO05D009719 3.0e-33 146.4 238 39.5
CANSAT54G2838 Cannabis sativa HOM05D007696 ORTHO05D009719 1.2e-32 144.4 238 39.5
ECA232G0656 Erigeron canadensis HOM05D007696 ORTHO05D009719 2.0e-32 143.7 238 38.7
Lsat_1_v5_gn_4_115821 Lactuca sativa HOM05D007696 ORTHO05D009719 9.8e-32 141.4 241 38.6
Aqoxy3G03910 Aquilegia oxysepala HOM05D007696 ORTHO05D009719 1.3e-31 141.0 236 41.9
Nn4g23733 Nelumbo nucifera HOM05D007696 ORTHO05D009719 1.3e-31 141.0 244 46.7
Ciclev10022427m.g Citrus clementina HOM05D007696 ORTHO05D009719 4.8e-31 139.0 207 42.5
COL.COLO4_16235 Corchorus olitorius HOM05D007696 ORTHO05D009719 8.3e-31 138.3 207 43.0
Sc04g0003700 Simmondsia chinensis HOM05D007696 ORTHO05D009719 2.7e-29 133.3 238 35.3
Gohir.A08G094200 Gossypium hirsutum HOM05D007696 ORTHO05D009719 2.2e-28 130.2 210 42.4
Gohir.D08G105400 Gossypium hirsutum HOM05D007696 ORTHO05D009719 1.5e-27 127.5 207 41.5
Gorai.004G112300 Gossypium raimondii HOM05D007696 ORTHO05D009719 1.5e-27 127.5 207 41.5
PSO063G6876 Papaver somniferum HOM05D007696 ORTHO05D009719 7.2e-27 125.2 236 43.2
Thecc.03G029300 Theobroma cacao HOM05D007696 ORTHO05D009719 9.4e-27 124.8 207 41.1
AUR62032195 Chenopodium quinoa HOM05D007696 ORTHO05D009719 4.7e-26 122.5 238 33.6
TAR622G0575 Trochodendron aralioides HOM05D007696 ORTHO05D009719 6.1e-26 122.1 207 41.1
Oeu055893.1 Olea europaea HOM05D007696 ORTHO05D009719 1.2e-24 117.9 207 38.6
Hma1.2p1_0340F.1_g129840 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 2.6e-24 116.7 97 63.9
Hma1.2p1_0340F.1_g129846 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 2.6e-24 116.7 97 63.9
Duzib068G0054 Durio zibethinus HOM05D007696 ORTHO05D009719 7.5e-24 115.2 207 37.7
AUR62036960 Chenopodium quinoa HOM05D007696 ORTHO05D009719 2.2e-23 113.6 239 33.9
CAN.G438.120 Capsicum annuum HOM05D007696 ORTHO05D009719 1.6e-21 107.5 207 44.0
MBI13_g27794_MAGBIO Magnolia biondii HOM05D007696 ORTHO05D009719 2.7e-21 106.7 213 36.6
Rhsim08G0136100 Rhododendron simsii HOM05D007696 ORTHO05D009719 7.7e-21 105.1 98 59.2
Eucgr.K02660 Eucalyptus grandis HOM05D007696 ORTHO05D009719 2.5e-19 100.1 213 33.8
HanXRQChr09g0269891 Helianthus annuus HOM05D007696 ORTHO05D009719 2.5e-19 100.1 256 32.4
AL2G14920 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 4.3e-19 99.4 204 43.1
Thhalv10027967m.g Eutrema salsugineum HOM05D007696 ORTHO05D009719 5.6e-19 99.0 204 34.8
CARHR051130 Cardamine hirsuta HOM05D007696 ORTHO05D009719 9.5e-19 98.2 204 40.2
THA.LOC104821847 Tarenaya hassleriana HOM05D007696 ORTHO05D009719 1.6e-18 97.4 204 33.8
BcaB01g01733 Brassica carinata HOM05D007696 ORTHO05D009719 8.0e-18 95.1 204 32.8
EL10Ac5g11256 Beta vulgaris HOM05D007696 ORTHO05D009719 1.4e-17 94.4 242 34.7
AT1G61415 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 1.8e-17 94.0 204 38.7
Sabra15G0078100 Salix brachista HOM05D007696 ORTHO05D009719 6.8e-17 92.0 100 51.0
A09p26940 Brassica napus HOM05D007696 ORTHO05D009719 1.2e-16 91.3 204 40.2
BraA09t38264Z Brassica rapa HOM05D007696 ORTHO05D009719 1.2e-16 91.3 204 40.2
Hund10004 Selenicereus undatus HOM05D007696 ORTHO05D009719 1.2e-16 91.3 184 37.0
AL2G14870 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 2.6e-16 90.1 204 35.3
Sp7g03680 Schrenkiella parvula HOM05D007696 ORTHO05D009719 2.6e-16 90.1 204 32.4
Carub.0002s0377 Capsella rubella HOM05D007696 ORTHO05D009719 1.1e-14 84.7 204 40.7
BcaC04g21230 Brassica carinata HOM05D007696 ORTHO05D009719 5.4e-14 82.4 204 37.7
C09p34110 Brassica napus HOM05D007696 ORTHO05D009719 5.4e-14 82.4 204 37.7
BolC9t56248H Brassica oleracea HOM05D007696 ORTHO05D009719 5.4e-14 82.4 204 37.7
Zm00001eb347780 Zea mays HOM05D007696 ORTHO05D009719 2.3e-12 77.0 230 29.6
Os05g0275600 Oryza sativa ssp. japonica HOM05D007696 ORTHO05D009719 2.5e-11 73.6 239 32.2
Aa31LG8G5380 Aethionema arabicum HOM05D007696 ORTHO05D009719 1.2e-08 64.7 131 35.9
DCAR_011551 Daucus carota HOM05D007696 ORTHO05D009719 3.4e-08 63.2 141 34.0
Glyma.12G008800 Glycine max HOM05D007696 ORTHO05D009719 1.9e-06 57.4 44 65.9


User provided reference genes

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